RNA–Protein interactions for RNA: ENST00000510245.1

CAST-231, Transcript of calpastatin, humanhuman

TSL 4

Gene CAST, Length 561 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CAST-231ENST00000510245 PRG4Q92954 1404 aaPredicted RBP14.17□□□□□ -0.14
CAST-231ENST00000510245 SNPHO15079 494 aa14.14□□□□□ -0.15
CAST-231ENST00000510245 FAM163AQ96GL9 167 aaPredicted RBP14.13□□□□□ -0.15
CAST-231ENST00000510245 TOP2BQ02880 1626 aa14.12□□□□□ -0.15
CAST-231ENST00000510245 KIF3CO14782 793 aa14.12□□□□□ -0.15
CAST-231ENST00000510245 CADPS2Q86UW7 1296 aa14.12□□□□□ -0.15
CAST-231ENST00000510245 BCANQ96GW7 911 aa14.12□□□□□ -0.15
CAST-231ENST00000510245 PDE4AP27815 886 aa14.11□□□□□ -0.15
CAST-231ENST00000510245 GPHNQ9NQX3 736 aaPredicted RBP14.1□□□□□ -0.15
CAST-231ENST00000510245 ADCY10Q96PN6 1610 aa14.09□□□□□ -0.15
CAST-231ENST00000510245 NCKAP5LQ9HCH0 1330 aa14.08□□□□□ -0.16
CAST-231ENST00000510245 LARP6Q9BRS8 491 aaKnown RBP14.07□□□□□ -0.16
CAST-231ENST00000510245 CRISPLD2Q9H0B8 497 aa14.07□□□□□ -0.16
CAST-231ENST00000510245 SPATA31D1Q6ZQQ2 1576 aa14.07□□□□□ -0.16
CAST-231ENST00000510245 ABCA5Q8WWZ7 1642 aa14.07□□□□□ -0.16
CAST-231ENST00000510245 CUX1P39880 1505 aa14.06□□□□□ -0.16
CAST-231ENST00000510245 ADAMTS12P58397 1594 aa14.06□□□□□ -0.16
CAST-231ENST00000510245 DSG2Q14126 1118 aa14.05□□□□□ -0.16
CAST-231ENST00000510245 DOK7Q18PE1 504 aa14.05□□□□□ -0.16
CAST-231ENST00000510245 JPH4Q96JJ6 628 aa14.05□□□□□ -0.16
CAST-231ENST00000510245 FOXK1P85037 733 aa14.04□□□□□ -0.16
CAST-231ENST00000510245 PLPP6Q8IY26 295 aa14.03□□□□□ -0.16
CAST-231ENST00000510245 ZNF710Q8N1W2 664 aa14.03□□□□□ -0.16
CAST-231ENST00000510245 COL17A1Q9UMD9 1497 aaPredicted RBP14.03□□□□□ -0.16
CAST-231ENST00000510245 ABCA10Q8WWZ4 1543 aa14.02□□□□□ -0.16
CAST-231ENST00000510245 HOXB3P14651 431 aaPredicted RBP14.02□□□□□ -0.17
CAST-231ENST00000510245 FHAD1B1AJZ9 1412 aa14.01□□□□□ -0.17
CAST-231ENST00000510245 CERKQ8TCT0 537 aa14.01□□□□□ -0.17
CAST-231ENST00000510245 DDX27Q96GQ7 796 aaKnown RBP14.01□□□□□ -0.17
CAST-231ENST00000510245 PPP1R15BQ5SWA1 713 aa14□□□□□ -0.17
CAST-231ENST00000510245 PPRC1Q5VV67 1664 aaKnown RBP13.99□□□□□ -0.17
CAST-231ENST00000510245 RIMBP2O15034 1052 aa13.99□□□□□ -0.17
CAST-231ENST00000510245 ST18O60284 1047 aa13.99□□□□□ -0.17
CAST-231ENST00000510245 TEX14Q8IWB6 1497 aa13.95□□□□□ -0.18
CAST-231ENST00000510245 GLI2P10070 1586 aa13.95□□□□□ -0.18
CAST-231ENST00000510245 MFSD10Q14728 455 aa13.94□□□□□ -0.18
CAST-231ENST00000510245 PLB1Q6P1J6 1458 aa13.93□□□□□ -0.18
CAST-231ENST00000510245 ASXL2Q76L83 1435 aa13.93□□□□□ -0.18
CAST-231ENST00000510245 LCE2DQ5TA82 110 aaPredicted RBP13.93□□□□□ -0.18
CAST-231ENST00000510245 WDR70Q9NW82 654 aa13.93□□□□□ -0.18
CAST-231ENST00000510245 PCF11O94913 1555 aaKnown RBP13.92□□□□□ -0.18
CAST-231ENST00000510245 PRKCSHP14314 528 aaPredicted RBP13.92□□□□□ -0.18
CAST-231ENST00000510245 ZSWIM6Q9HCJ5 1215 aa13.9□□□□□ -0.18
CAST-231ENST00000510245 PTPRMP28827 1452 aa13.9□□□□□ -0.18
CAST-231ENST00000510245 SLC34A2O95436 690 aa13.89□□□□□ -0.19
CAST-231ENST00000510245 ARSIQ5FYB1 569 aa13.89□□□□□ -0.19
CAST-231ENST00000510245 RUSC2Q8N2Y8 1516 aa13.89□□□□□ -0.19
CAST-231ENST00000510245 UPF1Q92900 1129 aaKnown RBP eCLIP13.88□□□□□ -0.19
CAST-231ENST00000510245 MARVELD3Q96A59 401 aa13.88□□□□□ -0.19
