RNA–Protein interactions for RNA: ENST00000510679.1

SMN1-207, Transcript of survival of motor neuron 1, telomeric, humanhuman

TSL 3

Gene SMN1, Length 1,045 nt, Biotype processed transcript.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMN1-207ENST00000510679 SYCP2Q9BX26 1530 aa16.41■□□□□ 0.22
SMN1-207ENST00000510679 RSPH4AQ5TD94 716 aa16.41■□□□□ 0.22
SMN1-207ENST00000510679 BCORL1Q5H9F3 1711 aa16.39■□□□□ 0.21
SMN1-207ENST00000510679 STAG3Q9UJ98 1225 aa16.39■□□□□ 0.21
SMN1-207ENST00000510679 ADAMTSL3P82987 1691 aa16.38■□□□□ 0.21
SMN1-207ENST00000510679 KANK4Q5T7N3 995 aaPredicted RBP16.38■□□□□ 0.21
SMN1-207ENST00000510679 CHADLQ6NUI6 762 aa16.38■□□□□ 0.21
SMN1-207ENST00000510679 MLECQ14165 292 aa16.37■□□□□ 0.21
SMN1-207ENST00000510679 REREQ9P2R6 1566 aa16.37■□□□□ 0.21
SMN1-207ENST00000510679 PTPRMP28827 1452 aa16.36■□□□□ 0.21
SMN1-207ENST00000510679 DIP2CQ9Y2E4 1556 aa16.36■□□□□ 0.21
SMN1-207ENST00000510679 SP7Q8TDD2 431 aaPredicted RBP16.36■□□□□ 0.21
SMN1-207ENST00000510679 ZNF644Q9H582 1327 aaPredicted RBP16.36■□□□□ 0.21
SMN1-207ENST00000510679 MIA2Q96PC5 1412 aa16.34■□□□□ 0.21
SMN1-207ENST00000510679 MBD5Q9P267 1494 aa16.34■□□□□ 0.21
SMN1-207ENST00000510679 ESF1Q9H501 851 aaKnown RBP16.33■□□□□ 0.2
SMN1-207ENST00000510679 RTEL1-TNFRSF6BF6WH68 1400 aa16.33■□□□□ 0.2
SMN1-207ENST00000510679 MYOM3Q5VTT5 1437 aa16.33■□□□□ 0.2
SMN1-207ENST00000510679 CAMSAP2Q08AD1 1489 aa16.33■□□□□ 0.2
SMN1-207ENST00000510679 AGLP35573 1532 aa16.33■□□□□ 0.2
SMN1-207ENST00000510679 ATP7AQ04656 1500 aa16.33■□□□□ 0.2
SMN1-207ENST00000510679 ABCA6Q8N139 1617 aa16.33■□□□□ 0.2
SMN1-207ENST00000510679 MADDQ8WXG6 1647 aa16.33■□□□□ 0.2
SMN1-207ENST00000510679 TSPY4P0CV99 314 aa16.32■□□□□ 0.2
SMN1-207ENST00000510679 TSPY10P0CW01 314 aa16.32■□□□□ 0.2
SMN1-207ENST00000510679 CCDC141Q6ZP82 1450 aa16.32■□□□□ 0.2
SMN1-207ENST00000510679 KIDINS220Q9ULH0 1771 aa16.31■□□□□ 0.2
SMN1-207ENST00000510679 INO80Q9ULG1 1556 aaPredicted RBP16.29■□□□□ 0.2
SMN1-207ENST00000510679 A2MP01023 1474 aa16.28■□□□□ 0.2
SMN1-207ENST00000510679 SIGLEC1Q9BZZ2 1709 aa16.27■□□□□ 0.19
SMN1-207ENST00000510679 ARHGEF5Q12774 1597 aa16.26■□□□□ 0.19
