RNA–Protein interactions for RNA: ENST00000511009.1

MBD4-209, Transcript of methyl-CpG binding domain 4, DNA glycosylase, humanhuman

TSL 2

Gene MBD4, Length 530 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
MBD4-209ENST00000511009 PTGER2P43116 358 aa9.49□□□□□ -0.89
MBD4-209ENST00000511009 PDIA6Q15084 440 aa9.49□□□□□ -0.89
MBD4-209ENST00000511009 ANKRD13DQ6ZTN6 518 aa9.49□□□□□ -0.89
MBD4-209ENST00000511009 ERICH6Q7L0X2 663 aa9.49□□□□□ -0.89
MBD4-209ENST00000511009 ADAM33Q9BZ11 813 aa9.49□□□□□ -0.89
MBD4-209ENST00000511009 HRO43593 1189 aa9.48□□□□□ -0.89
MBD4-209ENST00000511009 TIMELESSQ9UNS1 1208 aa9.48□□□□□ -0.89
MBD4-209ENST00000511009 TK2O00142 265 aa9.47□□□□□ -0.89
MBD4-209ENST00000511009 ADGRD1Q6QNK2 874 aa9.47□□□□□ -0.89
MBD4-209ENST00000511009 ZDHHC16Q969W1 377 aa9.46□□□□□ -0.9
MBD4-209ENST00000511009 PHF14O94880 888 aa9.45□□□□□ -0.9
MBD4-209ENST00000511009 KCNK17Q96T54 332 aa9.45□□□□□ -0.9
MBD4-209ENST00000511009 SLC4A5Q9BY07 1137 aa9.44□□□□□ -0.9
MBD4-209ENST00000511009 SLC24A3Q9HC58 644 aa9.44□□□□□ -0.9
MBD4-209ENST00000511009 MYT1LQ9UL68 1186 aa9.44□□□□□ -0.9
MBD4-209ENST00000511009 BRPF1P55201 1214 aaPredicted RBP9.43□□□□□ -0.9
MBD4-209ENST00000511009 NEUROD2Q15784 382 aa9.43□□□□□ -0.9
MBD4-209ENST00000511009 ZBED2Q9BTP6 218 aa9.42□□□□□ -0.9
MBD4-209ENST00000511009 VPS9D1Q9Y2B5 631 aa9.42□□□□□ -0.9
MBD4-209ENST00000511009 SPDYE16A6NNV3 312 aaPredicted RBP9.41□□□□□ -0.9
MBD4-209ENST00000511009 PRIM1P49642 420 aaKnown RBP9.41□□□□□ -0.9
MBD4-209ENST00000511009 TYW1BQ6NUM6 668 aa9.41□□□□□ -0.9
MBD4-209ENST00000511009 RNF166Q96A37 237 aaPredicted RBP9.41□□□□□ -0.9
MBD4-209ENST00000511009 COL9A1P20849 921 aa9.4□□□□□ -0.9
MBD4-209ENST00000511009 PTPREP23469 700 aa9.4□□□□□ -0.9
MBD4-209ENST00000511009 FBXW7Q969H0 707 aa9.4□□□□□ -0.9
MBD4-209ENST00000511009 BHMG1C9JSJ3 638 aaPredicted RBP9.39□□□□□ -0.91
MBD4-209ENST00000511009 EPAS1Q99814 870 aa9.39□□□□□ -0.91
MBD4-209ENST00000511009 ZMYND10O75800 440 aa9.38□□□□□ -0.91
MBD4-209ENST00000511009 DDX12PQ92771 950 aa9.38□□□□□ -0.91
MBD4-209ENST00000511009 PPP1R3GB7ZBB8 358 aa9.37□□□□□ -0.91
MBD4-209ENST00000511009 C6orf132Q5T0Z8 1188 aa9.36□□□□□ -0.91
