RNA–Protein interactions for RNA: ENST00000510129.5

UBE2D3-229, Transcript of ubiquitin conjugating enzyme E2 D3, humanhuman

TSL 3

Gene UBE2D3, Length 582 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Nucleus .

RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
UBE2D3-229ENST00000510129 KDM5DQ9BY66 1539 aa32.87■■■□□ 2.85
UBE2D3-229ENST00000510129 ANKRD30AQ9BXX3 1397 aa32.85■■■□□ 2.85
UBE2D3-229ENST00000510129 KIF15Q9NS87 1388 aa32.85■■■□□ 2.85
UBE2D3-229ENST00000510129 RNF17Q9BXT8 1623 aaKnown RBP32.85■■■□□ 2.85
UBE2D3-229ENST00000510129 FAM50AQ14320 339 aaKnown RBP32.84■■■□□ 2.85
UBE2D3-229ENST00000510129 WASHC2CQ9Y4E1 1318 aa32.83■■■□□ 2.85
UBE2D3-229ENST00000510129 ERBINQ96RT1 1412 aa32.83■■■□□ 2.85
UBE2D3-229ENST00000510129 HSPA2P54652 639 aa32.8■■■□□ 2.84
UBE2D3-229ENST00000510129 PTPRKQ15262 1439 aa32.79■■■□□ 2.84
UBE2D3-229ENST00000510129 ZC3H13Q5T200 1668 aaKnown RBP32.78■■■□□ 2.84
UBE2D3-229ENST00000510129 RRP7BPQ9NSQ0 103 aa32.78■■■□□ 2.84
UBE2D3-229ENST00000510129 ADGRL2O95490 1459 aa32.76■■■□□ 2.84
UBE2D3-229ENST00000510129 NCOA1Q15788 1441 aa32.75■■■□□ 2.83
UBE2D3-229ENST00000510129 PZPP20742 1482 aa32.74■■■□□ 2.83
UBE2D3-229ENST00000510129 DROSHAQ9NRR4 1374 aaKnown RBP eCLIP32.72■■■□□ 2.831e-10■■■□□ 14.9
UBE2D3-229ENST00000510129 CHIC2Q9UKJ5 165 aa32.72■■■□□ 2.83
UBE2D3-229ENST00000510129 ABCC3O15438 1527 aa32.68■■■□□ 2.82
UBE2D3-229ENST00000510129 DMRT2Q9Y5R5 561 aa32.68■■■□□ 2.82
UBE2D3-229ENST00000510129 MYO3AQ8NEV4 1616 aa32.68■■■□□ 2.82
UBE2D3-229ENST00000510129 PRDM15P57071 1507 aaPredicted RBP32.67■■■□□ 2.82
UBE2D3-229ENST00000510129 MROH1Q8NDA8 1641 aa32.67■■■□□ 2.82
UBE2D3-229ENST00000510129 ZNF142P52746 1687 aaPredicted RBP32.66■■■□□ 2.82
UBE2D3-229ENST00000510129 KANK1Q14678 1352 aa32.65■■■□□ 2.82
UBE2D3-229ENST00000510129 DEPDC5O75140 1603 aa32.64■■■□□ 2.82
UBE2D3-229ENST00000510129 PPARGC1BQ86YN6 1023 aaKnown RBP32.63■■■□□ 2.81
UBE2D3-229ENST00000510129 TNRQ92752 1358 aa32.62■■■□□ 2.81
UBE2D3-229ENST00000510129 CEP170BQ9Y4F5 1589 aaPredicted RBP32.62■■■□□ 2.81
UBE2D3-229ENST00000510129 ROCK1Q13464 1354 aa32.61■■■□□ 2.81
UBE2D3-229ENST00000510129 A2ML1A8K2U0 1454 aa32.58■■■□□ 2.81
UBE2D3-229ENST00000510129 ANKRD50Q9ULJ7 1429 aa32.58■■■□□ 2.81
