RNA–Protein interactions for RNA: ENST00000509632.5

SDHA-212, Transcript of succinate dehydrogenase complex flavoprotein subunit A, humanhuman

TSL 4

Gene SDHA, Length 583 nt, Biotype nonsense mediated decay, Subcellular localisation Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SDHA-212ENST00000509632 CAMSAP1Q5T5Y3 1602 aa33.9■■■■□ 3.02
SDHA-212ENST00000509632 PKD2Q13563 968 aa33.83■■■■□ 3.01
SDHA-212ENST00000509632 MAST1Q9Y2H9 1570 aa33.83■■■■□ 3.01
SDHA-212ENST00000509632 KDM5DQ9BY66 1539 aa33.83■■■■□ 3.01
SDHA-212ENST00000509632 MYO3AQ8NEV4 1616 aa33.81■■■■□ 3
SDHA-212ENST00000509632 TNRQ92752 1358 aa33.81■■■■□ 3
SDHA-212ENST00000509632 CEP170BQ9Y4F5 1589 aaPredicted RBP33.8■■■■□ 3
SDHA-212ENST00000509632 PZPP20742 1482 aa33.78■■■■□ 3
SDHA-212ENST00000509632 RRP7BPQ9NSQ0 103 aa33.77■■■■□ 3
SDHA-212ENST00000509632 FAM135AQ9P2D6 1515 aa33.77■■■■□ 3
SDHA-212ENST00000509632 A2ML1A8K2U0 1454 aa33.76■■■■□ 3
SDHA-212ENST00000509632 ABCC5O15440 1437 aa33.76■■■□□ 2.99
SDHA-212ENST00000509632 PLA2R1Q13018 1463 aa33.76■■■□□ 2.99
SDHA-212ENST00000509632 ZNF142P52746 1687 aaPredicted RBP33.74■■■□□ 2.99
SDHA-212ENST00000509632 PTPN23Q9H3S7 1636 aa33.71■■■□□ 2.99
SDHA-212ENST00000509632 FGD6Q6ZV73 1430 aa33.71■■■□□ 2.99
SDHA-212ENST00000509632 KIF15Q9NS87 1388 aa33.7■■■□□ 2.98
SDHA-212ENST00000509632 TCOF1Q13428 1488 aaKnown RBP33.69■■■□□ 2.98
SDHA-212ENST00000509632 CHIC2Q9UKJ5 165 aa33.69■■■□□ 2.98
SDHA-212ENST00000509632 DUOX2Q9NRD8 1548 aa33.69■■■□□ 2.98
SDHA-212ENST00000509632 DNMT1P26358 1616 aaKnown RBP33.68■■■□□ 2.98
SDHA-212ENST00000509632 ZNF335Q9H4Z2 1342 aaPredicted RBP33.68■■■□□ 2.98
SDHA-212ENST00000509632 LTBP4Q8N2S1 1624 aa33.68■■■□□ 2.98
SDHA-212ENST00000509632 THEMISQ8N1K5 641 aaPredicted RBP33.67■■■□□ 2.98
SDHA-212ENST00000509632 DAPK1P53355 1430 aa33.66■■■□□ 2.98
SDHA-212ENST00000509632 RNF17Q9BXT8 1623 aaKnown RBP33.66■■■□□ 2.98
SDHA-212ENST00000509632 ABCC3O15438 1527 aa33.65■■■□□ 2.98
SDHA-212ENST00000509632 SHANK2Q9UPX8 1470 aa33.64■■■□□ 2.98
SDHA-212ENST00000509632 GRWD1Q9BQ67 446 aaKnown RBP eCLIP33.63■■■□□ 2.97
SDHA-212ENST00000509632 EIF2AK4Q9P2K8 1649 aaKnown RBP33.63■■■□□ 2.97
