RNA–Protein interactions for RNA: ENST00000509848.5

ARHGEF28-208, Transcript of Rho guanine nucleotide exchange factor 28, humanhuman

TSL 4

Gene ARHGEF28, Length 560 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ARHGEF28-208ENST00000509848 WASHC2CQ9Y4E1 1318 aa31.16■■■□□ 2.58
ARHGEF28-208ENST00000509848 MYO3AQ8NEV4 1616 aa31.13■■■□□ 2.57
ARHGEF28-208ENST00000509848 MAST1Q9Y2H9 1570 aa31.09■■■□□ 2.57
ARHGEF28-208ENST00000509848 KDM5DQ9BY66 1539 aa31.09■■■□□ 2.57
ARHGEF28-208ENST00000509848 CEP170BQ9Y4F5 1589 aaPredicted RBP31.09■■■□□ 2.57
ARHGEF28-208ENST00000509848 TNRQ92752 1358 aa31.05■■■□□ 2.56
ARHGEF28-208ENST00000509848 ZNF142P52746 1687 aaPredicted RBP31.04■■■□□ 2.56
ARHGEF28-208ENST00000509848 PZPP20742 1482 aa31.03■■■□□ 2.56
ARHGEF28-208ENST00000509848 ABCC5O15440 1437 aa31.02■■■□□ 2.56
ARHGEF28-208ENST00000509848 A2ML1A8K2U0 1454 aa31.01■■■□□ 2.56
ARHGEF28-208ENST00000509848 RRP7BPQ9NSQ0 103 aa31.01■■■□□ 2.55
ARHGEF28-208ENST00000509848 PTPN23Q9H3S7 1636 aa31.01■■■□□ 2.55
ARHGEF28-208ENST00000509848 PKD2Q13563 968 aa31■■■□□ 2.55
ARHGEF28-208ENST00000509848 FAM135AQ9P2D6 1515 aa30.99■■■□□ 2.55
ARHGEF28-208ENST00000509848 PLA2R1Q13018 1463 aa30.99■■■□□ 2.55
ARHGEF28-208ENST00000509848 FGD6Q6ZV73 1430 aa30.98■■■□□ 2.55
ARHGEF28-208ENST00000509848 TCOF1Q13428 1488 aaKnown RBP30.96■■■□□ 2.55
ARHGEF28-208ENST00000509848 DNMT1P26358 1616 aaKnown RBP30.96■■■□□ 2.55
ARHGEF28-208ENST00000509848 LTBP4Q8N2S1 1624 aa30.96■■■□□ 2.55
ARHGEF28-208ENST00000509848 RNF17Q9BXT8 1623 aaKnown RBP30.96■■■□□ 2.55
ARHGEF28-208ENST00000509848 KIF15Q9NS87 1388 aa30.95■■■□□ 2.55
ARHGEF28-208ENST00000509848 ABCC3O15438 1527 aa30.94■■■□□ 2.54
ARHGEF28-208ENST00000509848 DUOX2Q9NRD8 1548 aa30.94■■■□□ 2.54
ARHGEF28-208ENST00000509848 DAPK1P53355 1430 aa30.94■■■□□ 2.54
ARHGEF28-208ENST00000509848 CHIC2Q9UKJ5 165 aa30.94■■■□□ 2.54
ARHGEF28-208ENST00000509848 ZNF335Q9H4Z2 1342 aaPredicted RBP30.94■■■□□ 2.54
ARHGEF28-208ENST00000509848 EIF2AK4Q9P2K8 1649 aaKnown RBP30.91■■■□□ 2.54
ARHGEF28-208ENST00000509848 SHANK2Q9UPX8 1470 aa30.91■■■□□ 2.54
ARHGEF28-208ENST00000509848 MROH1Q8NDA8 1641 aa30.9■■■□□ 2.54
ARHGEF28-208ENST00000509848 CROCC2H7BZ55 1655 aa30.88■■■□□ 2.53
ARHGEF28-208ENST00000509848 GRWD1Q9BQ67 446 aaKnown RBP eCLIP30.88■■■□□ 2.53
