RNA–Protein interactions for RNA: ENST00000509581.5

PDCD6-207, Transcript of programmed cell death 6, humanhuman

TSL 1 (best) BASIC

Gene PDCD6, Length 1,156 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PDCD6-207ENST00000509581 CNTLNQ9NXG0 1405 aa27.27■■□□□ 1.96
PDCD6-207ENST00000509581 GGT6Q6P531 493 aa27.27■■□□□ 1.96
PDCD6-207ENST00000509581 AEBP2Q6ZN18 517 aaPredicted RBP27.25■■□□□ 1.95
PDCD6-207ENST00000509581 ANKRD50Q9ULJ7 1429 aa27.24■■□□□ 1.95
PDCD6-207ENST00000509581 MROH2AA6NES4 1674 aa27.24■■□□□ 1.95
PDCD6-207ENST00000509581 CLTCQ00610 1675 aaKnown RBP27.21■■□□□ 1.95
PDCD6-207ENST00000509581 ZC3H13Q5T200 1668 aaKnown RBP27.21■■□□□ 1.95
PDCD6-207ENST00000509581 PTPRMP28827 1452 aa27.21■■□□□ 1.95
PDCD6-207ENST00000509581 GCC2Q8IWJ2 1684 aa27.21■■□□□ 1.95
PDCD6-207ENST00000509581 DEPDC5O75140 1603 aa27.19■■□□□ 1.94
PDCD6-207ENST00000509581 KDM5DQ9BY66 1539 aa27.19■■□□□ 1.94
PDCD6-207ENST00000509581 PRDM15P57071 1507 aaPredicted RBP27.17■■□□□ 1.94
PDCD6-207ENST00000509581 KANK1Q14678 1352 aa27.16■■□□□ 1.94
PDCD6-207ENST00000509581 MROH1Q8NDA8 1641 aa27.14■■□□□ 1.94
PDCD6-207ENST00000509581 C3P01024 1663 aa27.14■■□□□ 1.93
PDCD6-207ENST00000509581 WASHC2CQ9Y4E1 1318 aa27.14■■□□□ 1.93
PDCD6-207ENST00000509581 HFM1A2PYH4 1435 aa27.12■■□□□ 1.93
PDCD6-207ENST00000509581 CEP152O94986 1710 aa27.11■■□□□ 1.93
PDCD6-207ENST00000509581 UNC13BO14795 1591 aa27.09■■□□□ 1.93
PDCD6-207ENST00000509581 NAIPQ13075 1403 aa27.09■■□□□ 1.93
PDCD6-207ENST00000509581 SETD1BQ9UPS6 1966 aaKnown RBP27.08■■□□□ 1.93
PDCD6-207ENST00000509581 ABCC3O15438 1527 aa27.08■■□□□ 1.93
PDCD6-207ENST00000509581 GRWD1Q9BQ67 446 aaKnown RBP eCLIP27.07■■□□□ 1.92
PDCD6-207ENST00000509581 ZMYM3Q14202 1370 aa27.07■■□□□ 1.92
PDCD6-207ENST00000509581 CAMSAP1Q5T5Y3 1602 aa27.05■■□□□ 1.92
PDCD6-207ENST00000509581 PLPPR3Q6T4P5 718 aa27.05■■□□□ 1.92
PDCD6-207ENST00000509581 VWDEQ8N2E2 1590 aa27.04■■□□□ 1.92
PDCD6-207ENST00000509581 LMTK2Q8IWU2 1503 aa27.01■■□□□ 1.91
PDCD6-207ENST00000509581 ACIN1Q9UKV3 1341 aaKnown RBP27.01■■□□□ 1.91
PDCD6-207ENST00000509581 NPATQ14207 1427 aa27■■□□□ 1.91
PDCD6-207ENST00000509581 PZPP20742 1482 aa27■■□□□ 1.91
