RNA–Protein interactions for RNA: ENST00000509637.6

RAB40C-202, Transcript of RAB40C, member RAS oncogene family, humanhuman

TSL 3

Gene RAB40C, Length 565 nt, Biotype nonsense mediated decay, Subcellular localisation Endoplasmic reticulum, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RAB40C-202ENST00000509637 A2ML1A8K2U0 1454 aa25.52■■□□□ 1.68
RAB40C-202ENST00000509637 IQSEC2Q5JU85 1478 aa25.52■■□□□ 1.68
RAB40C-202ENST00000509637 DISP3Q9P2K9 1392 aa25.5■■□□□ 1.67
RAB40C-202ENST00000509637 LRRC9Q6ZRR7 1453 aa25.47■■□□□ 1.67
RAB40C-202ENST00000509637 TNRQ92752 1358 aa25.47■■□□□ 1.67
RAB40C-202ENST00000509637 ARHGEF5Q12774 1597 aa25.47■■□□□ 1.67
RAB40C-202ENST00000509637 PZPP20742 1482 aa25.47■■□□□ 1.67
RAB40C-202ENST00000509637 RSPH4AQ5TD94 716 aa25.46■■□□□ 1.67
RAB40C-202ENST00000509637 NEURL4Q96JN8 1562 aa25.45■■□□□ 1.66
RAB40C-202ENST00000509637 VPS8Q8N3P4 1428 aa25.45■■□□□ 1.66
RAB40C-202ENST00000509637 KDM5DQ9BY66 1539 aa25.44■■□□□ 1.66
RAB40C-202ENST00000509637 WASHC2CQ9Y4E1 1318 aa25.43■■□□□ 1.66
RAB40C-202ENST00000509637 MIA2Q96PC5 1412 aa25.4■■□□□ 1.66
RAB40C-202ENST00000509637 UBAP1LF5GYI3 381 aa25.4■■□□□ 1.66
RAB40C-202ENST00000509637 DROSHAQ9NRR4 1374 aaKnown RBP eCLIP25.39■■□□□ 1.651e-6■■■□□ 17.4
RAB40C-202ENST00000509637 TSPY4P0CV99 314 aa25.38■■□□□ 1.65
RAB40C-202ENST00000509637 TSPY10P0CW01 314 aa25.38■■□□□ 1.65
RAB40C-202ENST00000509637 FAM135AQ9P2D6 1515 aa25.36■■□□□ 1.65
RAB40C-202ENST00000509637 MAST1Q9Y2H9 1570 aa25.35■■□□□ 1.65
RAB40C-202ENST00000509637 MROH1Q8NDA8 1641 aa25.35■■□□□ 1.65
RAB40C-202ENST00000509637 SPATA31D1Q6ZQQ2 1576 aa25.34■■□□□ 1.65
RAB40C-202ENST00000509637 POLR1AO95602 1720 aaPredicted RBP25.34■■□□□ 1.65
RAB40C-202ENST00000509637 RNF17Q9BXT8 1623 aaKnown RBP25.34■■□□□ 1.65
RAB40C-202ENST00000509637 ABCC3O15438 1527 aa25.33■■□□□ 1.65
RAB40C-202ENST00000509637 MAP3K1Q13233 1512 aa25.31■■□□□ 1.64
RAB40C-202ENST00000509637 VWDEQ8N2E2 1590 aa25.31■■□□□ 1.64
RAB40C-202ENST00000509637 MYOM3Q5VTT5 1437 aa25.3■■□□□ 1.64
RAB40C-202ENST00000509637 SHANK2Q9UPX8 1470 aa25.3■■□□□ 1.64
RAB40C-202ENST00000509637 ANKLE2Q86XL3 938 aa25.3■■□□□ 1.64
RAB40C-202ENST00000509637 NLRP1Q9C000 1473 aa25.29■■□□□ 1.64
RAB40C-202ENST00000509637 SOCS7O14512 581 aa25.29■■□□□ 1.64