SMN1-207ENST00000510679 RIMS1Q86UR5 1692 aaKnown RBP16.26■□□□□ 0.19
SMN1-207ENST00000510679 CNTLNQ9NXG0 1405 aa16.26■□□□□ 0.19
SMN1-207ENST00000510679 DHX29Q7Z478 1369 aaKnown RBP16.24■□□□□ 0.19
SMN1-207ENST00000510679 FER1L4A9Z1Z3 1794 aa16.23■□□□□ 0.19
SMN1-207ENST00000510679 PLXNC1O60486 1568 aa16.21■□□□□ 0.19
SMN1-207ENST00000510679 ADGBQ8N7X0 1667 aa16.21■□□□□ 0.19
SMN1-207ENST00000510679 FGD6Q6ZV73 1430 aa16.21■□□□□ 0.19
SMN1-207ENST00000510679 C19orf67A6NJJ6 358 aa16.2■□□□□ 0.18
SMN1-207ENST00000510679 GGT6Q6P531 493 aa16.2■□□□□ 0.18
SMN1-207ENST00000510679 EVX2Q03828 476 aa16.19■□□□□ 0.18
SMN1-207ENST00000510679 FARP1Q9Y4F1 1045 aaPredicted RBP16.18■□□□□ 0.18
SMN1-207ENST00000510679 MAST1Q9Y2H9 1570 aa16.17■□□□□ 0.18
SMN1-207ENST00000510679 TCOF1Q13428 1488 aaKnown RBP16.17■□□□□ 0.18
SMN1-207ENST00000510679 PTPN23Q9H3S7 1636 aa16.17■□□□□ 0.18
SMN1-207ENST00000510679 KIF3BO15066 747 aa16.17■□□□□ 0.18
SMN1-207ENST00000510679 CEBPAP49715 358 aaPredicted RBP16.17■□□□□ 0.18
SMN1-207ENST00000510679 PROM2Q8N271 834 aa16.17■□□□□ 0.18
SMN1-207ENST00000510679 SHANK2Q9UPX8 1470 aa16.16■□□□□ 0.18
SMN1-207ENST00000510679 LMTK3Q96Q04 1460 aa16.14■□□□□ 0.17
SMN1-207ENST00000510679 ZMYM3Q14202 1370 aa16.13■□□□□ 0.17
SMN1-207ENST00000510679 ABCC5O15440 1437 aa16.13■□□□□ 0.17
SMN1-207ENST00000510679 DAPK1P53355 1430 aa16.13■□□□□ 0.17
SMN1-207ENST00000510679 UHRF1BP1Q6BDS2 1440 aa16.13■□□□□ 0.17
SMN1-207ENST00000510679 FAM135AQ9P2D6 1515 aa16.13■□□□□ 0.17
SMN1-207ENST00000510679 FAM50AQ14320 339 aaKnown RBP16.12■□□□□ 0.17
SMN1-207ENST00000510679 CREBZFQ9NS37 354 aa16.12■□□□□ 0.17
SMN1-207ENST00000510679 NPATQ14207 1427 aa16.11■□□□□ 0.17
SMN1-207ENST00000510679 ANKRD30AQ9BXX3 1397 aa16.11■□□□□ 0.17
SMN1-207ENST00000510679 MROH2AA6NES4 1674 aa16.1■□□□□ 0.17
SMN1-207ENST00000510679 WASHC2CQ9Y4E1 1318 aa16.1■□□□□ 0.17
SMN1-207ENST00000510679 KIF15Q9NS87 1388 aa16.1■□□□□ 0.17
SMN1-207ENST00000510679 DUOX2Q9NRD8 1548 aa16.09■□□□□ 0.17
SMN1-207ENST00000510679 DNMT1P26358 1616 aaKnown RBP16.09■□□□□ 0.17
SMN1-207ENST00000510679 C3P01024 1663 aa16.08■□□□□ 0.16
SMN1-207ENST00000510679 HSPA2P54652 639 aa16.07■□□□□ 0.16
SMN1-207ENST00000510679 RRP7BPQ9NSQ0 103 aa16.07■□□□□ 0.16