PDCD6-207ENST00000509581 IQGAP3Q86VI3 1631 aa26.99■■□□□ 1.91
PDCD6-207ENST00000509581 CEBPAP49715 358 aaPredicted RBP26.99■■□□□ 1.91
PDCD6-207ENST00000509581 PREX1Q8TCU6 1659 aa26.98■■□□□ 1.91
PDCD6-207ENST00000509581 TET3O43151 1660 aa26.98■■□□□ 1.91
PDCD6-207ENST00000509581 CFAP65Q6ZU64 1925 aaKnown RBP26.96■■□□□ 1.91
PDCD6-207ENST00000509581 ARHGAP31Q2M1Z3 1444 aa26.95■■□□□ 1.9
PDCD6-207ENST00000509581 NUP155O75694 1391 aa26.95■■□□□ 1.9
PDCD6-207ENST00000509581 EFCAB6Q5THR3 1501 aa26.94■■□□□ 1.9
PDCD6-207ENST00000509581 SETD5Q9C0A6 1442 aa26.93■■□□□ 1.9
PDCD6-207ENST00000509581 UHRF1BP1Q6BDS2 1440 aa26.9■■□□□ 1.9
PDCD6-207ENST00000509581 RPRD2Q5VT52 1461 aaKnown RBP26.89■■□□□ 1.9
PDCD6-207ENST00000509581 TRIM52Q96A61 297 aa26.88■■□□□ 1.89
PDCD6-207ENST00000509581 SPATA31D1Q6ZQQ2 1576 aa26.88■■□□□ 1.89
PDCD6-207ENST00000509581 MYO3AQ8NEV4 1616 aa26.87■■□□□ 1.89
PDCD6-207ENST00000509581 TRIM26Q12899 539 aaPredicted RBP26.87■■□□□ 1.89
PDCD6-207ENST00000509581 TNRQ92752 1358 aa26.86■■□□□ 1.89
PDCD6-207ENST00000509581 ERVK-7P63135 1459 aa26.86■■□□□ 1.89
PDCD6-207ENST00000509581 E9PCH4 1651 aa26.83■■□□□ 1.89
PDCD6-207ENST00000509581 ZNF142P52746 1687 aaPredicted RBP26.83■■□□□ 1.89
PDCD6-207ENST00000509581 FBXO31Q5XUX0 539 aaPredicted RBP26.82■■□□□ 1.88
PDCD6-207ENST00000509581 RAB3GAP2Q9H2M9 1393 aa26.81■■□□□ 1.88
PDCD6-207ENST00000509581 LMTK3Q96Q04 1460 aa26.81■■□□□ 1.88
PDCD6-207ENST00000509581 NLRP1Q9C000 1473 aa26.81■■□□□ 1.88
PDCD6-207ENST00000509581 HRCP23327 699 aa26.78■■□□□ 1.88
PDCD6-207ENST00000509581 CEP170BQ9Y4F5 1589 aaPredicted RBP26.78■■□□□ 1.88
PDCD6-207ENST00000509581 A2ML1A8K2U0 1454 aa26.75■■□□□ 1.87
PDCD6-207ENST00000509581 SLC4A1APQ9BWU0 796 aaKnown RBP26.75■■□□□ 1.87
PDCD6-207ENST00000509581 SPHKAPQ2M3C7 1700 aa26.75■■□□□ 1.87
PDCD6-207ENST00000509581 NOS1P29475 1434 aa26.74■■□□□ 1.87
PDCD6-207ENST00000509581 SYNMO15061 1565 aa26.71■■□□□ 1.87
PDCD6-207ENST00000509581 SLC52A1Q9NWF4 448 aa26.69■■□□□ 1.86
PDCD6-207ENST00000509581 UGGT1Q9NYU2 1555 aa26.69■■□□□ 1.86
PDCD6-207ENST00000509581 KDM5AP29375 1690 aaKnown RBP26.69■■□□□ 1.86
PDCD6-207ENST00000509581 PKD2Q13563 968 aa26.67■■□□□ 1.86
PDCD6-207ENST00000509581 MPHOSPH9Q99550 1183 aa26.66■■□□□ 1.86
