RNA–Protein interactions for RNA: ENST00000509351.5

VNN3-211, Transcript of vanin 3, humanhuman

TSL 1 (best) BASIC

Gene VNN3, Length 1,700 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VNN3-211ENST00000509351 E9PSI1 815 aa8.49□□□□□ -1.05
VNN3-211ENST00000509351 PDIA6Q15084 440 aa8.49□□□□□ -1.05
VNN3-211ENST00000509351 SPDYE16A6NNV3 312 aaPredicted RBP8.48□□□□□ -1.05
VNN3-211ENST00000509351 MS4A1P11836 297 aa8.48□□□□□ -1.05
VNN3-211ENST00000509351 SLAIN1Q8ND83 568 aa8.48□□□□□ -1.05
VNN3-211ENST00000509351 MS4A4AQ96JQ5 239 aa8.48□□□□□ -1.05
VNN3-211ENST00000509351 NUTM2FA1L443 756 aa8.46□□□□□ -1.06
VNN3-211ENST00000509351 SH3D19Q5HYK7 790 aa8.46□□□□□ -1.06
VNN3-211ENST00000509351 PPP1R15BQ5SWA1 713 aa8.46□□□□□ -1.06
VNN3-211ENST00000509351 GIGYF2Q6Y7W6 1299 aaKnown RBP8.46□□□□□ -1.06
VNN3-211ENST00000509351 GNPATO15228 680 aa8.45□□□□□ -1.06
VNN3-211ENST00000509351 EMILIN3Q9NT22 766 aa8.45□□□□□ -1.06
VNN3-211ENST00000509351 HMGB1P09429 215 aaKnown RBP8.44□□□□□ -1.06
VNN3-211ENST00000509351 FECHP22830 423 aa8.44□□□□□ -1.06
VNN3-211ENST00000509351 TIE1P35590 1138 aa8.43□□□□□ -1.06
VNN3-211ENST00000509351 OXER1Q8TDS5 423 aa8.43□□□□□ -1.06
VNN3-211ENST00000509351 COG6Q9Y2V7 657 aa8.43□□□□□ -1.06
VNN3-211ENST00000509351 CCDC61Q9Y6R9 512 aa8.43□□□□□ -1.06
VNN3-211ENST00000509351 PPP1R15AO75807 674 aaPredicted RBP8.42□□□□□ -1.06
VNN3-211ENST00000509351 IFNL1Q8IU54 200 aa8.42□□□□□ -1.06
VNN3-211ENST00000509351 ZNF330Q9Y3S2 320 aaPredicted RBP8.42□□□□□ -1.06
VNN3-211ENST00000509351 HSP90B1P14625 803 aaKnown RBP8.41□□□□□ -1.06
VNN3-211ENST00000509351 REPIN1Q9BWE0 567 aaKnown RBP8.41□□□□□ -1.06
VNN3-211ENST00000509351 COLQQ9Y215 455 aaPredicted RBP8.41□□□□□ -1.06
VNN3-211ENST00000509351 HIC1Q14526 733 aa8.4□□□□□ -1.06
VNN3-211ENST00000509351 KRTAP3-3Q9BYR6 98 aa8.4□□□□□ -1.06
VNN3-211ENST00000509351 KRTAP3-2Q9BYR7 98 aa8.4□□□□□ -1.06
VNN3-211ENST00000509351 BMP2KQ9NSY1 1161 aaPredicted RBP8.4□□□□□ -1.06
VNN3-211ENST00000509351 ACIN1Q9UKV3 1341 aaKnown RBP8.39□□□□□ -1.07
VNN3-211ENST00000509351 GRXCR2A6NFK2 248 aa8.39□□□□□ -1.07
VNN3-211ENST00000509351 PATL2C9JE40 543 aaKnown RBP8.39□□□□□ -1.07