CAST-231ENST00000510245 ABCC2Q92887 1545 aa13.87□□□□□ -0.19
CAST-231ENST00000510245 HOXB1P14653 301 aaPredicted RBP13.87□□□□□ -0.19
CAST-231ENST00000510245 PCDHGA4Q9Y5G9 962 aa13.87□□□□□ -0.19
CAST-231ENST00000510245 GPR153Q6NV75 609 aa13.86□□□□□ -0.19
CAST-231ENST00000510245 KHSRPQ92945 711 aaKnown RBP eCLIP13.86□□□□□ -0.19
CAST-231ENST00000510245 TTBK1Q5TCY1 1321 aaPredicted RBP13.85□□□□□ -0.19
CAST-231ENST00000510245 TBC1D12O60347 775 aa13.84□□□□□ -0.19
CAST-231ENST00000510245 EMP3P54852 163 aa13.84□□□□□ -0.19
CAST-231ENST00000510245 PTCD2Q8WV60 388 aaKnown RBP13.84□□□□□ -0.19
CAST-231ENST00000510245 KIF21BO75037 1637 aa13.83□□□□□ -0.2
CAST-231ENST00000510245 MAP3K4Q9Y6R4 1608 aa13.83□□□□□ -0.2
CAST-231ENST00000510245 ERICH3Q5RHP9 1530 aa13.83□□□□□ -0.2
CAST-231ENST00000510245 PTPRGP23470 1445 aa13.82□□□□□ -0.2
CAST-231ENST00000510245 EPRSP07814 1512 aaKnown RBP13.82□□□□□ -0.2
CAST-231ENST00000510245 POTEMA6NI47 508 aa13.82□□□□□ -0.2
CAST-231ENST00000510245 WRNQ14191 1432 aaPredicted RBP eCLIP13.81□□□□□ -0.2
CAST-231ENST00000510245 NUDT7P0C024 238 aa13.81□□□□□ -0.2
CAST-231ENST00000510245 HSPA2P54652 639 aa13.81□□□□□ -0.2
CAST-231ENST00000510245 POTEGQ6S5H5 508 aa13.81□□□□□ -0.2
CAST-231ENST00000510245 NBR1Q14596 966 aa13.8□□□□□ -0.2
CAST-231ENST00000510245 MAP3K9P80192 1104 aa13.79□□□□□ -0.2
CAST-231ENST00000510245 OXER1Q8TDS5 423 aa13.79□□□□□ -0.2
CAST-231ENST00000510245 EMILIN3Q9NT22 766 aa13.79□□□□□ -0.2
CAST-231ENST00000510245 KIAA0586Q9BVV6 1533 aa13.79□□□□□ -0.2
CAST-231ENST00000510245 E2F4Q16254 413 aa13.78□□□□□ -0.2
CAST-231ENST00000510245 FAM205CA6NFA0 338 aa13.77□□□□□ -0.21
CAST-231ENST00000510245 TPRNQ4KMQ1 711 aa13.77□□□□□ -0.21
CAST-231ENST00000510245 ERBB3P21860 1342 aa13.76□□□□□ -0.21
CAST-231ENST00000510245 CAMK2BQ13554 666 aa13.76□□□□□ -0.21
CAST-231ENST00000510245 ADAMTSL3P82987 1691 aa13.75□□□□□ -0.21
CAST-231ENST00000510245 CUL7Q14999 1698 aa13.73□□□□□ -0.21
CAST-231ENST00000510245 DPYSL4O14531 572 aa13.71□□□□□ -0.21
CAST-231ENST00000510245 TNIKQ9UKE5 1360 aa13.71□□□□□ -0.22
CAST-231ENST00000510245 UHRF1BP1LA0JNW5 1464 aa13.7□□□□□ -0.22
CAST-231ENST00000510245 ZNF316A6NFI3 1004 aaPredicted RBP13.7□□□□□ -0.22
CAST-231ENST00000510245 HS3ST6Q96QI5 342 aa13.7□□□□□ -0.22
CAST-231ENST00000510245 LHX6Q9UPM6 363 aa13.7□□□□□ -0.22
CAST-231ENST00000510245 EVI5O60447 810 aa13.69□□□□□ -0.22
CAST-231ENST00000510245 VARS2Q5ST30 1063 aaKnown RBP13.69□□□□□ -0.22
CAST-231ENST00000510245 ARID4BQ4LE39 1312 aaPredicted RBP13.68□□□□□ -0.22
CAST-231ENST00000510245 KCNV2Q8TDN2 545 aa13.68□□□□□ -0.22
CAST-231ENST00000510245 MADDQ8WXG6 1647 aa13.68□□□□□ -0.22
CAST-231ENST00000510245 CARMIL2Q6F5E8 1435 aa13.67□□□□□ -0.22
CAST-231ENST00000510245 UACAQ9BZF9 1416 aa13.67□□□□□ -0.22
CAST-231ENST00000510245 CD109Q6YHK3 1445 aa13.66□□□□□ -0.22
CAST-231ENST00000510245 MAGI3Q5TCQ9 1506 aa13.66□□□□□ -0.22
CAST-231ENST00000510245 POTEB3A0JP26 581 aa13.65□□□□□ -0.22
CAST-231ENST00000510245 POTEBQ6S5H4 581 aa13.65□□□□□ -0.22
CAST-231ENST00000510245 KDM5BQ9UGL1 1544 aa13.64□□□□□ -0.23
CAST-231ENST00000510245 WDR7Q9Y4E6 1490 aa13.63□□□□□ -0.23
CAST-231ENST00000510245 BCORL1Q5H9F3 1711 aa13.62□□□□□ -0.23
Retrieved 100 of 20,778 RNA–protein pairs in 29.7 ms