RNA–Protein interactions for RNA: ENST00000509234.1

TRAPPC13-210, Transcript of trafficking protein particle complex 13, humanhuman

TSL 2

Gene TRAPPC13, Length 976 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRAPPC13-210ENST00000509234 ZNF316A6NFI3 1004 aaPredicted RBP9.43□□□□□ -0.9
TRAPPC13-210ENST00000509234 EN1Q05925 392 aaPredicted RBP9.43□□□□□ -0.9
TRAPPC13-210ENST00000509234 EPAS1Q99814 870 aa9.43□□□□□ -0.9
TRAPPC13-210ENST00000509234 JPH4Q96JJ6 628 aa9.42□□□□□ -0.9
TRAPPC13-210ENST00000509234 FOSBP53539 338 aa9.41□□□□□ -0.9
TRAPPC13-210ENST00000509234 PTGDRQ13258 359 aa9.41□□□□□ -0.9
TRAPPC13-210ENST00000509234 NPDC1Q9NQX5 325 aaPredicted RBP9.41□□□□□ -0.9
TRAPPC13-210ENST00000509234 PLA2G2EQ9NZK7 142 aa9.41□□□□□ -0.9
TRAPPC13-210ENST00000509234 AK7Q96M32 723 aa9.4□□□□□ -0.9
TRAPPC13-210ENST00000509234 GNPATO15228 680 aa9.39□□□□□ -0.91
TRAPPC13-210ENST00000509234 HIC1Q14526 733 aa9.39□□□□□ -0.91
TRAPPC13-210ENST00000509234 FCHSD2O94868 740 aa9.38□□□□□ -0.91
TRAPPC13-210ENST00000509234 MAP2K5Q13163 448 aa9.38□□□□□ -0.91
TRAPPC13-210ENST00000509234 TYW1BQ6NUM6 668 aa9.38□□□□□ -0.91
TRAPPC13-210ENST00000509234 KHSRPQ92945 711 aaKnown RBP eCLIP9.38□□□□□ -0.91
TRAPPC13-210ENST00000509234 MINK1Q8N4C8 1332 aaPredicted RBP9.37□□□□□ -0.91
TRAPPC13-210ENST00000509234 NUTM2FA1L443 756 aa9.37□□□□□ -0.91
TRAPPC13-210ENST00000509234 ARSIQ5FYB1 569 aa9.37□□□□□ -0.91
TRAPPC13-210ENST00000509234 CDHR5Q9HBB8 845 aa9.37□□□□□ -0.91
TRAPPC13-210ENST00000509234 TRIM66O15016 1216 aa9.36□□□□□ -0.91
TRAPPC13-210ENST00000509234 NUDT7P0C024 238 aa9.36□□□□□ -0.91
TRAPPC13-210ENST00000509234 FECHP22830 423 aa9.36□□□□□ -0.91
TRAPPC13-210ENST00000509234 FBXW7Q969H0 707 aa9.36□□□□□ -0.91
TRAPPC13-210ENST00000509234 IRF6O14896 467 aa9.34□□□□□ -0.91
TRAPPC13-210ENST00000509234 LSM11P83369 360 aaKnown RBP eCLIP9.34□□□□□ -0.91
TRAPPC13-210ENST00000509234 TMEM132AQ24JP5 1023 aa9.34□□□□□ -0.91
TRAPPC13-210ENST00000509234 TSR1Q2NL82 804 aaKnown RBP9.34□□□□□ -0.91
TRAPPC13-210ENST00000509234 CCDC102AQ96A19 550 aa9.33□□□□□ -0.92
TRAPPC13-210ENST00000509234 MAP3K7O43318 606 aa9.31□□□□□ -0.92
TRAPPC13-210ENST00000509234 AMHR2Q16671 573 aa9.31□□□□□ -0.92
TRAPPC13-210ENST00000509234 KRI1Q8N9T8 703 aaKnown RBP9.31□□□□□ -0.92