SDHA-212ENST00000509632 ANKLE2Q86XL3 938 aa33.62■■■□□ 2.97
SDHA-212ENST00000509632 DROSHAQ9NRR4 1374 aaKnown RBP eCLIP33.6■■■□□ 2.97
SDHA-212ENST00000509632 FAM50AQ14320 339 aaKnown RBP33.6■■■□□ 2.97
SDHA-212ENST00000509632 NLRP1Q9C000 1473 aa33.6■■■□□ 2.97
SDHA-212ENST00000509632 ANKRD30AQ9BXX3 1397 aa33.58■■■□□ 2.97
SDHA-212ENST00000509632 ERBINQ96RT1 1412 aa33.57■■■□□ 2.96
SDHA-212ENST00000509632 MROH1Q8NDA8 1641 aa33.57■■■□□ 2.96
SDHA-212ENST00000509632 UGGT1Q9NYU2 1555 aa33.54■■■□□ 2.96
SDHA-212ENST00000509632 CROCC2H7BZ55 1655 aa33.54■■■□□ 2.96
SDHA-212ENST00000509632 ZC3H13Q5T200 1668 aaKnown RBP33.54■■■□□ 2.96
SDHA-212ENST00000509632 ERVK-7P63135 1459 aa33.52■■■□□ 2.96
SDHA-212ENST00000509632 IQSEC2Q5JU85 1478 aa33.5■■■□□ 2.95
SDHA-212ENST00000509632 SPATA31D1Q6ZQQ2 1576 aa33.5■■■□□ 2.95
SDHA-212ENST00000509632 CFAP65Q6ZU64 1925 aaKnown RBP33.49■■■□□ 2.95
SDHA-212ENST00000509632 KANK1Q14678 1352 aa33.48■■■□□ 2.95
SDHA-212ENST00000509632 CEP152O94986 1710 aa33.48■■■□□ 2.95
SDHA-212ENST00000509632 ARHGAP31Q2M1Z3 1444 aa33.45■■■□□ 2.94
SDHA-212ENST00000509632 UBAP1LF5GYI3 381 aa33.44■■■□□ 2.94
SDHA-212ENST00000509632 PRDM15P57071 1507 aaPredicted RBP33.43■■■□□ 2.94
SDHA-212ENST00000509632 NEURL4Q96JN8 1562 aa33.43■■■□□ 2.94
SDHA-212ENST00000509632 NPHP4O75161 1426 aaPredicted RBP33.41■■■□□ 2.94
SDHA-212ENST00000509632 POLR1AO95602 1720 aaPredicted RBP33.4■■■□□ 2.94
SDHA-212ENST00000509632 PPARGC1BQ86YN6 1023 aaKnown RBP33.38■■■□□ 2.93
SDHA-212ENST00000509632 MED14O60244 1454 aa33.37■■■□□ 2.93
SDHA-212ENST00000509632 ADGRL2O95490 1459 aa33.37■■■□□ 2.93
SDHA-212ENST00000509632 DEPDC5O75140 1603 aa33.35■■■□□ 2.93
SDHA-212ENST00000509632 TXNDC2Q86VQ3 553 aa33.33■■■□□ 2.93
SDHA-212ENST00000509632 STAG3Q9UJ98 1225 aa33.33■■■□□ 2.93
SDHA-212ENST00000509632 ANKRD50Q9ULJ7 1429 aa33.31■■■□□ 2.92
SDHA-212ENST00000509632 LTKP29376 864 aa33.31■■■□□ 2.92
SDHA-212ENST00000509632 IDI1Q13907 227 aa33.3■■■□□ 2.92
SDHA-212ENST00000509632 LMTK2Q8IWU2 1503 aa33.28■■■□□ 2.92
SDHA-212ENST00000509632 CPS1P31327 1500 aa33.28■■■□□ 2.92
SDHA-212ENST00000509632 VWDEQ8N2E2 1590 aa33.27■■■□□ 2.92
SDHA-212ENST00000509632 EID1Q9Y6B2 187 aa33.27■■■□□ 2.92