VNN3-211ENST00000509351 SEC24BO95487 1268 aa8.39□□□□□ -1.07
VNN3-211ENST00000509351 CDK11BP21127 795 aaKnown RBP8.39□□□□□ -1.07
VNN3-211ENST00000509351 PDE4CQ08493 712 aa8.39□□□□□ -1.07
VNN3-211ENST00000509351 SKIV2LQ15477 1246 aaKnown RBP8.39□□□□□ -1.07
VNN3-211ENST00000509351 IER5LQ5T953 404 aa8.39□□□□□ -1.07
VNN3-211ENST00000509351 GPHNQ9NQX3 736 aaPredicted RBP8.39□□□□□ -1.07
VNN3-211ENST00000509351 CDK11AQ9UQ88 783 aaPredicted RBP8.39□□□□□ -1.07
VNN3-211ENST00000509351 SPDYE5A6NIY4 337 aa8.38□□□□□ -1.07
VNN3-211ENST00000509351 PROCA1Q8NCQ7 364 aaPredicted RBP8.37□□□□□ -1.07
VNN3-211ENST00000509351 KIF12Q96FN5 646 aa8.37□□□□□ -1.07
VNN3-211ENST00000509351 PUS7Q96PZ0 661 aaKnown RBP8.37□□□□□ -1.07
VNN3-211ENST00000509351 SNPHO15079 494 aa8.36□□□□□ -1.07
VNN3-211ENST00000509351 FCHSD2O94868 740 aa8.36□□□□□ -1.07
VNN3-211ENST00000509351 MARVELD3Q96A59 401 aa8.36□□□□□ -1.07
VNN3-211ENST00000509351 AMOTL2Q9Y2J4 779 aa8.36□□□□□ -1.07
VNN3-211ENST00000509351 MYT1Q01538 1121 aa8.35□□□□□ -1.07
VNN3-211ENST00000509351 KCNA1Q09470 495 aa8.35□□□□□ -1.07
VNN3-211ENST00000509351 USP35Q9P2H5 1018 aa8.35□□□□□ -1.07
VNN3-211ENST00000509351 ATP1B4Q9UN42 357 aaPredicted RBP8.35□□□□□ -1.07
VNN3-211ENST00000509351 BRD1O95696 1058 aa8.34□□□□□ -1.07
VNN3-211ENST00000509351 OSBPP22059 807 aa8.34□□□□□ -1.07
VNN3-211ENST00000509351 MAP3K13O43283 966 aa8.33□□□□□ -1.08
VNN3-211ENST00000509351 SNRKQ9NRH2 765 aa8.33□□□□□ -1.08
VNN3-211ENST00000509351 DSG2Q14126 1118 aa8.32□□□□□ -1.08
VNN3-211ENST00000509351 CALR3Q96L12 384 aaKnown RBP8.32□□□□□ -1.08
VNN3-211ENST00000509351 TMUB1Q9BVT8 246 aa8.32□□□□□ -1.08
VNN3-211ENST00000509351 POLR3EQ9NVU0 708 aa8.32□□□□□ -1.08
VNN3-211ENST00000509351 CCDC27Q2M243 656 aa8.31□□□□□ -1.08
VNN3-211ENST00000509351 GNL3Q9BVP2 549 aaKnown RBP eCLIP8.31□□□□□ -1.08
VNN3-211ENST00000509351 BANK1Q8NDB2 785 aa8.29□□□□□ -1.08
VNN3-211ENST00000509351 TTBK1Q5TCY1 1321 aaPredicted RBP8.29□□□□□ -1.08
VNN3-211ENST00000509351 SSTR3P32745 418 aaPredicted RBP8.29□□□□□ -1.08
VNN3-211ENST00000509351 CLCN1P35523 988 aa8.28□□□□□ -1.08
VNN3-211ENST00000509351 GLMNQ92990 594 aa8.28□□□□□ -1.08
VNN3-211ENST00000509351 GPCPD1Q9NPB8 672 aa8.28□□□□□ -1.08
