RNA–Protein interactions for RNA: ENST00000510676.6

PTCD2-208, Transcript of pentatricopeptide repeat domain 2, humanhuman

TSL 5

Gene PTCD2, Length 1,001 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTCD2-208ENST00000510676 DROSHAQ9NRR4 1374 aaKnown RBP eCLIP18.27■□□□□ 0.51
PTCD2-208ENST00000510676 ATP7AQ04656 1500 aa18.25■□□□□ 0.51
PTCD2-208ENST00000510676 GGT6Q6P531 493 aa18.25■□□□□ 0.51
PTCD2-208ENST00000510676 UPF1Q92900 1129 aaKnown RBP eCLIP18.25■□□□□ 0.51
PTCD2-208ENST00000510676 FAM135BQ49AJ0 1406 aa18.24■□□□□ 0.51
PTCD2-208ENST00000510676 THEMISQ8N1K5 641 aaPredicted RBP18.24■□□□□ 0.51
PTCD2-208ENST00000510676 INO80Q9ULG1 1556 aaPredicted RBP18.24■□□□□ 0.51
PTCD2-208ENST00000510676 IQGAP1P46940 1657 aa18.22■□□□□ 0.51
PTCD2-208ENST00000510676 ATP1B4Q9UN42 357 aaPredicted RBP18.22■□□□□ 0.51
PTCD2-208ENST00000510676 PZPP20742 1482 aa18.21■□□□□ 0.51
PTCD2-208ENST00000510676 NLRP1Q9C000 1473 aa18.2■□□□□ 0.5
PTCD2-208ENST00000510676 SYCP2Q9BX26 1530 aa18.2■□□□□ 0.5
PTCD2-208ENST00000510676 FBXO31Q5XUX0 539 aaPredicted RBP18.2■□□□□ 0.5
PTCD2-208ENST00000510676 CDC42BPAQ5VT25 1732 aa18.19■□□□□ 0.5
PTCD2-208ENST00000510676 KIAA1107Q9UPP5 1409 aa18.19■□□□□ 0.5
PTCD2-208ENST00000510676 UGGT1Q9NYU2 1555 aa18.18■□□□□ 0.5
PTCD2-208ENST00000510676 FAM135AQ9P2D6 1515 aa18.18■□□□□ 0.5
PTCD2-208ENST00000510676 EEA1Q15075 1411 aa18.16■□□□□ 0.5
PTCD2-208ENST00000510676 MIA2Q96PC5 1412 aa18.16■□□□□ 0.5
PTCD2-208ENST00000510676 LRRIQ1Q96JM4 1722 aa18.16■□□□□ 0.5
PTCD2-208ENST00000510676 HNRNPMP52272 730 aaKnown RBP eCLIP18.14■□□□□ 0.49
PTCD2-208ENST00000510676 ARHGAP35Q9NRY4 1499 aa18.14■□□□□ 0.49
PTCD2-208ENST00000510676 ADGBQ8N7X0 1667 aa18.13■□□□□ 0.49
PTCD2-208ENST00000510676 ZC3H13Q5T200 1668 aaKnown RBP18.12■□□□□ 0.49
PTCD2-208ENST00000510676 PLEKHH2Q8IVE3 1493 aa18.12■□□□□ 0.49
PTCD2-208ENST00000510676 XIRP1Q702N8 1843 aaKnown RBP18.12■□□□□ 0.49
PTCD2-208ENST00000510676 GPATCH8Q9UKJ3 1502 aaKnown RBP18.11■□□□□ 0.49
PTCD2-208ENST00000510676 KDM5DQ9BY66 1539 aa18.1■□□□□ 0.49
PTCD2-208ENST00000510676 ZNF777Q9ULD5 760 aaPredicted RBP18.1■□□□□ 0.49
PTCD2-208ENST00000510676 CCDC18Q5T9S5 1454 aa18.07■□□□□ 0.48
PTCD2-208ENST00000510676 DHX29Q7Z478 1369 aaKnown RBP18.07■□□□□ 0.48