RAB40C-202ENST00000509637 UGGT1Q9NYU2 1555 aa25.29■■□□□ 1.64
RAB40C-202ENST00000509637 THEMISQ8N1K5 641 aaPredicted RBP25.28■■□□□ 1.64
RAB40C-202ENST00000509637 MED14O60244 1454 aa25.27■■□□□ 1.64
RAB40C-202ENST00000509637 ALKQ9UM73 1620 aa25.26■■□□□ 1.63
RAB40C-202ENST00000509637 CFAP65Q6ZU64 1925 aaKnown RBP25.26■■□□□ 1.63
RAB40C-202ENST00000509637 ERVK-7P63135 1459 aa25.26■■□□□ 1.63
RAB40C-202ENST00000509637 NPHP4O75161 1426 aaPredicted RBP25.25■■□□□ 1.63
RAB40C-202ENST00000509637 ABCC5O15440 1437 aa25.24■■□□□ 1.63
RAB40C-202ENST00000509637 STRCP1A6NGW2 1772 aa25.23■■□□□ 1.63
RAB40C-202ENST00000509637 CEP152O94986 1710 aa25.23■■□□□ 1.63
RAB40C-202ENST00000509637 HSPA1LP34931 641 aa25.23■■□□□ 1.63
RAB40C-202ENST00000509637 DEPDC5O75140 1603 aa25.23■■□□□ 1.63
RAB40C-202ENST00000509637 EIF2AK4Q9P2K8 1649 aaKnown RBP25.23■■□□□ 1.63
RAB40C-202ENST00000509637 CPS1P31327 1500 aa25.22■■□□□ 1.63
RAB40C-202ENST00000509637 PIP4K2BP78356 416 aa25.21■■□□□ 1.63
RAB40C-202ENST00000509637 RRP7BPQ9NSQ0 103 aa25.19■■□□□ 1.62
RAB40C-202ENST00000509637 ZC3H13Q5T200 1668 aaKnown RBP25.19■■□□□ 1.62
RAB40C-202ENST00000509637 DUOX2Q9NRD8 1548 aa25.18■■□□□ 1.62
RAB40C-202ENST00000509637 LTKP29376 864 aa25.17■■□□□ 1.62
RAB40C-202ENST00000509637 IQGAP1P46940 1657 aa25.16■■□□□ 1.62
RAB40C-202ENST00000509637 KIF15Q9NS87 1388 aa25.16■■□□□ 1.62
RAB40C-202ENST00000509637 UBR1Q8IWV7 1749 aa25.15■■□□□ 1.62
RAB40C-202ENST00000509637 SCAF1Q9H7N4 1312 aaKnown RBP25.14■■□□□ 1.62
RAB40C-202ENST00000509637 PTPN23Q9H3S7 1636 aa25.14■■□□□ 1.61
RAB40C-202ENST00000509637 TOM1O60784 492 aa25.13■■□□□ 1.61
RAB40C-202ENST00000509637 LRRC7Q96NW7 1537 aa25.12■■□□□ 1.61
RAB40C-202ENST00000509637 CROCC2H7BZ55 1655 aa25.12■■□□□ 1.61
RAB40C-202ENST00000509637 DAPK1P53355 1430 aa25.12■■□□□ 1.61
RAB40C-202ENST00000509637 PRDM15P57071 1507 aaPredicted RBP25.11■■□□□ 1.61
RAB40C-202ENST00000509637 ARHGAP31Q2M1Z3 1444 aa25.11■■□□□ 1.61
RAB40C-202ENST00000509637 ARHGAP23Q9P227 1491 aa25.1■■□□□ 1.61
RAB40C-202ENST00000509637 GRWD1Q9BQ67 446 aaKnown RBP eCLIP25.1■■□□□ 1.61
RAB40C-202ENST00000509637 CHIC2Q9UKJ5 165 aa25.09■■□□□ 1.61
RAB40C-202ENST00000509637 FGD6Q6ZV73 1430 aa25.08■■□□□ 1.61
RAB40C-202ENST00000509637 ERBINQ96RT1 1412 aa25.07■■□□□ 1.6
