RNA–Protein interactions for RNA: ENST00000511019.1

TRIO-217, Transcript of trio Rho guanine nucleotide exchange factor, humanhuman

TSL 3

Gene TRIO, Length 430 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRIO-217ENST00000511019 CCDC141Q6ZP82 1450 aa13.18□□□□□ -0.3
TRIO-217ENST00000511019 UBAP1LF5GYI3 381 aa13.18□□□□□ -0.3
TRIO-217ENST00000511019 THEMISQ8N1K5 641 aaPredicted RBP13.17□□□□□ -0.3
TRIO-217ENST00000511019 CAMSAP2Q08AD1 1489 aa13.16□□□□□ -0.3
TRIO-217ENST00000511019 ANKLE2Q86XL3 938 aa13.16□□□□□ -0.3
TRIO-217ENST00000511019 TNRQ92752 1358 aa13.16□□□□□ -0.3
TRIO-217ENST00000511019 CEP170BQ9Y4F5 1589 aaPredicted RBP13.15□□□□□ -0.3
TRIO-217ENST00000511019 KANK4Q5T7N3 995 aaPredicted RBP13.15□□□□□ -0.3
TRIO-217ENST00000511019 A2ML1A8K2U0 1454 aa13.15□□□□□ -0.3
TRIO-217ENST00000511019 TCOF1Q13428 1488 aaKnown RBP13.15□□□□□ -0.3
TRIO-217ENST00000511019 MYO3AQ8NEV4 1616 aa13.14□□□□□ -0.31
TRIO-217ENST00000511019 VPS8Q8N3P4 1428 aa13.13□□□□□ -0.31
TRIO-217ENST00000511019 LRRC9Q6ZRR7 1453 aa13.13□□□□□ -0.31
TRIO-217ENST00000511019 ILDR2Q71H61 639 aa13.13□□□□□ -0.31
TRIO-217ENST00000511019 MIA2Q96PC5 1412 aa13.13□□□□□ -0.31
TRIO-217ENST00000511019 APLP2Q06481 763 aa13.12□□□□□ -0.31
TRIO-217ENST00000511019 PZPP20742 1482 aa13.11□□□□□ -0.31
TRIO-217ENST00000511019 KDM5DQ9BY66 1539 aa13.11□□□□□ -0.31
TRIO-217ENST00000511019 ZNF142P52746 1687 aaPredicted RBP13.11□□□□□ -0.31
TRIO-217ENST00000511019 DNMT1P26358 1616 aaKnown RBP13.1□□□□□ -0.31
TRIO-217ENST00000511019 DROSHAQ9NRR4 1374 aaKnown RBP eCLIP13.1□□□□□ -0.31
TRIO-217ENST00000511019 TOM1O60784 492 aa13.1□□□□□ -0.31
TRIO-217ENST00000511019 ARHGEF5Q12774 1597 aa13.1□□□□□ -0.31
TRIO-217ENST00000511019 FAM135AQ9P2D6 1515 aa13.08□□□□□ -0.31
TRIO-217ENST00000511019 SOCS7O14512 581 aa13.08□□□□□ -0.32
TRIO-217ENST00000511019 NLRP1Q9C000 1473 aa13.08□□□□□ -0.32
TRIO-217ENST00000511019 SCAF1Q9H7N4 1312 aaKnown RBP13.08□□□□□ -0.32
TRIO-217ENST00000511019 PIP4K2BP78356 416 aa13.07□□□□□ -0.32
TRIO-217ENST00000511019 MAP3K1Q13233 1512 aa13.07□□□□□ -0.32
TRIO-217ENST00000511019 MYOM3Q5VTT5 1437 aa13.06□□□□□ -0.32
TRIO-217ENST00000511019 RRP7BPQ9NSQ0 103 aa13.06□□□□□ -0.32
