RNA–Protein interactions for RNA: ENST00000509989.5

SNF8-206, Transcript of SNF8, ESCRT-II complex subunit, humanhuman

TSL 3

Gene SNF8, Length 677 nt, Biotype nonsense mediated decay, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SNF8-206ENST00000509989 EIF2AK4Q9P2K8 1649 aaKnown RBP20.96■□□□□ 0.95
SNF8-206ENST00000509989 ZMYM3Q14202 1370 aa20.96■□□□□ 0.95
SNF8-206ENST00000509989 CEP152O94986 1710 aa20.95■□□□□ 0.94
SNF8-206ENST00000509989 SETD1BQ9UPS6 1966 aaKnown RBP20.94■□□□□ 0.94
SNF8-206ENST00000509989 ESF1Q9H501 851 aaKnown RBP20.94■□□□□ 0.94
SNF8-206ENST00000509989 CNTLNQ9NXG0 1405 aa20.94■□□□□ 0.94
SNF8-206ENST00000509989 NCOA1Q15788 1441 aa20.93■□□□□ 0.94
SNF8-206ENST00000509989 CFAP65Q6ZU64 1925 aaKnown RBP20.92■□□□□ 0.94
SNF8-206ENST00000509989 ADGRL2O95490 1459 aa20.92■□□□□ 0.94
SNF8-206ENST00000509989 ITGAEP38570 1179 aa20.91■□□□□ 0.94
SNF8-206ENST00000509989 KDM5DQ9BY66 1539 aa20.9■□□□□ 0.94
SNF8-206ENST00000509989 ANKRD30AQ9BXX3 1397 aa20.88■□□□□ 0.93
SNF8-206ENST00000509989 FBXO31Q5XUX0 539 aaPredicted RBP20.88■□□□□ 0.93
SNF8-206ENST00000509989 ABCC3O15438 1527 aa20.88■□□□□ 0.93
SNF8-206ENST00000509989 DEPDC5O75140 1603 aa20.87■□□□□ 0.93
SNF8-206ENST00000509989 ERBINQ96RT1 1412 aa20.87■□□□□ 0.93
SNF8-206ENST00000509989 RRBP1Q9P2E9 1410 aaKnown RBP20.87■□□□□ 0.93
SNF8-206ENST00000509989 WASHC2CQ9Y4E1 1318 aa20.85■□□□□ 0.93
SNF8-206ENST00000509989 MYO3AQ8NEV4 1616 aa20.85■□□□□ 0.93
SNF8-206ENST00000509989 PRDM15P57071 1507 aaPredicted RBP20.84■□□□□ 0.93
SNF8-206ENST00000509989 PPP6R1Q9UPN7 881 aa20.84■□□□□ 0.93
SNF8-206ENST00000509989 CAMSAP1Q5T5Y3 1602 aa20.84■□□□□ 0.93
SNF8-206ENST00000509989 STRCQ7RTU9 1775 aa20.84■□□□□ 0.93
SNF8-206ENST00000509989 ZC3H13Q5T200 1668 aaKnown RBP20.83■□□□□ 0.93
SNF8-206ENST00000509989 GRWD1Q9BQ67 446 aaKnown RBP eCLIP20.83■□□□□ 0.935e-7■■■□□ 16.4
SNF8-206ENST00000509989 NPATQ14207 1427 aa20.82■□□□□ 0.92
SNF8-206ENST00000509989 UHRF1BP1Q6BDS2 1440 aa20.82■□□□□ 0.92
SNF8-206ENST00000509989 DROSHAQ9NRR4 1374 aaKnown RBP eCLIP20.81■□□□□ 0.92
SNF8-206ENST00000509989 PZPP20742 1482 aa20.81■□□□□ 0.92
SNF8-206ENST00000509989 FAM135AQ9P2D6 1515 aa20.8■□□□□ 0.92