ARHGEF28-208ENST00000509848 DROSHAQ9NRR4 1374 aaKnown RBP eCLIP30.87■■■□□ 2.53
ARHGEF28-208ENST00000509848 FAM50AQ14320 339 aaKnown RBP30.85■■■□□ 2.53
ARHGEF28-208ENST00000509848 THEMISQ8N1K5 641 aaPredicted RBP30.85■■■□□ 2.53
ARHGEF28-208ENST00000509848 NLRP1Q9C000 1473 aa30.84■■■□□ 2.53
ARHGEF28-208ENST00000509848 ERBINQ96RT1 1412 aa30.83■■■□□ 2.53
ARHGEF28-208ENST00000509848 ZC3H13Q5T200 1668 aaKnown RBP30.83■■■□□ 2.53
ARHGEF28-208ENST00000509848 ANKLE2Q86XL3 938 aa30.82■■■□□ 2.52
ARHGEF28-208ENST00000509848 ERVK-7P63135 1459 aa30.82■■■□□ 2.52
ARHGEF28-208ENST00000509848 CEP152O94986 1710 aa30.81■■■□□ 2.52
ARHGEF28-208ENST00000509848 UGGT1Q9NYU2 1555 aa30.81■■■□□ 2.52
ARHGEF28-208ENST00000509848 ANKRD30AQ9BXX3 1397 aa30.8■■■□□ 2.52
ARHGEF28-208ENST00000509848 SPATA31D1Q6ZQQ2 1576 aa30.79■■■□□ 2.52
ARHGEF28-208ENST00000509848 NEURL4Q96JN8 1562 aa30.77■■■□□ 2.52
ARHGEF28-208ENST00000509848 PRDM15P57071 1507 aaPredicted RBP30.75■■■□□ 2.51
ARHGEF28-208ENST00000509848 IQSEC2Q5JU85 1478 aa30.74■■■□□ 2.51
ARHGEF28-208ENST00000509848 POLR1AO95602 1720 aaPredicted RBP30.72■■■□□ 2.51
ARHGEF28-208ENST00000509848 KANK1Q14678 1352 aa30.71■■■□□ 2.51
ARHGEF28-208ENST00000509848 PPARGC1BQ86YN6 1023 aaKnown RBP30.71■■■□□ 2.51
ARHGEF28-208ENST00000509848 CFAP65Q6ZU64 1925 aaKnown RBP30.71■■■□□ 2.51
ARHGEF28-208ENST00000509848 ARHGAP31Q2M1Z3 1444 aa30.69■■■□□ 2.5
ARHGEF28-208ENST00000509848 NPHP4O75161 1426 aaPredicted RBP30.68■■■□□ 2.5
ARHGEF28-208ENST00000509848 UBAP1LF5GYI3 381 aa30.68■■■□□ 2.5
ARHGEF28-208ENST00000509848 DEPDC5O75140 1603 aa30.67■■■□□ 2.5
ARHGEF28-208ENST00000509848 ADGRL2O95490 1459 aa30.66■■■□□ 2.5
ARHGEF28-208ENST00000509848 MED14O60244 1454 aa30.63■■■□□ 2.49
ARHGEF28-208ENST00000509848 UBR1Q8IWV7 1749 aa30.59■■■□□ 2.49
ARHGEF28-208ENST00000509848 VWDEQ8N2E2 1590 aa30.59■■■□□ 2.49
ARHGEF28-208ENST00000509848 ANKRD50Q9ULJ7 1429 aa30.59■■■□□ 2.49
ARHGEF28-208ENST00000509848 LTKP29376 864 aa30.59■■■□□ 2.49
ARHGEF28-208ENST00000509848 LMTK2Q8IWU2 1503 aa30.57■■■□□ 2.49
ARHGEF28-208ENST00000509848 TXNDC2Q86VQ3 553 aa30.57■■■□□ 2.48
ARHGEF28-208ENST00000509848 IDI1Q13907 227 aa30.56■■■□□ 2.48
ARHGEF28-208ENST00000509848 STAG3Q9UJ98 1225 aa30.55■■■□□ 2.48
ARHGEF28-208ENST00000509848 CPS1P31327 1500 aa30.55■■■□□ 2.48