SDHA-212ENST00000509632 UBR1Q8IWV7 1749 aa33.26■■■□□ 2.92
SDHA-212ENST00000509632 ITGAEP38570 1179 aa33.25■■■□□ 2.91
SDHA-212ENST00000509632 TOM1O60784 492 aa33.23■■■□□ 2.91
SDHA-212ENST00000509632 SCAF11Q99590 1463 aaKnown RBP33.23■■■□□ 2.91
SDHA-212ENST00000509632 IQGAP1P46940 1657 aa33.23■■■□□ 2.91
SDHA-212ENST00000509632 ARHGAP23Q9P227 1491 aa33.21■■■□□ 2.91
SDHA-212ENST00000509632 PIP4K2BP78356 416 aa33.21■■■□□ 2.91
SDHA-212ENST00000509632 SCAF1Q9H7N4 1312 aaKnown RBP33.21■■■□□ 2.91
SDHA-212ENST00000509632 SLIT1O75093 1534 aa33.19■■■□□ 2.9
SDHA-212ENST00000509632 TMEM2Q9UHN6 1383 aa33.19■■■□□ 2.9
SDHA-212ENST00000509632 SLC52A1Q9NWF4 448 aa33.18■■■□□ 2.9
SDHA-212ENST00000509632 DISP3Q9P2K9 1392 aa33.18■■■□□ 2.9
SDHA-212ENST00000509632 NOS1P29475 1434 aa33.18■■■□□ 2.9
SDHA-212ENST00000509632 PIK3C2BO00750 1634 aa33.17■■■□□ 2.9
SDHA-212ENST00000509632 ROCK1Q13464 1354 aa33.16■■■□□ 2.9
SDHA-212ENST00000509632 EFCAB6Q5THR3 1501 aa33.15■■■□□ 2.9
SDHA-212ENST00000509632 SYNMO15061 1565 aa33.11■■■□□ 2.89
SDHA-212ENST00000509632 RPRD2Q5VT52 1461 aaKnown RBP33.08■■■□□ 2.89
SDHA-212ENST00000509632 LRRC7Q96NW7 1537 aa33.07■■■□□ 2.88
SDHA-212ENST00000509632 HSPA1LP34931 641 aa33.06■■■□□ 2.88
SDHA-212ENST00000509632 STRCP1A6NGW2 1772 aa33.05■■■□□ 2.88
SDHA-212ENST00000509632 SLC26A8Q96RN1 970 aa33.04■■■□□ 2.88
SDHA-212ENST00000509632 BCANQ96GW7 911 aa33.03■■■□□ 2.88
SDHA-212ENST00000509632 NUP155O75694 1391 aa33.02■■■□□ 2.88
SDHA-212ENST00000509632 TET3O43151 1660 aa33.01■■■□□ 2.87
SDHA-212ENST00000509632 KDM5AP29375 1690 aaKnown RBP33.01■■■□□ 2.87
SDHA-212ENST00000509632 CHGAP10645 457 aaKnown RBP33■■■□□ 2.87
SDHA-212ENST00000509632 SENP3Q9H4L4 574 aaPredicted RBP32.99■■■□□ 2.87
SDHA-212ENST00000509632 ADGRB3O60242 1522 aa32.98■■■□□ 2.87
SDHA-212ENST00000509632 UNC13BO14795 1591 aa32.98■■■□□ 2.87
SDHA-212ENST00000509632 ILDR2Q71H61 639 aa32.98■■■□□ 2.87
SDHA-212ENST00000509632 KCNA6P17658 529 aa32.97■■■□□ 2.87
SDHA-212ENST00000509632 HDGFP51858 240 aaKnown RBP32.97■■■□□ 2.87
SDHA-212ENST00000509632 PPP1R15AO75807 674 aaPredicted RBP32.93■■■□□ 2.86
SDHA-212ENST00000509632 ALKQ9UM73 1620 aa32.91■■■□□ 2.86
Retrieved 100 of 20,778 RNA–protein pairs in 41.2 ms