SNF8-206ENST00000509989 VWDEQ8N2E2 1590 aa20.79■□□□□ 0.92
SNF8-206ENST00000509989 ANKRD50Q9ULJ7 1429 aa20.78■□□□□ 0.92
SNF8-206ENST00000509989 ZNF142P52746 1687 aaPredicted RBP20.78■□□□□ 0.92
SNF8-206ENST00000509989 CEP170BQ9Y4F5 1589 aaPredicted RBP20.76■□□□□ 0.91
SNF8-206ENST00000509989 ROCK1Q13464 1354 aa20.75■□□□□ 0.91
SNF8-206ENST00000509989 TNRQ92752 1358 aa20.73■□□□□ 0.91
SNF8-206ENST00000509989 UNC13BO14795 1591 aa20.73■□□□□ 0.91
SNF8-206ENST00000509989 SPATA31D1Q6ZQQ2 1576 aa20.72■□□□□ 0.91
SNF8-206ENST00000509989 ERVK-7P63135 1459 aa20.72■□□□□ 0.91
SNF8-206ENST00000509989 LMTK2Q8IWU2 1503 aa20.7■□□□□ 0.9
SNF8-206ENST00000509989 A2ML1A8K2U0 1454 aa20.69■□□□□ 0.9
SNF8-206ENST00000509989 GCC2Q8IWJ2 1684 aa20.68■□□□□ 0.9
SNF8-206ENST00000509989 EFCAB6Q5THR3 1501 aa20.67■□□□□ 0.9
SNF8-206ENST00000509989 KANK1Q14678 1352 aa20.66■□□□□ 0.9
SNF8-206ENST00000509989 NAIPQ13075 1403 aa20.66■□□□□ 0.9
SNF8-206ENST00000509989 ARHGAP31Q2M1Z3 1444 aa20.66■□□□□ 0.9
SNF8-206ENST00000509989 E9PCH4 1651 aa20.65■□□□□ 0.9
SNF8-206ENST00000509989 TET3O43151 1660 aa20.65■□□□□ 0.9
SNF8-206ENST00000509989 SYNMO15061 1565 aa20.65■□□□□ 0.9
SNF8-206ENST00000509989 NCKAP5LQ9HCH0 1330 aa20.65■□□□□ 0.9
SNF8-206ENST00000509989 IQGAP3Q86VI3 1631 aa20.64■□□□□ 0.9
SNF8-206ENST00000509989 UBR1Q8IWV7 1749 aa20.63■□□□□ 0.89
SNF8-206ENST00000509989 PIK3C2BO00750 1634 aa20.62■□□□□ 0.89
SNF8-206ENST00000509989 UGGT1Q9NYU2 1555 aa20.6■□□□□ 0.89
SNF8-206ENST00000509989 NLRP1Q9C000 1473 aa20.6■□□□□ 0.89
SNF8-206ENST00000509989 POLR1AO95602 1720 aaPredicted RBP20.59■□□□□ 0.89
SNF8-206ENST00000509989 MYO5BQ9ULV0 1848 aa20.59■□□□□ 0.89
SNF8-206ENST00000509989 NEURL4Q96JN8 1562 aa20.59■□□□□ 0.89
SNF8-206ENST00000509989 NOS1P29475 1434 aa20.58■□□□□ 0.88
SNF8-206ENST00000509989 NUP155O75694 1391 aa20.58■□□□□ 0.88
SNF8-206ENST00000509989 PLA2R1Q13018 1463 aa20.57■□□□□ 0.88
SNF8-206ENST00000509989 HFM1A2PYH4 1435 aa20.56■□□□□ 0.88
SNF8-206ENST00000509989 PTPRTO14522 1441 aa20.53■□□□□ 0.88
SNF8-206ENST00000509989 IDI1Q13907 227 aa20.53■□□□□ 0.88
SNF8-206ENST00000509989 RPRD2Q5VT52 1461 aaKnown RBP20.5■□□□□ 0.87
SNF8-206ENST00000509989 THEMISQ8N1K5 641 aaPredicted RBP20.49■□□□□ 0.87