MBD4-209ENST00000511009 EN1Q05925 392 aaPredicted RBP9.35□□□□□ -0.91
MBD4-209ENST00000511009 C14orf37Q86TY3 774 aa9.35□□□□□ -0.91
MBD4-209ENST00000511009 GPIHBP1Q8IV16 184 aa9.35□□□□□ -0.91
MBD4-209ENST00000511009 OSBPP22059 807 aa9.34□□□□□ -0.91
MBD4-209ENST00000511009 MLLT3P42568 568 aaPredicted RBP9.33□□□□□ -0.92
MBD4-209ENST00000511009 RBM26Q5T8P6 1007 aaKnown RBP9.33□□□□□ -0.92
MBD4-209ENST00000511009 BARGINQ6ZT62 677 aa9.33□□□□□ -0.92
MBD4-209ENST00000511009 KRI1Q8N9T8 703 aaKnown RBP9.33□□□□□ -0.92
MBD4-209ENST00000511009 TSR1Q2NL82 804 aaKnown RBP9.32□□□□□ -0.92
MBD4-209ENST00000511009 PROX2Q3B8N5 592 aa9.32□□□□□ -0.92
MBD4-209ENST00000511009 KCNH8Q96L42 1107 aa9.32□□□□□ -0.92
MBD4-209ENST00000511009 RBM33Q96EV2 1170 aaKnown RBP9.3□□□□□ -0.92
MBD4-209ENST00000511009 AK7Q96M32 723 aa9.3□□□□□ -0.92
MBD4-209ENST00000511009 ONECUT3O60422 494 aaPredicted RBP9.28□□□□□ -0.92
MBD4-209ENST00000511009 RABGEF1Q9UJ41 708 aa9.28□□□□□ -0.92
MBD4-209ENST00000511009 GRXCR2A6NFK2 248 aa9.27□□□□□ -0.93
MBD4-209ENST00000511009 MAP3K7O43318 606 aa9.25□□□□□ -0.93
MBD4-209ENST00000511009 CDHR5Q9HBB8 845 aa9.25□□□□□ -0.93
MBD4-209ENST00000511009 NPDC1Q9NQX5 325 aaPredicted RBP9.25□□□□□ -0.93
MBD4-209ENST00000511009 DAXXQ9UER7 740 aaPredicted RBP9.25□□□□□ -0.93
MBD4-209ENST00000511009 FAM198AQ9UFP1 575 aa9.25□□□□□ -0.93
MBD4-209ENST00000511009 TRIM6-TRIM34B2RNG4 842 aa9.24□□□□□ -0.93
MBD4-209ENST00000511009 TSKSQ9UJT2 592 aa9.24□□□□□ -0.93
MBD4-209ENST00000511009 KIAA1468Q9P260 1216 aa9.23□□□□□ -0.93
MBD4-209ENST00000511009 C3orf80F5H4A9 247 aa9.22□□□□□ -0.93
MBD4-209ENST00000511009 KCTD12Q96CX2 325 aaKnown RBP9.22□□□□□ -0.93
MBD4-209ENST00000511009 MRPL50Q8N5N7 158 aaKnown RBP9.21□□□□□ -0.94
MBD4-209ENST00000511009 TTC13Q8NBP0 860 aa9.21□□□□□ -0.94
MBD4-209ENST00000511009 THSD4Q6ZMP0 1018 aa9.2□□□□□ -0.94
MBD4-209ENST00000511009 NBPF3Q9H094 633 aa9.2□□□□□ -0.94
MBD4-209ENST00000511009 GPBP1L1Q9HC44 474 aaPredicted RBP9.2□□□□□ -0.94
MBD4-209ENST00000511009 HCSTQ9UBK5 93 aa9.2□□□□□ -0.94
MBD4-209ENST00000511009 PRSS12P56730 875 aa9.19□□□□□ -0.94