UBE2D3-229ENST00000510129 CAMSAP1Q5T5Y3 1602 aa32.58■■■□□ 2.81
UBE2D3-229ENST00000510129 CEP152O94986 1710 aa32.57■■■□□ 2.8
UBE2D3-229ENST00000510129 NLRP1Q9C000 1473 aa32.56■■■□□ 2.8
UBE2D3-229ENST00000510129 STRCQ7RTU9 1775 aa32.56■■■□□ 2.8
UBE2D3-229ENST00000510129 FBXO31Q5XUX0 539 aaPredicted RBP32.56■■■□□ 2.8
UBE2D3-229ENST00000510129 ARHGAP31Q2M1Z3 1444 aa32.55■■■□□ 2.8
UBE2D3-229ENST00000510129 PLA2R1Q13018 1463 aa32.54■■■□□ 2.8
UBE2D3-229ENST00000510129 RRBP1Q9P2E9 1410 aaKnown RBP32.54■■■□□ 2.8
UBE2D3-229ENST00000510129 GRWD1Q9BQ67 446 aaKnown RBP eCLIP32.53■■■□□ 2.8
UBE2D3-229ENST00000510129 SPATA31D1Q6ZQQ2 1576 aa32.53■■■□□ 2.8
UBE2D3-229ENST00000510129 PTPRTO14522 1441 aa32.51■■■□□ 2.8
UBE2D3-229ENST00000510129 LMTK2Q8IWU2 1503 aa32.51■■■□□ 2.79
UBE2D3-229ENST00000510129 VWDEQ8N2E2 1590 aa32.49■■■□□ 2.79
UBE2D3-229ENST00000510129 ERVK-7P63135 1459 aa32.48■■■□□ 2.79
UBE2D3-229ENST00000510129 PKD2Q13563 968 aa32.48■■■□□ 2.79
UBE2D3-229ENST00000510129 ITGAEP38570 1179 aa32.44■■■□□ 2.78
UBE2D3-229ENST00000510129 THEMISQ8N1K5 641 aaPredicted RBP32.43■■■□□ 2.78
UBE2D3-229ENST00000510129 UGGT1Q9NYU2 1555 aa32.41■■■□□ 2.78
UBE2D3-229ENST00000510129 UNC13BO14795 1591 aa32.38■■■□□ 2.77
UBE2D3-229ENST00000510129 EFCAB6Q5THR3 1501 aa32.37■■■□□ 2.77
UBE2D3-229ENST00000510129 RPRD2Q5VT52 1461 aaKnown RBP32.35■■■□□ 2.77
UBE2D3-229ENST00000510129 NCKAP5LQ9HCH0 1330 aa32.33■■■□□ 2.77
UBE2D3-229ENST00000510129 CFAP65Q6ZU64 1925 aaKnown RBP32.32■■■□□ 2.76
UBE2D3-229ENST00000510129 TET3O43151 1660 aa32.31■■■□□ 2.76
UBE2D3-229ENST00000510129 POLR1AO95602 1720 aaPredicted RBP32.3■■■□□ 2.76
UBE2D3-229ENST00000510129 ANKLE2Q86XL3 938 aa32.3■■■□□ 2.76
UBE2D3-229ENST00000510129 GCC2Q8IWJ2 1684 aa32.27■■■□□ 2.76
UBE2D3-229ENST00000510129 IQGAP3Q86VI3 1631 aa32.26■■■□□ 2.75
UBE2D3-229ENST00000510129 CERKQ8TCT0 537 aa32.25■■■□□ 2.75
UBE2D3-229ENST00000510129 NOS1P29475 1434 aa32.25■■■□□ 2.75
UBE2D3-229ENST00000510129 KDM5AP29375 1690 aaKnown RBP32.24■■■□□ 2.75
UBE2D3-229ENST00000510129 UBR1Q8IWV7 1749 aa32.24■■■□□ 2.75
UBE2D3-229ENST00000510129 FBXO41Q8TF61 875 aa32.23■■■□□ 2.75
UBE2D3-229ENST00000510129 SLC52A1Q9NWF4 448 aa32.23■■■□□ 2.75
UBE2D3-229ENST00000510129 NUP155O75694 1391 aa32.22■■■□□ 2.75