SNF8-206ENST00000509989 SPHKAPQ2M3C7 1700 aa20.47■□□□□ 0.87
SNF8-206ENST00000509989 LTBP4Q8N2S1 1624 aa20.47■□□□□ 0.87
SNF8-206ENST00000509989 PKD2Q13563 968 aa20.47■□□□□ 0.87
SNF8-206ENST00000509989 ARHGAP23Q9P227 1491 aa20.46■□□□□ 0.87
SNF8-206ENST00000509989 LTKP29376 864 aa20.46■□□□□ 0.87
SNF8-206ENST00000509989 DMRT2Q9Y5R5 561 aa20.46■□□□□ 0.87
SNF8-206ENST00000509989 ADGRB3O60242 1522 aa20.46■□□□□ 0.87
SNF8-206ENST00000509989 TMEM131LA2VDJ0 1609 aa20.45■□□□□ 0.87
SNF8-206ENST00000509989 TRIM52Q96A61 297 aa20.45■□□□□ 0.86
SNF8-206ENST00000509989 ZNF335Q9H4Z2 1342 aaPredicted RBP20.45■□□□□ 0.86
SNF8-206ENST00000509989 KDM5AP29375 1690 aaKnown RBP20.45■□□□□ 0.86
SNF8-206ENST00000509989 IQGAP1P46940 1657 aa20.45■□□□□ 0.86
SNF8-206ENST00000509989 SLIT1O75093 1534 aa20.44■□□□□ 0.86
SNF8-206ENST00000509989 ANKLE2Q86XL3 938 aa20.43■□□□□ 0.86
SNF8-206ENST00000509989 STRCP1A6NGW2 1772 aa20.43■□□□□ 0.86
SNF8-206ENST00000509989 NPHP4O75161 1426 aaPredicted RBP20.42■□□□□ 0.86
SNF8-206ENST00000509989 MED14O60244 1454 aa20.42■□□□□ 0.86
SNF8-206ENST00000509989 ILDR1Q86SU0 546 aaPredicted RBP20.41■□□□□ 0.86
SNF8-206ENST00000509989 SENP3Q9H4L4 574 aaPredicted RBP20.41■□□□□ 0.86
SNF8-206ENST00000509989 CLTCL1P53675 1640 aa20.4■□□□□ 0.86
SNF8-206ENST00000509989 FOXD1Q16676 465 aa20.4■□□□□ 0.86
SNF8-206ENST00000509989 CERKQ8TCT0 537 aa20.4■□□□□ 0.86
SNF8-206ENST00000509989 TMEM2Q9UHN6 1383 aa20.4■□□□□ 0.86
SNF8-206ENST00000509989 SCAF11Q99590 1463 aaKnown RBP20.39■□□□□ 0.85
SNF8-206ENST00000509989 SLC52A1Q9NWF4 448 aa20.39■□□□□ 0.85
SNF8-206ENST00000509989 STAG3Q9UJ98 1225 aa20.39■□□□□ 0.85
SNF8-206ENST00000509989 TXNDC2Q86VQ3 553 aa20.38■□□□□ 0.85
SNF8-206ENST00000509989 SETD5Q9C0A6 1442 aa20.37■□□□□ 0.85
SNF8-206ENST00000509989 CHGAP10645 457 aaKnown RBP20.37■□□□□ 0.85
SNF8-206ENST00000509989 RAB3GAP2Q9H2M9 1393 aa20.35■□□□□ 0.85
SNF8-206ENST00000509989 NUTM2DQ5VT03 806 aaPredicted RBP20.35■□□□□ 0.85
SNF8-206ENST00000509989 SLC4A1APQ9BWU0 796 aaKnown RBP20.35■□□□□ 0.85
SNF8-206ENST00000509989 ZFYVE9O95405 1425 aa20.35■□□□□ 0.85
SNF8-206ENST00000509989 TRPM2O94759 1503 aa20.33■□□□□ 0.85
Retrieved 100 of 20,778 RNA–protein pairs in 46.5 ms