RAB40C-202ENST00000509637 SCAF11Q99590 1463 aaKnown RBP25.06■■□□□ 1.6
RAB40C-202ENST00000509637 SLIT1O75093 1534 aa25.06■■□□□ 1.6
RAB40C-202ENST00000509637 TXNDC2Q86VQ3 553 aa25.05■■□□□ 1.6
RAB40C-202ENST00000509637 MED1Q15648 1581 aaPredicted RBP25.05■■□□□ 1.6
RAB40C-202ENST00000509637 PIK3C2BO00750 1634 aa25.03■■□□□ 1.6
RAB40C-202ENST00000509637 IDI1Q13907 227 aa25.02■■□□□ 1.6
RAB40C-202ENST00000509637 SENP3Q9H4L4 574 aaPredicted RBP25.01■■□□□ 1.59
RAB40C-202ENST00000509637 XIRP1Q702N8 1843 aaKnown RBP25■■□□□ 1.59
RAB40C-202ENST00000509637 SYNMO15061 1565 aa24.97■■□□□ 1.59
RAB40C-202ENST00000509637 LMTK2Q8IWU2 1503 aa24.97■■□□□ 1.59
RAB40C-202ENST00000509637 TMEM2Q9UHN6 1383 aa24.97■■□□□ 1.59
RAB40C-202ENST00000509637 APLP2Q06481 763 aa24.96■■□□□ 1.59
RAB40C-202ENST00000509637 ANKRD30AQ9BXX3 1397 aa24.95■■□□□ 1.59
RAB40C-202ENST00000509637 NOS1P29475 1434 aa24.95■■□□□ 1.58
RAB40C-202ENST00000509637 TET3O43151 1660 aa24.91■■□□□ 1.58
RAB40C-202ENST00000509637 ADGRL2O95490 1459 aa24.9■■□□□ 1.58
RAB40C-202ENST00000509637 KANK1Q14678 1352 aa24.9■■□□□ 1.58
RAB40C-202ENST00000509637 RBM33Q96EV2 1170 aaKnown RBP24.89■■□□□ 1.58
RAB40C-202ENST00000509637 EID1Q9Y6B2 187 aa24.89■■□□□ 1.58
RAB40C-202ENST00000509637 EFCAB6Q5THR3 1501 aa24.89■■□□□ 1.57
RAB40C-202ENST00000509637 SLC26A8Q96RN1 970 aa24.88■■□□□ 1.57
RAB40C-202ENST00000509637 FAM50AQ14320 339 aaKnown RBP24.85■■□□□ 1.57
RAB40C-202ENST00000509637 STAG3Q9UJ98 1225 aa24.85■■□□□ 1.57
RAB40C-202ENST00000509637 KDM5AP29375 1690 aaKnown RBP24.85■■□□□ 1.57
RAB40C-202ENST00000509637 RGS17Q9UGC6 210 aaPredicted RBP24.84■■□□□ 1.57
RAB40C-202ENST00000509637 TMEM94Q12767 1356 aa24.83■■□□□ 1.57
RAB40C-202ENST00000509637 KCNA6P17658 529 aa24.83■■□□□ 1.57
RAB40C-202ENST00000509637 ANKRD50Q9ULJ7 1429 aa24.82■■□□□ 1.56
RAB40C-202ENST00000509637 ADGRB3O60242 1522 aa24.81■■□□□ 1.56
RAB40C-202ENST00000509637 MYO5BQ9ULV0 1848 aa24.79■■□□□ 1.56
RAB40C-202ENST00000509637 SLC52A1Q9NWF4 448 aa24.78■■□□□ 1.56
RAB40C-202ENST00000509637 ZFYVE9O95405 1425 aa24.78■■□□□ 1.56
RAB40C-202ENST00000509637 FAM135BQ49AJ0 1406 aa24.77■■□□□ 1.56
RAB40C-202ENST00000509637 PROSER2Q86WR7 435 aaPredicted RBP24.76■■□□□ 1.55
Retrieved 100 of 20,778 RNA–protein pairs in 21.1 ms