TRAPPC13-210ENST00000509234 ZDHHC16Q969W1 377 aa9.31□□□□□ -0.92
TRAPPC13-210ENST00000509234 HCSTQ9UBK5 93 aa9.31□□□□□ -0.92
TRAPPC13-210ENST00000509234 PDE4DQ08499 809 aa9.3□□□□□ -0.92
TRAPPC13-210ENST00000509234 NEUROD2Q15784 382 aa9.3□□□□□ -0.92
TRAPPC13-210ENST00000509234 C6orf132Q5T0Z8 1188 aa9.3□□□□□ -0.92
TRAPPC13-210ENST00000509234 ZNF454Q8N9F8 522 aa9.3□□□□□ -0.92
TRAPPC13-210ENST00000509234 TTC13Q8NBP0 860 aa9.3□□□□□ -0.92
TRAPPC13-210ENST00000509234 ADAM33Q9BZ11 813 aa9.3□□□□□ -0.92
TRAPPC13-210ENST00000509234 LHX6Q9UPM6 363 aa9.3□□□□□ -0.92
TRAPPC13-210ENST00000509234 RBM33Q96EV2 1170 aaKnown RBP9.29□□□□□ -0.92
TRAPPC13-210ENST00000509234 RBM27Q9P2N5 1060 aaKnown RBP9.28□□□□□ -0.92
TRAPPC13-210ENST00000509234 CERKQ8TCT0 537 aa9.27□□□□□ -0.93
TRAPPC13-210ENST00000509234 PSDA5PKW4 1024 aaPredicted RBP9.26□□□□□ -0.93
TRAPPC13-210ENST00000509234 BCL2L12Q9HB09 334 aa9.26□□□□□ -0.93
TRAPPC13-210ENST00000509234 GPBP1L1Q9HC44 474 aaPredicted RBP9.26□□□□□ -0.93
TRAPPC13-210ENST00000509234 TMUB1Q9BVT8 246 aa9.25□□□□□ -0.93
TRAPPC13-210ENST00000509234 KDM4CQ9H3R0 1056 aa9.24□□□□□ -0.93
TRAPPC13-210ENST00000509234 PARP9Q8IXQ6 854 aa9.23□□□□□ -0.93
TRAPPC13-210ENST00000509234 PPP4R3BQ5MIZ7 849 aa9.22□□□□□ -0.93
TRAPPC13-210ENST00000509234 PHOX2BQ99453 314 aa9.22□□□□□ -0.93
TRAPPC13-210ENST00000509234 AXIN2Q9Y2T1 843 aa9.22□□□□□ -0.93
TRAPPC13-210ENST00000509234 PBX2P40425 430 aa9.21□□□□□ -0.94
TRAPPC13-210ENST00000509234 PADI6Q6TGC4 694 aa9.21□□□□□ -0.94
TRAPPC13-210ENST00000509234 COL9A1P20849 921 aa9.2□□□□□ -0.94
TRAPPC13-210ENST00000509234 REPIN1Q9BWE0 567 aaKnown RBP9.2□□□□□ -0.94
TRAPPC13-210ENST00000509234 FAM198AQ9UFP1 575 aa9.2□□□□□ -0.94
TRAPPC13-210ENST00000509234 ADGRG1Q9Y653 693 aa9.2□□□□□ -0.94
TRAPPC13-210ENST00000509234 PPP1R3GB7ZBB8 358 aa9.19□□□□□ -0.94
TRAPPC13-210ENST00000509234 PRSS12P56730 875 aa9.19□□□□□ -0.94
TRAPPC13-210ENST00000509234 METTL3Q86U44 580 aaKnown RBP9.18□□□□□ -0.94
TRAPPC13-210ENST00000509234 PXYLP1Q8TE99 480 aa9.18□□□□□ -0.94
TRAPPC13-210ENST00000509234 CDCA7LQ96GN5 454 aa9.17□□□□□ -0.94
TRAPPC13-210ENST00000509234 PLEKHG3A1L390 1219 aa9.16□□□□□ -0.94
TRAPPC13-210ENST00000509234 POTEEQ6S8J3 1075 aa9.16□□□□□ -0.94
TRAPPC13-210ENST00000509234 PTPREP23469 700 aa9.15□□□□□ -0.94
TRAPPC13-210ENST00000509234 FAM117AQ9C073 453 aa9.15□□□□□ -0.94