PDCD6-207ENST00000509581 PIK3C2BO00750 1634 aa26.65■■□□□ 1.86
PDCD6-207ENST00000509581 UBR1Q8IWV7 1749 aa26.65■■□□□ 1.86
PDCD6-207ENST00000509581 THEMISQ8N1K5 641 aaPredicted RBP26.64■■□□□ 1.86
PDCD6-207ENST00000509581 STAG3Q9UJ98 1225 aa26.64■■□□□ 1.86
PDCD6-207ENST00000509581 TRPM2O94759 1503 aa26.63■■□□□ 1.85
PDCD6-207ENST00000509581 PTPRTO14522 1441 aa26.63■■□□□ 1.85
PDCD6-207ENST00000509581 HSPA2P54652 639 aa26.62■■□□□ 1.85
PDCD6-207ENST00000509581 PLA2R1Q13018 1463 aa26.62■■□□□ 1.85
PDCD6-207ENST00000509581 ADGRB3O60242 1522 aa26.6■■□□□ 1.85
PDCD6-207ENST00000509581 IDI1Q13907 227 aa26.59■■□□□ 1.85
PDCD6-207ENST00000509581 KIF1BO60333 1816 aa26.58■■□□□ 1.85
PDCD6-207ENST00000509581 POLR1AO95602 1720 aaPredicted RBP26.57■■□□□ 1.84
PDCD6-207ENST00000509581 MYO5BQ9ULV0 1848 aa26.55■■□□□ 1.84
PDCD6-207ENST00000509581 STRCQ7RTU9 1775 aa26.54■■□□□ 1.84
PDCD6-207ENST00000509581 TMEM131LA2VDJ0 1609 aa26.53■■□□□ 1.84
PDCD6-207ENST00000509581 CLTCL1P53675 1640 aa26.53■■□□□ 1.84
PDCD6-207ENST00000509581 DMRT2Q9Y5R5 561 aa26.52■■□□□ 1.84
PDCD6-207ENST00000509581 SLIT1O75093 1534 aa26.5■■□□□ 1.83
PDCD6-207ENST00000509581 CHGAP10645 457 aaKnown RBP26.5■■□□□ 1.83
PDCD6-207ENST00000509581 CCDC144AA2RUR9 1427 aa26.49■■□□□ 1.83
PDCD6-207ENST00000509581 FOXD1Q16676 465 aa26.49■■□□□ 1.83
PDCD6-207ENST00000509581 ANKLE2Q86XL3 938 aa26.49■■□□□ 1.83
PDCD6-207ENST00000509581 HDGFP51858 240 aaKnown RBP26.47■■□□□ 1.83
PDCD6-207ENST00000509581 EID1Q9Y6B2 187 aa26.47■■□□□ 1.83
PDCD6-207ENST00000509581 ARHGAP23Q9P227 1491 aa26.47■■□□□ 1.83
PDCD6-207ENST00000509581 TMEM2Q9UHN6 1383 aa26.46■■□□□ 1.83
PDCD6-207ENST00000509581 PCGF6Q9BYE7 350 aa26.44■■□□□ 1.82
PDCD6-207ENST00000509581 SCAF11Q99590 1463 aaKnown RBP26.43■■□□□ 1.82
PDCD6-207ENST00000509581 NCKAP5LQ9HCH0 1330 aa26.41■■□□□ 1.82
PDCD6-207ENST00000509581 ABCF1Q8NE71 845 aaKnown RBP eCLIP26.4■■□□□ 1.82
PDCD6-207ENST00000509581 IQGAP1P46940 1657 aa26.4■■□□□ 1.82
PDCD6-207ENST00000509581 NEURL4Q96JN8 1562 aa26.39■■□□□ 1.82
PDCD6-207ENST00000509581 MED14O60244 1454 aa26.39■■□□□ 1.82
PDCD6-207ENST00000509581 ZNF326Q5BKZ1 582 aaKnown RBP26.39■■□□□ 1.82
Retrieved 100 of 20,778 RNA–protein pairs in 22.7 ms