TRIO-217ENST00000511019 SHANK2Q9UPX8 1470 aa13.05□□□□□ -0.32
TRIO-217ENST00000511019 UGGT1Q9NYU2 1555 aa13.05□□□□□ -0.32
TRIO-217ENST00000511019 GRWD1Q9BQ67 446 aaKnown RBP eCLIP13.04□□□□□ -0.32
TRIO-217ENST00000511019 NPHP4O75161 1426 aaPredicted RBP13.04□□□□□ -0.32
TRIO-217ENST00000511019 MAST1Q9Y2H9 1570 aa13.03□□□□□ -0.32
TRIO-217ENST00000511019 CPS1P31327 1500 aa13.03□□□□□ -0.32
TRIO-217ENST00000511019 HSPA1LP34931 641 aa13.02□□□□□ -0.33
TRIO-217ENST00000511019 TXNDC2Q86VQ3 553 aa13.02□□□□□ -0.33
TRIO-217ENST00000511019 ABCC3O15438 1527 aa13.02□□□□□ -0.33
TRIO-217ENST00000511019 MED14O60244 1454 aa13.01□□□□□ -0.33
TRIO-217ENST00000511019 NEURL4Q96JN8 1562 aa13.01□□□□□ -0.33
TRIO-217ENST00000511019 SPATA31D1Q6ZQQ2 1576 aa13□□□□□ -0.33
TRIO-217ENST00000511019 DUOX2Q9NRD8 1548 aa13□□□□□ -0.33
TRIO-217ENST00000511019 ABCC5O15440 1437 aa13□□□□□ -0.33
TRIO-217ENST00000511019 KIF15Q9NS87 1388 aa13□□□□□ -0.33
TRIO-217ENST00000511019 EID1Q9Y6B2 187 aa13□□□□□ -0.33
TRIO-217ENST00000511019 ERVK-7P63135 1459 aa12.99□□□□□ -0.33
TRIO-217ENST00000511019 STAG3Q9UJ98 1225 aa12.99□□□□□ -0.33
TRIO-217ENST00000511019 CHIC2Q9UKJ5 165 aa12.99□□□□□ -0.33
TRIO-217ENST00000511019 RNF17Q9BXT8 1623 aaKnown RBP12.99□□□□□ -0.33
TRIO-217ENST00000511019 KANK1Q14678 1352 aa12.98□□□□□ -0.33
TRIO-217ENST00000511019 POLR1AO95602 1720 aaPredicted RBP12.98□□□□□ -0.33
TRIO-217ENST00000511019 EIF2AK4Q9P2K8 1649 aaKnown RBP12.98□□□□□ -0.33
TRIO-217ENST00000511019 LTKP29376 864 aa12.97□□□□□ -0.33
TRIO-217ENST00000511019 DEPDC5O75140 1603 aa12.97□□□□□ -0.33
TRIO-217ENST00000511019 ANKRD30AQ9BXX3 1397 aa12.96□□□□□ -0.33
TRIO-217ENST00000511019 ZC3H13Q5T200 1668 aaKnown RBP12.96□□□□□ -0.33
TRIO-217ENST00000511019 VWDEQ8N2E2 1590 aa12.96□□□□□ -0.33
TRIO-217ENST00000511019 ARHGAP31Q2M1Z3 1444 aa12.96□□□□□ -0.34
TRIO-217ENST00000511019 ERBINQ96RT1 1412 aa12.96□□□□□ -0.34
TRIO-217ENST00000511019 DAPK1P53355 1430 aa12.95□□□□□ -0.34
TRIO-217ENST00000511019 IDI1Q13907 227 aa12.94□□□□□ -0.34
TRIO-217ENST00000511019 MROH1Q8NDA8 1641 aa12.94□□□□□ -0.34
TRIO-217ENST00000511019 PTPN23Q9H3S7 1636 aa12.93□□□□□ -0.34
TRIO-217ENST00000511019 FAM50AQ14320 339 aaKnown RBP12.93□□□□□ -0.34
TRIO-217ENST00000511019 FGD6Q6ZV73 1430 aa12.93□□□□□ -0.34
