RNA–Protein interactions for RNA: ENST00000511226.5

SPOCK3-216, Transcript of SPARC (osteonectin), cwcv and kazal like domains proteoglycan 3, humanhuman

TSL 5

Gene SPOCK3, Length 565 nt, Biotype nonsense mediated decay.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SPOCK3-216ENST00000511226 ALKQ9UM73 1620 aa29.22■■■□□ 2.27
SPOCK3-216ENST00000511226 NCOA2Q15596 1464 aa29.22■■■□□ 2.27
SPOCK3-216ENST00000511226 A2MP01023 1474 aa29.21■■■□□ 2.27
SPOCK3-216ENST00000511226 FBXO31Q5XUX0 539 aaPredicted RBP29.19■■■□□ 2.26
SPOCK3-216ENST00000511226 NEURL4Q96JN8 1562 aa29.18■■■□□ 2.26
SPOCK3-216ENST00000511226 CCNB3Q8WWL7 1395 aa29.17■■■□□ 2.26
SPOCK3-216ENST00000511226 DROSHAQ9NRR4 1374 aaKnown RBP eCLIP29.16■■■□□ 2.26
SPOCK3-216ENST00000511226 SYCP2Q9BX26 1530 aa29.15■■■□□ 2.26
SPOCK3-216ENST00000511226 TNRQ92752 1358 aa29.14■■■□□ 2.26
SPOCK3-216ENST00000511226 VWDEQ8N2E2 1590 aa29.14■■■□□ 2.26
SPOCK3-216ENST00000511226 ATP7AQ04656 1500 aa29.14■■■□□ 2.25
SPOCK3-216ENST00000511226 POTEAQ6S8J7 498 aa29.12■■■□□ 2.25
SPOCK3-216ENST00000511226 PPARGC1BQ86YN6 1023 aaKnown RBP29.12■■■□□ 2.25
SPOCK3-216ENST00000511226 THEMISQ8N1K5 641 aaPredicted RBP29.12■■■□□ 2.25
SPOCK3-216ENST00000511226 PLXNC1O60486 1568 aa29.12■■■□□ 2.25
SPOCK3-216ENST00000511226 POLR1AO95602 1720 aaPredicted RBP29.11■■■□□ 2.25
SPOCK3-216ENST00000511226 GPATCH8Q9UKJ3 1502 aaKnown RBP29.1■■■□□ 2.25
SPOCK3-216ENST00000511226 NPHP4O75161 1426 aaPredicted RBP29.1■■■□□ 2.25
SPOCK3-216ENST00000511226 CDC42BPAQ5VT25 1732 aa29.08■■■□□ 2.25
SPOCK3-216ENST00000511226 MYOM3Q5VTT5 1437 aa29.06■■■□□ 2.24
SPOCK3-216ENST00000511226 CFDP1Q9UEE9 299 aaPredicted RBP29.05■■■□□ 2.24
SPOCK3-216ENST00000511226 LRRC7Q96NW7 1537 aa29.04■■■□□ 2.24
SPOCK3-216ENST00000511226 MIA2Q96PC5 1412 aa29.04■■■□□ 2.24
SPOCK3-216ENST00000511226 KIAA1107Q9UPP5 1409 aa29.03■■■□□ 2.24
SPOCK3-216ENST00000511226 INO80Q9ULG1 1556 aaPredicted RBP29.01■■■□□ 2.23
SPOCK3-216ENST00000511226 MED14O60244 1454 aa29■■■□□ 2.23
SPOCK3-216ENST00000511226 KIF3BO15066 747 aa28.97■■■□□ 2.23
SPOCK3-216ENST00000511226 PLEKHH2Q8IVE3 1493 aa28.97■■■□□ 2.23
SPOCK3-216ENST00000511226 FGD6Q6ZV73 1430 aa28.95■■■□□ 2.23
SPOCK3-216ENST00000511226 FAM135AQ9P2D6 1515 aa28.95■■■□□ 2.23