TRAPPC13-210ENST00000509234 TSKSQ9UJT2 592 aa9.15□□□□□ -0.94
TRAPPC13-210ENST00000509234 OATP04181 439 aa9.14□□□□□ -0.95
TRAPPC13-210ENST00000509234 FAM161AQ3B820 660 aa9.14□□□□□ -0.95
TRAPPC13-210ENST00000509234 GIGYF2Q6Y7W6 1299 aaKnown RBP9.14□□□□□ -0.95
TRAPPC13-210ENST00000509234 GTF3C3Q9Y5Q9 886 aa9.14□□□□□ -0.95
TRAPPC13-210ENST00000509234 C3orf80F5H4A9 247 aa9.13□□□□□ -0.95
TRAPPC13-210ENST00000509234 ONECUT3O60422 494 aaPredicted RBP9.13□□□□□ -0.95
TRAPPC13-210ENST00000509234 MS4A1P11836 297 aa9.13□□□□□ -0.95
TRAPPC13-210ENST00000509234 ADGRD1Q6QNK2 874 aa9.13□□□□□ -0.95
TRAPPC13-210ENST00000509234 EYA1Q99502 592 aa9.13□□□□□ -0.95
TRAPPC13-210ENST00000509234 DAXXQ9UER7 740 aaPredicted RBP9.13□□□□□ -0.95
TRAPPC13-210ENST00000509234 GPCPD1Q9NPB8 672 aa9.12□□□□□ -0.95
TRAPPC13-210ENST00000509234 TRIM6-TRIM34B2RNG4 842 aa9.11□□□□□ -0.95
TRAPPC13-210ENST00000509234 CLCN1P35523 988 aa9.11□□□□□ -0.95
TRAPPC13-210ENST00000509234 DDRGK1Q96HY6 314 aa9.11□□□□□ -0.95
TRAPPC13-210ENST00000509234 IRX2Q9BZI1 471 aaPredicted RBP9.11□□□□□ -0.95
TRAPPC13-210ENST00000509234 ZBED2Q9BTP6 218 aa9.1□□□□□ -0.95
TRAPPC13-210ENST00000509234 SLC4A5Q9BY07 1137 aa9.1□□□□□ -0.95
TRAPPC13-210ENST00000509234 ARHGAP33O14559 1287 aa9.09□□□□□ -0.95
TRAPPC13-210ENST00000509234 MDM2Q00987 491 aaPredicted RBP9.09□□□□□ -0.95
TRAPPC13-210ENST00000509234 TTLL12Q14166 644 aaPredicted RBP9.09□□□□□ -0.95
TRAPPC13-210ENST00000509234 IL27Q8NEV9 243 aa9.09□□□□□ -0.95
TRAPPC13-210ENST00000509234 FAM217BQ9NTX9 383 aaPredicted RBP9.09□□□□□ -0.95
TRAPPC13-210ENST00000509234 RBM46Q8TBY0 533 aaKnown RBP9.08□□□□□ -0.96
TRAPPC13-210ENST00000509234 PROX2Q3B8N5 592 aa9.07□□□□□ -0.96
TRAPPC13-210ENST00000509234 KCTD12Q96CX2 325 aaKnown RBP9.07□□□□□ -0.96
TRAPPC13-210ENST00000509234 KCNK17Q96T54 332 aa9.07□□□□□ -0.96
TRAPPC13-210ENST00000509234 GOPCQ9HD26 462 aa9.07□□□□□ -0.96
TRAPPC13-210ENST00000509234 RPL17-C18orf32A0A0A6YYL6 228 aaKnown RBP9.06□□□□□ -0.96
TRAPPC13-210ENST00000509234 PSEN2P49810 448 aa9.06□□□□□ -0.96
TRAPPC13-210ENST00000509234 NLRP7Q8WX94 980 aa9.06□□□□□ -0.96
TRAPPC13-210ENST00000509234 STAC3Q96MF2 364 aa9.06□□□□□ -0.96
TRAPPC13-210ENST00000509234 RCCD1A6NED2 376 aa9.05□□□□□ -0.96
Retrieved 100 of 20,778 RNA–protein pairs in 12 ms