TRIO-217ENST00000511019 SCAF11Q99590 1463 aaKnown RBP12.92□□□□□ -0.34
TRIO-217ENST00000511019 IQGAP1P46940 1657 aa12.92□□□□□ -0.34
TRIO-217ENST00000511019 LRRC7Q96NW7 1537 aa12.92□□□□□ -0.34
TRIO-217ENST00000511019 TMEM2Q9UHN6 1383 aa12.91□□□□□ -0.34
TRIO-217ENST00000511019 CEP152O94986 1710 aa12.91□□□□□ -0.34
TRIO-217ENST00000511019 BCANQ96GW7 911 aa12.9□□□□□ -0.34
TRIO-217ENST00000511019 SLC52A1Q9NWF4 448 aa12.9□□□□□ -0.34
TRIO-217ENST00000511019 ARHGAP23Q9P227 1491 aa12.9□□□□□ -0.34
TRIO-217ENST00000511019 CFAP65Q6ZU64 1925 aaKnown RBP12.9□□□□□ -0.35
TRIO-217ENST00000511019 SLIT1O75093 1534 aa12.89□□□□□ -0.35
TRIO-217ENST00000511019 PRDM15P57071 1507 aaPredicted RBP12.89□□□□□ -0.35
TRIO-217ENST00000511019 UBR1Q8IWV7 1749 aa12.88□□□□□ -0.35
TRIO-217ENST00000511019 KCNA6P17658 529 aa12.88□□□□□ -0.35
TRIO-217ENST00000511019 HDGFP51858 240 aaKnown RBP12.88□□□□□ -0.35
TRIO-217ENST00000511019 SLC26A8Q96RN1 970 aa12.88□□□□□ -0.35
TRIO-217ENST00000511019 PROSER2Q86WR7 435 aaPredicted RBP12.87□□□□□ -0.35
TRIO-217ENST00000511019 LMTK2Q8IWU2 1503 aa12.85□□□□□ -0.35
TRIO-217ENST00000511019 CROCC2H7BZ55 1655 aa12.85□□□□□ -0.35
TRIO-217ENST00000511019 ALKQ9UM73 1620 aa12.84□□□□□ -0.35
TRIO-217ENST00000511019 STRCP1A6NGW2 1772 aa12.84□□□□□ -0.35
TRIO-217ENST00000511019 MED1Q15648 1581 aaPredicted RBP12.84□□□□□ -0.35
TRIO-217ENST00000511019 PIK3C2BO00750 1634 aa12.84□□□□□ -0.35
TRIO-217ENST00000511019 EFCAB6Q5THR3 1501 aa12.83□□□□□ -0.35
TRIO-217ENST00000511019 NOS1P29475 1434 aa12.83□□□□□ -0.36
TRIO-217ENST00000511019 ANKRD50Q9ULJ7 1429 aa12.83□□□□□ -0.36
TRIO-217ENST00000511019 RBM33Q96EV2 1170 aaKnown RBP12.83□□□□□ -0.36
TRIO-217ENST00000511019 TMEM94Q12767 1356 aa12.82□□□□□ -0.36
TRIO-217ENST00000511019 SYNMO15061 1565 aa12.82□□□□□ -0.36
TRIO-217ENST00000511019 CHGAP10645 457 aaKnown RBP12.82□□□□□ -0.36
TRIO-217ENST00000511019 ADGRL2O95490 1459 aa12.82□□□□□ -0.36
TRIO-217ENST00000511019 PPP1R15AO75807 674 aaPredicted RBP12.81□□□□□ -0.36
TRIO-217ENST00000511019 FAM135BQ49AJ0 1406 aa12.8□□□□□ -0.36
TRIO-217ENST00000511019 ABCF1Q8NE71 845 aaKnown RBP eCLIP12.79□□□□□ -0.36
Retrieved 100 of 20,778 RNA–protein pairs in 10.1 ms