SPOCK3-216ENST00000511226 WASHC2CQ9Y4E1 1318 aa28.94■■■□□ 2.22
SPOCK3-216ENST00000511226 UGGT1Q9NYU2 1555 aa28.93■■■□□ 2.22
SPOCK3-216ENST00000511226 PZPP20742 1482 aa28.93■■■□□ 2.22
SPOCK3-216ENST00000511226 RNF17Q9BXT8 1623 aaKnown RBP28.93■■■□□ 2.22
SPOCK3-216ENST00000511226 DHX29Q7Z478 1369 aaKnown RBP28.92■■■□□ 2.22
SPOCK3-216ENST00000511226 STRCP1A6NGW2 1772 aa28.91■■■□□ 2.22
SPOCK3-216ENST00000511226 DEPDC5O75140 1603 aa28.91■■■□□ 2.22
SPOCK3-216ENST00000511226 NLRP1Q9C000 1473 aa28.9■■■□□ 2.22
SPOCK3-216ENST00000511226 ADGBQ8N7X0 1667 aa28.89■■■□□ 2.22
SPOCK3-216ENST00000511226 ZNF644Q9H582 1327 aaPredicted RBP28.89■■■□□ 2.21
SPOCK3-216ENST00000511226 IQGAP1P46940 1657 aa28.88■■■□□ 2.21
SPOCK3-216ENST00000511226 RRBP1Q9P2E9 1410 aaKnown RBP28.87■■■□□ 2.21
SPOCK3-216ENST00000511226 RSPH4AQ5TD94 716 aa28.86■■■□□ 2.21
SPOCK3-216ENST00000511226 PTPN23Q9H3S7 1636 aa28.86■■■□□ 2.21
SPOCK3-216ENST00000511226 CAMSAP2Q08AD1 1489 aa28.84■■■□□ 2.21
SPOCK3-216ENST00000511226 KDM5DQ9BY66 1539 aa28.83■■■□□ 2.21
SPOCK3-216ENST00000511226 SYNMO15061 1565 aa28.83■■■□□ 2.21
SPOCK3-216ENST00000511226 FAM135BQ49AJ0 1406 aa28.8■■■□□ 2.2
SPOCK3-216ENST00000511226 RTEL1-TNFRSF6BF6WH68 1400 aa28.79■■■□□ 2.2
SPOCK3-216ENST00000511226 FAM50AQ14320 339 aaKnown RBP28.79■■■□□ 2.2
SPOCK3-216ENST00000511226 SETD1AO15047 1707 aaKnown RBP28.77■■■□□ 2.2
SPOCK3-216ENST00000511226 UPF1Q92900 1129 aaKnown RBP eCLIP28.76■■■□□ 2.19
SPOCK3-216ENST00000511226 MBD5Q9P267 1494 aa28.75■■■□□ 2.19
SPOCK3-216ENST00000511226 ARHGEF5Q12774 1597 aa28.74■■■□□ 2.19
SPOCK3-216ENST00000511226 TXNDC2Q86VQ3 553 aa28.71■■■□□ 2.19
SPOCK3-216ENST00000511226 LTKP29376 864 aa28.7■■■□□ 2.18
SPOCK3-216ENST00000511226 TSPY4P0CV99 314 aa28.69■■■□□ 2.18
SPOCK3-216ENST00000511226 TSPY10P0CW01 314 aa28.69■■■□□ 2.18
SPOCK3-216ENST00000511226 CCDC141Q6ZP82 1450 aa28.69■■■□□ 2.18
SPOCK3-216ENST00000511226 SCAF11Q99590 1463 aaKnown RBP28.66■■■□□ 2.18
SPOCK3-216ENST00000511226 TRIM52Q96A61 297 aa28.65■■■□□ 2.18
SPOCK3-216ENST00000511226 ZC3H13Q5T200 1668 aaKnown RBP28.64■■■□□ 2.18
SPOCK3-216ENST00000511226 ABCC5O15440 1437 aa28.64■■■□□ 2.18
SPOCK3-216ENST00000511226 DAPK1P53355 1430 aa28.64■■■□□ 2.18
SPOCK3-216ENST00000511226 TMEM94Q12767 1356 aa28.63■■■□□ 2.17
