RNA–Protein interactions for RNA: ENST00000509662.5

ATP2C1-217, Transcript of ATPase secretory pathway Ca2+ transporting 1, humanhuman

TSL 4

Gene ATP2C1, Length 559 nt, Biotype protein coding, Subcellular localisation Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ATP2C1-217ENST00000509662 DNMT1P26358 1616 aaKnown RBP36.58■■■■□ 3.45
ATP2C1-217ENST00000509662 DMRT2Q9Y5R5 561 aa36.57■■■■□ 3.44
ATP2C1-217ENST00000509662 DUOX2Q9NRD8 1548 aa36.57■■■■□ 3.44
ATP2C1-217ENST00000509662 KDM5DQ9BY66 1539 aa36.56■■■■□ 3.44
ATP2C1-217ENST00000509662 CROCC2H7BZ55 1655 aa36.56■■■■□ 3.44
ATP2C1-217ENST00000509662 FAM50AQ14320 339 aaKnown RBP36.56■■■■□ 3.44
ATP2C1-217ENST00000509662 RRP7BPQ9NSQ0 103 aa36.56■■■■□ 3.44
ATP2C1-217ENST00000509662 KIF15Q9NS87 1388 aa36.54■■■■□ 3.44
ATP2C1-217ENST00000509662 EIF2AK4Q9P2K8 1649 aaKnown RBP36.53■■■■□ 3.44
ATP2C1-217ENST00000509662 CHIC2Q9UKJ5 165 aa36.51■■■■□ 3.44
ATP2C1-217ENST00000509662 ANKRD30AQ9BXX3 1397 aa36.5■■■■□ 3.43
ATP2C1-217ENST00000509662 RNF17Q9BXT8 1623 aaKnown RBP36.49■■■■□ 3.43
ATP2C1-217ENST00000509662 ERBINQ96RT1 1412 aa36.45■■■■□ 3.43
ATP2C1-217ENST00000509662 PZPP20742 1482 aa36.44■■■■□ 3.42
ATP2C1-217ENST00000509662 FBXO31Q5XUX0 539 aaPredicted RBP36.44■■■■□ 3.42
ATP2C1-217ENST00000509662 STRCQ7RTU9 1775 aa36.43■■■■□ 3.42
ATP2C1-217ENST00000509662 MYO3AQ8NEV4 1616 aa36.41■■■■□ 3.42
ATP2C1-217ENST00000509662 TNRQ92752 1358 aa36.4■■■■□ 3.42
ATP2C1-217ENST00000509662 ILDR1Q86SU0 546 aaPredicted RBP36.4■■■■□ 3.42
ATP2C1-217ENST00000509662 NCOA1Q15788 1441 aa36.4■■■■□ 3.42
ATP2C1-217ENST00000509662 ZC3H13Q5T200 1668 aaKnown RBP36.39■■■■□ 3.42
ATP2C1-217ENST00000509662 ABCC3O15438 1527 aa36.38■■■■□ 3.41
ATP2C1-217ENST00000509662 CEP170BQ9Y4F5 1589 aaPredicted RBP36.36■■■■□ 3.41
ATP2C1-217ENST00000509662 ZNF142P52746 1687 aaPredicted RBP36.36■■■■□ 3.41
ATP2C1-217ENST00000509662 CAMSAP1Q5T5Y3 1602 aa36.36■■■■□ 3.41
ATP2C1-217ENST00000509662 GRWD1Q9BQ67 446 aaKnown RBP eCLIP36.34■■■■□ 3.41
ATP2C1-217ENST00000509662 MROH1Q8NDA8 1641 aa36.34■■■■□ 3.41
ATP2C1-217ENST00000509662 PTPRTO14522 1441 aa36.34■■■■□ 3.41
ATP2C1-217ENST00000509662 A2ML1A8K2U0 1454 aa36.33■■■■□ 3.41
ATP2C1-217ENST00000509662 ADGRL2O95490 1459 aa36.33■■■■□ 3.41