PTCD2-208ENST00000510676 ROBO1Q9Y6N7 1651 aa18.06■□□□□ 0.48
PTCD2-208ENST00000510676 RTEL1-TNFRSF6BF6WH68 1400 aa18.04■□□□□ 0.48
PTCD2-208ENST00000510676 JCADQ9P266 1359 aa18.04■□□□□ 0.48
PTCD2-208ENST00000510676 CDK12Q9NYV4 1490 aaPredicted RBP18.02■□□□□ 0.48
PTCD2-208ENST00000510676 ZNF772Q68DY9 489 aaPredicted RBP18.02■□□□□ 0.48
PTCD2-208ENST00000510676 LRRC9Q6ZRR7 1453 aa18.01■□□□□ 0.47
PTCD2-208ENST00000510676 SCAF11Q99590 1463 aaKnown RBP18.01■□□□□ 0.47
PTCD2-208ENST00000510676 WASHC2CQ9Y4E1 1318 aa18.01■□□□□ 0.47
PTCD2-208ENST00000510676 CASKIN1Q8WXD9 1431 aa18.01■□□□□ 0.47
PTCD2-208ENST00000510676 TRIM52Q96A61 297 aa17.99■□□□□ 0.47
PTCD2-208ENST00000510676 CFDP1Q9UEE9 299 aaPredicted RBP17.99■□□□□ 0.47
PTCD2-208ENST00000510676 TMEM94Q12767 1356 aa17.99■□□□□ 0.47
PTCD2-208ENST00000510676 KIF3BO15066 747 aa17.98■□□□□ 0.47
PTCD2-208ENST00000510676 ARHGAP23Q9P227 1491 aa17.98■□□□□ 0.47
PTCD2-208ENST00000510676 MBD5Q9P267 1494 aa17.98■□□□□ 0.47
PTCD2-208ENST00000510676 LRP6O75581 1613 aa17.98■□□□□ 0.47
PTCD2-208ENST00000510676 MAP3K1Q13233 1512 aa17.98■□□□□ 0.47
PTCD2-208ENST00000510676 SLIT1O75093 1534 aa17.97■□□□□ 0.47
PTCD2-208ENST00000510676 LTKP29376 864 aa17.95■□□□□ 0.46
PTCD2-208ENST00000510676 SPATA31A6Q5VVP1 1343 aa17.95■□□□□ 0.46
PTCD2-208ENST00000510676 RXRBP28702 533 aa17.94■□□□□ 0.46
PTCD2-208ENST00000510676 NCOA2Q15596 1464 aa17.94■□□□□ 0.46
PTCD2-208ENST00000510676 PHLPP1O60346 1717 aa17.93■□□□□ 0.46
PTCD2-208ENST00000510676 UBR1Q8IWV7 1749 aa17.93■□□□□ 0.46
PTCD2-208ENST00000510676 FGD6Q6ZV73 1430 aa17.93■□□□□ 0.46
PTCD2-208ENST00000510676 COL16A1Q07092 1604 aaPredicted RBP17.92■□□□□ 0.46
PTCD2-208ENST00000510676 ERVK-7P63135 1459 aa17.92■□□□□ 0.46
PTCD2-208ENST00000510676 TXNDC2Q86VQ3 553 aa17.9■□□□□ 0.46
PTCD2-208ENST00000510676 CCNB3Q8WWL7 1395 aa17.9■□□□□ 0.46
PTCD2-208ENST00000510676 KCNA6P17658 529 aa17.89■□□□□ 0.45
PTCD2-208ENST00000510676 SLAIN2Q9P270 581 aa17.89■□□□□ 0.45
PTCD2-208ENST00000510676 PRDM15P57071 1507 aaPredicted RBP17.88■□□□□ 0.45
PTCD2-208ENST00000510676 UBTFP17480 764 aaKnown RBP17.88■□□□□ 0.45
PTCD2-208ENST00000510676 ZNF644Q9H582 1327 aaPredicted RBP17.88■□□□□ 0.45
PTCD2-208ENST00000510676 ABCC3O15438 1527 aa17.88■□□□□ 0.45