MBD4-209ENST00000511009 LAPTM4BQ86VI4 370 aa9.19□□□□□ -0.94
MBD4-209ENST00000511009 CDCA7LQ96GN5 454 aa9.19□□□□□ -0.94
MBD4-209ENST00000511009 CERKQ8TCT0 537 aa9.18□□□□□ -0.94
MBD4-209ENST00000511009 NUTM2FA1L443 756 aa9.17□□□□□ -0.94
MBD4-209ENST00000511009 TRIM66O15016 1216 aa9.17□□□□□ -0.94
MBD4-209ENST00000511009 PDE4DQ08499 809 aa9.17□□□□□ -0.94
MBD4-209ENST00000511009 RBM27Q9P2N5 1060 aaKnown RBP9.17□□□□□ -0.94
MBD4-209ENST00000511009 KDM4CQ9H3R0 1056 aa9.16□□□□□ -0.94
MBD4-209ENST00000511009 SEPT9Q9UHD8 586 aaPredicted RBP9.16□□□□□ -0.94
MBD4-209ENST00000511009 IL27Q8NEV9 243 aa9.15□□□□□ -0.94
MBD4-209ENST00000511009 WNT2BQ93097 391 aa9.15□□□□□ -0.94
MBD4-209ENST00000511009 ZFRQ96KR1 1074 aaKnown RBP9.15□□□□□ -0.94
MBD4-209ENST00000511009 STAC3Q96MF2 364 aa9.15□□□□□ -0.94
MBD4-209ENST00000511009 FAM98CQ17RN3 349 aaKnown RBP9.14□□□□□ -0.95
MBD4-209ENST00000511009 PTGDRQ13258 359 aa9.13□□□□□ -0.95
MBD4-209ENST00000511009 ARXQ96QS3 562 aa9.13□□□□□ -0.95
MBD4-209ENST00000511009 MINK1Q8N4C8 1332 aaPredicted RBP9.12□□□□□ -0.95
MBD4-209ENST00000511009 SOWAHBA6NEL2 793 aa9.12□□□□□ -0.95
MBD4-209ENST00000511009 GPR37O15354 613 aa9.12□□□□□ -0.95
MBD4-209ENST00000511009 PADI6Q6TGC4 694 aa9.11□□□□□ -0.95
MBD4-209ENST00000511009 PACS2Q86VP3 889 aa9.11□□□□□ -0.95
MBD4-209ENST00000511009 SMAPO00193 183 aa9.1□□□□□ -0.95
MBD4-209ENST00000511009 BCAMP50895 628 aa9.1□□□□□ -0.95
MBD4-209ENST00000511009 MAP2K5Q13163 448 aa9.1□□□□□ -0.95
MBD4-209ENST00000511009 TATDN2Q93075 761 aa9.1□□□□□ -0.95
MBD4-209ENST00000511009 GOLGA8CPA6NN73 597 aa9.09□□□□□ -0.95
MBD4-209ENST00000511009 GNPATO15228 680 aa9.09□□□□□ -0.95
MBD4-209ENST00000511009 FCHSD2O94868 740 aa9.09□□□□□ -0.95
MBD4-209ENST00000511009 PTPN5P54829 565 aa9.09□□□□□ -0.95
MBD4-209ENST00000511009 ANKK1Q8NFD2 765 aa9.09□□□□□ -0.95
MBD4-209ENST00000511009 HIC1Q14526 733 aa9.08□□□□□ -0.96
MBD4-209ENST00000511009 CCDC102AQ96A19 550 aa9.08□□□□□ -0.96
MBD4-209ENST00000511009 EYA1Q99502 592 aa9.07□□□□□ -0.96
MBD4-209ENST00000511009 IRF6O14896 467 aa9.06□□□□□ -0.96
MBD4-209ENST00000511009 NUDT18Q6ZVK8 323 aa9.06□□□□□ -0.96
Retrieved 100 of 20,778 RNA–protein pairs in 10.9 ms