ATP2C1-217ENST00000509662 KANK1Q14678 1352 aa36.32■■■■□ 3.4
ATP2C1-217ENST00000509662 RRBP1Q9P2E9 1410 aaKnown RBP36.31■■■■□ 3.4
ATP2C1-217ENST00000509662 DROSHAQ9NRR4 1374 aaKnown RBP eCLIP36.3■■■■□ 3.4
ATP2C1-217ENST00000509662 PKD2Q13563 968 aa36.28■■■■□ 3.4
ATP2C1-217ENST00000509662 PRDM15P57071 1507 aaPredicted RBP36.28■■■■□ 3.4
ATP2C1-217ENST00000509662 PLA2R1Q13018 1463 aa36.27■■■■□ 3.4
ATP2C1-217ENST00000509662 NCKAP5LQ9HCH0 1330 aa36.26■■■■□ 3.39
ATP2C1-217ENST00000509662 CEP152O94986 1710 aa36.25■■■■□ 3.39
ATP2C1-217ENST00000509662 FBXO41Q8TF61 875 aa36.25■■■■□ 3.39
ATP2C1-217ENST00000509662 NLRP1Q9C000 1473 aa36.24■■■■□ 3.39
ATP2C1-217ENST00000509662 DEPDC5O75140 1603 aa36.23■■■■□ 3.39
ATP2C1-217ENST00000509662 THEMISQ8N1K5 641 aaPredicted RBP36.22■■■■□ 3.39
ATP2C1-217ENST00000509662 CERKQ8TCT0 537 aa36.22■■■■□ 3.39
ATP2C1-217ENST00000509662 ANKRD50Q9ULJ7 1429 aa36.2■■■■□ 3.39
ATP2C1-217ENST00000509662 ARHGAP31Q2M1Z3 1444 aa36.19■■■■□ 3.38
ATP2C1-217ENST00000509662 SPATA31D1Q6ZQQ2 1576 aa36.19■■■■□ 3.38
ATP2C1-217ENST00000509662 ERVK-7P63135 1459 aa36.18■■■■□ 3.38
ATP2C1-217ENST00000509662 ITGAEP38570 1179 aa36.16■■■■□ 3.38
ATP2C1-217ENST00000509662 ROCK1Q13464 1354 aa36.15■■■■□ 3.38
ATP2C1-217ENST00000509662 CFAP65Q6ZU64 1925 aaKnown RBP36.15■■■■□ 3.38
ATP2C1-217ENST00000509662 UGGT1Q9NYU2 1555 aa36.13■■■■□ 3.37
ATP2C1-217ENST00000509662 ANKLE2Q86XL3 938 aa36.11■■■■□ 3.37
ATP2C1-217ENST00000509662 LMTK2Q8IWU2 1503 aa36.1■■■■□ 3.37
ATP2C1-217ENST00000509662 VWDEQ8N2E2 1590 aa36.09■■■■□ 3.37
ATP2C1-217ENST00000509662 POLR1AO95602 1720 aaPredicted RBP35.99■■■■□ 3.35
ATP2C1-217ENST00000509662 EFCAB6Q5THR3 1501 aa35.96■■■■□ 3.35
ATP2C1-217ENST00000509662 LTBP4Q8N2S1 1624 aa35.95■■■■□ 3.35
ATP2C1-217ENST00000509662 STAG3Q9UJ98 1225 aa35.95■■■■□ 3.35
ATP2C1-217ENST00000509662 ZNF335Q9H4Z2 1342 aaPredicted RBP35.94■■■■□ 3.34
ATP2C1-217ENST00000509662 UBR1Q8IWV7 1749 aa35.91■■■■□ 3.34
ATP2C1-217ENST00000509662 UNC13BO14795 1591 aa35.91■■■■□ 3.34
ATP2C1-217ENST00000509662 NEURL4Q96JN8 1562 aa35.91■■■■□ 3.34
ATP2C1-217ENST00000509662 RPRD2Q5VT52 1461 aaKnown RBP35.91■■■■□ 3.34
ATP2C1-217ENST00000509662 IDI1Q13907 227 aa35.9■■■■□ 3.34
ATP2C1-217ENST00000509662 MED14O60244 1454 aa35.89■■■■□ 3.34