SPOCK3-216ENST00000511226 RBM33Q96EV2 1170 aaKnown RBP28.63■■■□□ 2.17
SPOCK3-216ENST00000511226 XIRP1Q702N8 1843 aaKnown RBP28.62■■■□□ 2.17
SPOCK3-216ENST00000511226 TRIM26Q12899 539 aaPredicted RBP28.62■■■□□ 2.17
SPOCK3-216ENST00000511226 EID1Q9Y6B2 187 aa28.6■■■□□ 2.17
SPOCK3-216ENST00000511226 PROSER2Q86WR7 435 aaPredicted RBP28.59■■■□□ 2.17
SPOCK3-216ENST00000511226 ERVK-7P63135 1459 aa28.58■■■□□ 2.17
SPOCK3-216ENST00000511226 MAST1Q9Y2H9 1570 aa28.57■■■□□ 2.16
SPOCK3-216ENST00000511226 ROBO1Q9Y6N7 1651 aa28.57■■■□□ 2.16
SPOCK3-216ENST00000511226 JCADQ9P266 1359 aa28.56■■■□□ 2.16
SPOCK3-216ENST00000511226 CROCC2H7BZ55 1655 aa28.55■■■□□ 2.16
SPOCK3-216ENST00000511226 ITGAEP38570 1179 aa28.54■■■□□ 2.16
SPOCK3-216ENST00000511226 KCNA6P17658 529 aa28.53■■■□□ 2.16
SPOCK3-216ENST00000511226 MEX3CQ5U5Q3 659 aaKnown RBP28.53■■■□□ 2.16
SPOCK3-216ENST00000511226 ZNF772Q68DY9 489 aaPredicted RBP28.53■■■□□ 2.16
SPOCK3-216ENST00000511226 ABCC3O15438 1527 aa28.51■■■□□ 2.15
SPOCK3-216ENST00000511226 SLAIN2Q9P270 581 aa28.5■■■□□ 2.15
SPOCK3-216ENST00000511226 ARHGAP23Q9P227 1491 aa28.5■■■□□ 2.15
SPOCK3-216ENST00000511226 ROCK1Q13464 1354 aa28.5■■■□□ 2.15
SPOCK3-216ENST00000511226 ANKRD30AQ9BXX3 1397 aa28.5■■■□□ 2.15
SPOCK3-216ENST00000511226 UBR1Q8IWV7 1749 aa28.49■■■□□ 2.15
SPOCK3-216ENST00000511226 ADGRL2O95490 1459 aa28.49■■■□□ 2.15
SPOCK3-216ENST00000511226 CHIC2Q9UKJ5 165 aa28.48■■■□□ 2.15
SPOCK3-216ENST00000511226 SLIT1O75093 1534 aa28.48■■■□□ 2.15
SPOCK3-216ENST00000511226 SLC26A8Q96RN1 970 aa28.47■■■□□ 2.15
SPOCK3-216ENST00000511226 RXRBP28702 533 aa28.46■■■□□ 2.15
SPOCK3-216ENST00000511226 STAG3Q9UJ98 1225 aa28.45■■■□□ 2.14
SPOCK3-216ENST00000511226 MSH6P52701 1360 aa28.42■■■□□ 2.14
SPOCK3-216ENST00000511226 CFAP65Q6ZU64 1925 aaKnown RBP28.42■■■□□ 2.14
SPOCK3-216ENST00000511226 PHLPP1O60346 1717 aa28.41■■■□□ 2.14
SPOCK3-216ENST00000511226 TMEM2Q9UHN6 1383 aa28.4■■■□□ 2.14
SPOCK3-216ENST00000511226 SPATA31A6Q5VVP1 1343 aa28.4■■■□□ 2.14
SPOCK3-216ENST00000511226 LRP6O75581 1613 aa28.4■■■□□ 2.14
SPOCK3-216ENST00000511226 RRP7BPQ9NSQ0 103 aa28.38■■■□□ 2.13
SPOCK3-216ENST00000511226 KIF15Q9NS87 1388 aa28.37■■■□□ 2.13
SPOCK3-216ENST00000511226 PRDM15P57071 1507 aaPredicted RBP28.35■■■□□ 2.13
Retrieved 100 of 20,778 RNA–protein pairs in 33.6 ms