UBE2D3-229ENST00000510129 ILDR1Q86SU0 546 aaPredicted RBP32.22■■■□□ 2.75
UBE2D3-229ENST00000510129 STAG3Q9UJ98 1225 aa32.2■■■□□ 2.75
UBE2D3-229ENST00000510129 MED14O60244 1454 aa32.19■■■□□ 2.74
UBE2D3-229ENST00000510129 NEURL4Q96JN8 1562 aa32.19■■■□□ 2.74
UBE2D3-229ENST00000510129 SYNMO15061 1565 aa32.18■■■□□ 2.74
UBE2D3-229ENST00000510129 PIK3C2BO00750 1634 aa32.18■■■□□ 2.74
UBE2D3-229ENST00000510129 HFM1A2PYH4 1435 aa32.17■■■□□ 2.74
UBE2D3-229ENST00000510129 NAIPQ13075 1403 aa32.17■■■□□ 2.74
UBE2D3-229ENST00000510129 SLIT1O75093 1534 aa32.16■■■□□ 2.74
UBE2D3-229ENST00000510129 IDI1Q13907 227 aa32.15■■■□□ 2.74
UBE2D3-229ENST00000510129 NPHP4O75161 1426 aaPredicted RBP32.14■■■□□ 2.74
UBE2D3-229ENST00000510129 LTBP4Q8N2S1 1624 aa32.13■■■□□ 2.73
UBE2D3-229ENST00000510129 ARHGAP23Q9P227 1491 aa32.13■■■□□ 2.73
UBE2D3-229ENST00000510129 EID1Q9Y6B2 187 aa32.13■■■□□ 2.73
UBE2D3-229ENST00000510129 E9PCH4 1651 aa32.12■■■□□ 2.73
UBE2D3-229ENST00000510129 IQSEC2Q5JU85 1478 aa32.11■■■□□ 2.73
UBE2D3-229ENST00000510129 SCAF11Q99590 1463 aaKnown RBP32.1■■■□□ 2.73
UBE2D3-229ENST00000510129 IQGAP1P46940 1657 aa32.1■■■□□ 2.73
UBE2D3-229ENST00000510129 TMEM2Q9UHN6 1383 aa32.09■■■□□ 2.73
UBE2D3-229ENST00000510129 ADGRB3O60242 1522 aa32.09■■■□□ 2.73
UBE2D3-229ENST00000510129 ZNF335Q9H4Z2 1342 aaPredicted RBP32.06■■■□□ 2.72
UBE2D3-229ENST00000510129 TXNDC2Q86VQ3 553 aa32.06■■■□□ 2.72
UBE2D3-229ENST00000510129 ACIN1Q9UKV3 1341 aaKnown RBP32.02■■■□□ 2.72
UBE2D3-229ENST00000510129 HDGFP51858 240 aaKnown RBP32.01■■■□□ 2.71
UBE2D3-229ENST00000510129 CPS1P31327 1500 aa32■■■□□ 2.71
UBE2D3-229ENST00000510129 LTKP29376 864 aa31.98■■■□□ 2.71
UBE2D3-229ENST00000510129 TRIM52Q96A61 297 aa31.96■■■□□ 2.71
UBE2D3-229ENST00000510129 TMEM131LA2VDJ0 1609 aa31.95■■■□□ 2.71
UBE2D3-229ENST00000510129 SPHKAPQ2M3C7 1700 aa31.94■■■□□ 2.7
UBE2D3-229ENST00000510129 ABCF1Q8NE71 845 aaKnown RBP eCLIP31.89■■■□□ 2.7
UBE2D3-229ENST00000510129 CHGAP10645 457 aaKnown RBP31.88■■■□□ 2.69
UBE2D3-229ENST00000510129 ZFYVE9O95405 1425 aa31.87■■■□□ 2.69
UBE2D3-229ENST00000510129 SLC4A1APQ9BWU0 796 aaKnown RBP31.86■■■□□ 2.69
UBE2D3-229ENST00000510129 MYO5BQ9ULV0 1848 aa31.86■■■□□ 2.69
UBE2D3-229ENST00000510129 RIMS2Q9UQ26 1411 aa31.85■■■□□ 2.69
Retrieved 100 of 20,778 RNA–protein pairs in 10.6 ms