VNN3-211ENST00000509351 TTLL13PA6NNM8 815 aa8.27□□□□□ -1.09
VNN3-211ENST00000509351 PTGDRQ13258 359 aa8.27□□□□□ -1.09
VNN3-211ENST00000509351 RNF166Q96A37 237 aaPredicted RBP8.27□□□□□ -1.09
VNN3-211ENST00000509351 BEGAINQ9BUH8 593 aa8.27□□□□□ -1.09
VNN3-211ENST00000509351 GDPD2Q9HCC8 539 aa8.27□□□□□ -1.09
VNN3-211ENST00000509351 USTQ9Y2C2 406 aa8.27□□□□□ -1.09
VNN3-211ENST00000509351 EIF5BO60841 1220 aaKnown RBP8.26□□□□□ -1.09
VNN3-211ENST00000509351 PBXIP1Q96AQ6 731 aa8.26□□□□□ -1.09
VNN3-211ENST00000509351 RFC5P40937 340 aa8.26□□□□□ -1.09
VNN3-211ENST00000509351 MDM2Q00987 491 aaPredicted RBP8.26□□□□□ -1.09
VNN3-211ENST00000509351 RSPH4AQ5TD94 716 aa8.26□□□□□ -1.09
VNN3-211ENST00000509351 MYT1LQ9UL68 1186 aa8.26□□□□□ -1.09
VNN3-211ENST00000509351 TRPC6Q9Y210 931 aa8.26□□□□□ -1.09
VNN3-211ENST00000509351 IVNS1ABPQ9Y6Y0 642 aa8.26□□□□□ -1.09
VNN3-211ENST00000509351 POTEB3A0JP26 581 aa8.25□□□□□ -1.09
VNN3-211ENST00000509351 POM121CA8CG34 1229 aa8.25□□□□□ -1.09
VNN3-211ENST00000509351 TBC1D12O60347 775 aa8.25□□□□□ -1.09
VNN3-211ENST00000509351 EMP3P54852 163 aa8.25□□□□□ -1.09
VNN3-211ENST00000509351 GOLGA2Q08379 1002 aa8.25□□□□□ -1.09
VNN3-211ENST00000509351 POTEBQ6S5H4 581 aa8.25□□□□□ -1.09
VNN3-211ENST00000509351 HS3ST6Q96QI5 342 aa8.25□□□□□ -1.09
VNN3-211ENST00000509351 FOXK1P85037 733 aa8.24□□□□□ -1.09
VNN3-211ENST00000509351 MYSM1Q5VVJ2 828 aa8.24□□□□□ -1.09
VNN3-211ENST00000509351 SND1Q7KZF4 910 aaKnown RBP eCLIP8.24□□□□□ -1.09
VNN3-211ENST00000509351 MAP3K9P80192 1104 aa8.23□□□□□ -1.09
VNN3-211ENST00000509351 WWC1Q8IX03 1113 aa8.23□□□□□ -1.09
VNN3-211ENST00000509351 TRBV21OR9-2A0A075B6F4 123 aaPredicted RBP8.23□□□□□ -1.09
VNN3-211ENST00000509351 CARNS1A5YM72 827 aa8.23□□□□□ -1.09
VNN3-211ENST00000509351 CSB-PGBD3P0DP91 1061 aa8.23□□□□□ -1.09
VNN3-211ENST00000509351 PHOX2BQ99453 314 aa8.23□□□□□ -1.09
VNN3-211ENST00000509351 UNCXA6NJT0 531 aa8.22□□□□□ -1.09
VNN3-211ENST00000509351 PRIM1P49642 420 aaKnown RBP8.22□□□□□ -1.09
VNN3-211ENST00000509351 CLK2P49760 499 aaKnown RBP8.22□□□□□ -1.09
VNN3-211ENST00000509351 FBXO31Q5XUX0 539 aaPredicted RBP8.22□□□□□ -1.09
Retrieved 100 of 20,778 RNA–protein pairs in 34.5 ms