SMN1-207ENST00000510679 ERBINQ96RT1 1412 aa16.07■□□□□ 0.16
SMN1-207ENST00000510679 KDM5DQ9BY66 1539 aa16.07■□□□□ 0.16
SMN1-207ENST00000510679 PREX1Q8TCU6 1659 aa16.07■□□□□ 0.16
SMN1-207ENST00000510679 EIF2AK4Q9P2K8 1649 aaKnown RBP16.06■□□□□ 0.16
SMN1-207ENST00000510679 CROCC2H7BZ55 1655 aa16.05■□□□□ 0.16
SMN1-207ENST00000510679 CHIC2Q9UKJ5 165 aa16.05■□□□□ 0.16
SMN1-207ENST00000510679 SETD1BQ9UPS6 1966 aaKnown RBP16.05■□□□□ 0.16
SMN1-207ENST00000510679 CLTCQ00610 1675 aaKnown RBP16.05■□□□□ 0.16
SMN1-207ENST00000510679 PTPRKQ15262 1439 aa16.03■□□□□ 0.16
SMN1-207ENST00000510679 DROSHAQ9NRR4 1374 aaKnown RBP eCLIP16.03■□□□□ 0.16
SMN1-207ENST00000510679 CD44P16070 742 aaKnown RBP16.03■□□□□ 0.16
SMN1-207ENST00000510679 ADGRL2O95490 1459 aa16.03■□□□□ 0.16
SMN1-207ENST00000510679 NCOA1Q15788 1441 aa16.02■□□□□ 0.16
SMN1-207ENST00000510679 KANK1Q14678 1352 aa16.01■□□□□ 0.15
SMN1-207ENST00000510679 RNF17Q9BXT8 1623 aaKnown RBP16.01■□□□□ 0.15
SMN1-207ENST00000510679 FKBP8Q14318 412 aa16.01■□□□□ 0.15
SMN1-207ENST00000510679 PPARGC1BQ86YN6 1023 aaKnown RBP16.01■□□□□ 0.15
SMN1-207ENST00000510679 PZPP20742 1482 aa16.01■□□□□ 0.15
SMN1-207ENST00000510679 ZC3H13Q5T200 1668 aaKnown RBP15.98■□□□□ 0.15
SMN1-207ENST00000510679 TNRQ92752 1358 aa15.98■□□□□ 0.15
SMN1-207ENST00000510679 ABCC3O15438 1527 aa15.97■□□□□ 0.15
SMN1-207ENST00000510679 ROCK1Q13464 1354 aa15.97■□□□□ 0.15
SMN1-207ENST00000510679 ANKRD50Q9ULJ7 1429 aa15.96■□□□□ 0.15
SMN1-207ENST00000510679 PRDM15P57071 1507 aaPredicted RBP15.96■□□□□ 0.15
SMN1-207ENST00000510679 FBXO31Q5XUX0 539 aaPredicted RBP15.95■□□□□ 0.14
SMN1-207ENST00000510679 MROH1Q8NDA8 1641 aa15.94■□□□□ 0.14
SMN1-207ENST00000510679 ARHGAP31Q2M1Z3 1444 aa15.94■□□□□ 0.14
SMN1-207ENST00000510679 RRBP1Q9P2E9 1410 aaKnown RBP15.94■□□□□ 0.14
SMN1-207ENST00000510679 A2ML1A8K2U0 1454 aa15.93■□□□□ 0.14
SMN1-207ENST00000510679 ITGAEP38570 1179 aa15.93■□□□□ 0.14
SMN1-207ENST00000510679 MYO3AQ8NEV4 1616 aa15.93■□□□□ 0.14
SMN1-207ENST00000510679 CEP170BQ9Y4F5 1589 aaPredicted RBP15.92■□□□□ 0.14
SMN1-207ENST00000510679 NLRP1Q9C000 1473 aa15.92■□□□□ 0.14
Retrieved 100 of 20,778 RNA–protein pairs in 13.4 ms