ARHGEF28-208ENST00000509848 IQGAP1P46940 1657 aa30.55■■■□□ 2.48
ARHGEF28-208ENST00000509848 ITGAEP38570 1179 aa30.54■■■□□ 2.48
ARHGEF28-208ENST00000509848 SCAF11Q99590 1463 aaKnown RBP30.52■■■□□ 2.48
ARHGEF28-208ENST00000509848 PIK3C2BO00750 1634 aa30.51■■■□□ 2.48
ARHGEF28-208ENST00000509848 ARHGAP23Q9P227 1491 aa30.5■■■□□ 2.47
ARHGEF28-208ENST00000509848 SCAF1Q9H7N4 1312 aaKnown RBP30.49■■■□□ 2.47
ARHGEF28-208ENST00000509848 EFCAB6Q5THR3 1501 aa30.49■■■□□ 2.47
ARHGEF28-208ENST00000509848 PIP4K2BP78356 416 aa30.49■■■□□ 2.47
ARHGEF28-208ENST00000509848 EID1Q9Y6B2 187 aa30.49■■■□□ 2.47
ARHGEF28-208ENST00000509848 SLIT1O75093 1534 aa30.48■■■□□ 2.47
ARHGEF28-208ENST00000509848 SYNMO15061 1565 aa30.47■■■□□ 2.47
ARHGEF28-208ENST00000509848 DISP3Q9P2K9 1392 aa30.47■■■□□ 2.47
ARHGEF28-208ENST00000509848 TMEM2Q9UHN6 1383 aa30.47■■■□□ 2.47
ARHGEF28-208ENST00000509848 NOS1P29475 1434 aa30.47■■■□□ 2.47
ARHGEF28-208ENST00000509848 TOM1O60784 492 aa30.44■■■□□ 2.46
ARHGEF28-208ENST00000509848 ROCK1Q13464 1354 aa30.42■■■□□ 2.46
ARHGEF28-208ENST00000509848 STRCP1A6NGW2 1772 aa30.41■■■□□ 2.46
ARHGEF28-208ENST00000509848 SLC52A1Q9NWF4 448 aa30.4■■■□□ 2.46
ARHGEF28-208ENST00000509848 LRRC7Q96NW7 1537 aa30.39■■■□□ 2.46
ARHGEF28-208ENST00000509848 HSPA1LP34931 641 aa30.36■■■□□ 2.45
ARHGEF28-208ENST00000509848 SENP3Q9H4L4 574 aaPredicted RBP30.36■■■□□ 2.45
ARHGEF28-208ENST00000509848 RPRD2Q5VT52 1461 aaKnown RBP30.36■■■□□ 2.45
ARHGEF28-208ENST00000509848 UNC13BO14795 1591 aa30.35■■■□□ 2.45
ARHGEF28-208ENST00000509848 TET3O43151 1660 aa30.34■■■□□ 2.45
ARHGEF28-208ENST00000509848 SLC26A8Q96RN1 970 aa30.34■■■□□ 2.45
ARHGEF28-208ENST00000509848 ADGRB3O60242 1522 aa30.33■■■□□ 2.45
ARHGEF28-208ENST00000509848 ILDR2Q71H61 639 aa30.32■■■□□ 2.44
ARHGEF28-208ENST00000509848 KDM5AP29375 1690 aaKnown RBP30.32■■■□□ 2.44
ARHGEF28-208ENST00000509848 NUP155O75694 1391 aa30.31■■■□□ 2.44
ARHGEF28-208ENST00000509848 ALKQ9UM73 1620 aa30.3■■■□□ 2.44
ARHGEF28-208ENST00000509848 BCANQ96GW7 911 aa30.3■■■□□ 2.44
ARHGEF28-208ENST00000509848 CHGAP10645 457 aaKnown RBP30.29■■■□□ 2.44
ARHGEF28-208ENST00000509848 GCC2Q8IWJ2 1684 aa30.26■■■□□ 2.43
ARHGEF28-208ENST00000509848 E9PCH4 1651 aa30.23■■■□□ 2.43
ARHGEF28-208ENST00000509848 IQGAP3Q86VI3 1631 aa30.23■■■□□ 2.43
Retrieved 100 of 20,778 RNA–protein pairs in 30.8 ms