ATP2C1-217ENST00000509662 SLC52A1Q9NWF4 448 aa35.89■■■■□ 3.34
ATP2C1-217ENST00000509662 NPHP4O75161 1426 aaPredicted RBP35.89■■■■□ 3.34
ATP2C1-217ENST00000509662 NOS1P29475 1434 aa35.89■■■■□ 3.34
ATP2C1-217ENST00000509662 TET3O43151 1660 aa35.88■■■■□ 3.33
ATP2C1-217ENST00000509662 EID1Q9Y6B2 187 aa35.86■■■■□ 3.33
ATP2C1-217ENST00000509662 NUP155O75694 1391 aa35.86■■■■□ 3.33
ATP2C1-217ENST00000509662 PIK3C2BO00750 1634 aa35.84■■■■□ 3.33
ATP2C1-217ENST00000509662 TXNDC2Q86VQ3 553 aa35.84■■■■□ 3.33
ATP2C1-217ENST00000509662 IQSEC2Q5JU85 1478 aa35.84■■■■□ 3.33
ATP2C1-217ENST00000509662 GCC2Q8IWJ2 1684 aa35.81■■■■□ 3.32
ATP2C1-217ENST00000509662 SYNMO15061 1565 aa35.81■■■■□ 3.32
ATP2C1-217ENST00000509662 SLIT1O75093 1534 aa35.8■■■■□ 3.32
ATP2C1-217ENST00000509662 SCAF11Q99590 1463 aaKnown RBP35.8■■■■□ 3.32
ATP2C1-217ENST00000509662 ARHGAP23Q9P227 1491 aa35.8■■■■□ 3.32
ATP2C1-217ENST00000509662 IQGAP3Q86VI3 1631 aa35.79■■■■□ 3.32
ATP2C1-217ENST00000509662 KDM5AP29375 1690 aaKnown RBP35.78■■■■□ 3.32
ATP2C1-217ENST00000509662 IQGAP1P46940 1657 aa35.78■■■■□ 3.32
ATP2C1-217ENST00000509662 NAIPQ13075 1403 aa35.78■■■■□ 3.32
ATP2C1-217ENST00000509662 TMEM2Q9UHN6 1383 aa35.77■■■■□ 3.32
ATP2C1-217ENST00000509662 LTKP29376 864 aa35.77■■■■□ 3.32
ATP2C1-217ENST00000509662 HFM1A2PYH4 1435 aa35.76■■■■□ 3.32
ATP2C1-217ENST00000509662 E9PCH4 1651 aa35.7■■■■□ 3.31
ATP2C1-217ENST00000509662 CPS1P31327 1500 aa35.7■■■■□ 3.31
ATP2C1-217ENST00000509662 ADGRB3O60242 1522 aa35.69■■■■□ 3.3
ATP2C1-217ENST00000509662 HDGFP51858 240 aaKnown RBP35.66■■■■□ 3.3
ATP2C1-217ENST00000509662 UBAP1LF5GYI3 381 aa35.62■■■■□ 3.29
ATP2C1-217ENST00000509662 CHGAP10645 457 aaKnown RBP35.62■■■■□ 3.29
ATP2C1-217ENST00000509662 TRIM52Q96A61 297 aa35.59■■■■□ 3.29
ATP2C1-217ENST00000509662 BCANQ96GW7 911 aa35.56■■■■□ 3.28
ATP2C1-217ENST00000509662 TMEM131LA2VDJ0 1609 aa35.55■■■■□ 3.28
ATP2C1-217ENST00000509662 PPP1R15AO75807 674 aaPredicted RBP35.54■■■■□ 3.28
ATP2C1-217ENST00000509662 ABCF1Q8NE71 845 aaKnown RBP eCLIP35.54■■■■□ 3.28
ATP2C1-217ENST00000509662 RIMS2Q9UQ26 1411 aa35.51■■■■□ 3.28
ATP2C1-217ENST00000509662 TOM1O60784 492 aa35.51■■■■□ 3.28
ATP2C1-217ENST00000509662 MYO5BQ9ULV0 1848 aa35.5■■■■□ 3.27
Retrieved 100 of 20,778 RNA–protein pairs in 11.3 ms