PTCD2-208ENST00000510676 FYCO1Q9BQS8 1478 aa17.87■□□□□ 0.45
PTCD2-208ENST00000510676 EP400Q96L91 3159 aa17.86■□□□□ 0.45
PTCD2-208ENST00000510676 MEX3CQ5U5Q3 659 aaKnown RBP17.86■□□□□ 0.45
PTCD2-208ENST00000510676 CAMSAP2Q08AD1 1489 aa17.86■□□□□ 0.45
PTCD2-208ENST00000510676 NKTRP30414 1462 aaKnown RBP17.85■□□□□ 0.45
PTCD2-208ENST00000510676 TIAM1Q13009 1591 aa17.85■□□□□ 0.45
PTCD2-208ENST00000510676 PROSER2Q86WR7 435 aaPredicted RBP17.84■□□□□ 0.45
PTCD2-208ENST00000510676 MSH6P52701 1360 aa17.83■□□□□ 0.45
PTCD2-208ENST00000510676 EID1Q9Y6B2 187 aa17.83■□□□□ 0.44
PTCD2-208ENST00000510676 SHPRHQ149N8 1683 aa17.83■□□□□ 0.44
PTCD2-208ENST00000510676 RGS12O14924 1447 aa17.82■□□□□ 0.44
PTCD2-208ENST00000510676 NWD1Q149M9 1564 aa17.82■□□□□ 0.44
PTCD2-208ENST00000510676 TMEM2Q9UHN6 1383 aa17.81■□□□□ 0.44
PTCD2-208ENST00000510676 CCDC141Q6ZP82 1450 aa17.81■□□□□ 0.44
PTCD2-208ENST00000510676 TET3O43151 1660 aa17.8■□□□□ 0.44
PTCD2-208ENST00000510676 RBM33Q96EV2 1170 aaKnown RBP17.8■□□□□ 0.44
PTCD2-208ENST00000510676 ZRANB1Q9UGI0 708 aa17.8■□□□□ 0.44
PTCD2-208ENST00000510676 AHDC1Q5TGY3 1603 aaPredicted RBP17.79■□□□□ 0.44
PTCD2-208ENST00000510676 SETBP1Q9Y6X0 1596 aa17.79■□□□□ 0.44
PTCD2-208ENST00000510676 RSPH4AQ5TD94 716 aa17.76■□□□□ 0.43
PTCD2-208ENST00000510676 AFF2P51816 1311 aa17.75■□□□□ 0.43
PTCD2-208ENST00000510676 ARHGAP31Q2M1Z3 1444 aa17.74■□□□□ 0.43
PTCD2-208ENST00000510676 MROH1Q8NDA8 1641 aa17.74■□□□□ 0.43
PTCD2-208ENST00000510676 RBM6P78332 1123 aaKnown RBP17.74■□□□□ 0.43
PTCD2-208ENST00000510676 DIP2AQ14689 1571 aa17.74■□□□□ 0.43
PTCD2-208ENST00000510676 KDM5AP29375 1690 aaKnown RBP17.74■□□□□ 0.43
PTCD2-208ENST00000510676 ATAD2Q6PL18 1390 aa17.73■□□□□ 0.43
PTCD2-208ENST00000510676 NCOA3Q9Y6Q9 1424 aa17.72■□□□□ 0.43
PTCD2-208ENST00000510676 SLC26A8Q96RN1 970 aa17.72■□□□□ 0.43
PTCD2-208ENST00000510676 MTUS2Q5JR59 1369 aa17.71■□□□□ 0.43
PTCD2-208ENST00000510676 EIF2AK4Q9P2K8 1649 aaKnown RBP17.7■□□□□ 0.42
PTCD2-208ENST00000510676 PIK3C2BO00750 1634 aa17.69■□□□□ 0.42
PTCD2-208ENST00000510676 NUTM2BA6NNL0 878 aaPredicted RBP17.69■□□□□ 0.42
PTCD2-208ENST00000510676 NUTM2EB1AL46 878 aaPredicted RBP17.69■□□□□ 0.42
Retrieved 100 of 20,778 RNA–protein pairs in 9 ms