RNA–Protein interactions for RNA: ENST00000509093.5

COPS4-206, Transcript of COP9 signalosome subunit 4, humanhuman

TSL 2 BASIC

Gene COPS4, Length 2,273 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COPS4-206ENST00000509093 DIP2BQ9P265 1576 aa15.66■□□□□ 0.1
COPS4-206ENST00000509093 ERBINQ96RT1 1412 aa15.66■□□□□ 0.1
COPS4-206ENST00000509093 RAPGEF3O95398 923 aa15.65■□□□□ 0.1
COPS4-206ENST00000509093 CFAP74Q9C0B2 1584 aa15.65■□□□□ 0.1
COPS4-206ENST00000509093 POGZQ7Z3K3 1410 aa15.65■□□□□ 0.1
COPS4-206ENST00000509093 FAM135AQ9P2D6 1515 aa15.65■□□□□ 0.1
COPS4-206ENST00000509093 UNC13BO14795 1591 aa15.64■□□□□ 0.09
COPS4-206ENST00000509093 ZNF518AQ6AHZ1 1483 aa15.64■□□□□ 0.09
COPS4-206ENST00000509093 NEO1Q92859 1461 aa15.64■□□□□ 0.09
COPS4-206ENST00000509093 KIDINS220Q9ULH0 1771 aa15.63■□□□□ 0.09
COPS4-206ENST00000509093 RPRD2Q5VT52 1461 aaKnown RBP15.62■□□□□ 0.09
COPS4-206ENST00000509093 L3MBTL2Q969R5 705 aa15.62■□□□□ 0.09
COPS4-206ENST00000509093 KDM5CP41229 1560 aa15.61■□□□□ 0.09
COPS4-206ENST00000509093 MAGI2Q86UL8 1455 aa15.6■□□□□ 0.09
COPS4-206ENST00000509093 MSH5O43196 834 aa15.6■□□□□ 0.09
COPS4-206ENST00000509093 DHX29Q7Z478 1369 aaKnown RBP15.6■□□□□ 0.09
COPS4-206ENST00000509093 KIF3BO15066 747 aa15.59■□□□□ 0.09
COPS4-206ENST00000509093 FANCIQ9NVI1 1328 aa15.59■□□□□ 0.09
COPS4-206ENST00000509093 TSPOAP1O95153 1857 aa15.58■□□□□ 0.09
COPS4-206ENST00000509093 IQGAP3Q86VI3 1631 aa15.58■□□□□ 0.08
COPS4-206ENST00000509093 MLH3Q9UHC1 1453 aa15.58■□□□□ 0.08
COPS4-206ENST00000509093 PPRC1Q5VV67 1664 aaKnown RBP15.57■□□□□ 0.08
COPS4-206ENST00000509093 TEX14Q8IWB6 1497 aa15.57■□□□□ 0.08
COPS4-206ENST00000509093 SLC24A1O60721 1099 aa15.56■□□□□ 0.08
COPS4-206ENST00000509093 HECW2Q9P2P5 1572 aa15.56■□□□□ 0.08
COPS4-206ENST00000509093 A2MP01023 1474 aa15.55■□□□□ 0.08
COPS4-206ENST00000509093 PLA2R1Q13018 1463 aa15.55■□□□□ 0.08
COPS4-206ENST00000509093 RICTORQ6R327 1708 aa15.54■□□□□ 0.08
COPS4-206ENST00000509093 FRMPD1Q5SYB0 1578 aa15.54■□□□□ 0.08
COPS4-206ENST00000509093 ABCA6Q8N139 1617 aa15.54■□□□□ 0.08
COPS4-206ENST00000509093 HIRIP3Q9BW71 556 aaPredicted RBP15.54■□□□□ 0.08
COPS4-206ENST00000509093 KIF13AQ9H1H9 1805 aa15.53■□□□□ 0.08
COPS4-206ENST00000509093 DEPDC5O75140 1603 aa15.53■□□□□ 0.08
COPS4-206ENST00000509093 NBPF8Q3BBV2 869 aa15.53■□□□□ 0.08
COPS4-206ENST00000509093 MROH1Q8NDA8 1641 aa15.52■□□□□ 0.08
COPS4-206ENST00000509093 YEATS2Q9ULM3 1422 aa15.52■□□□□ 0.08
COPS4-206ENST00000509093 CCER2I3L3R5 266 aa15.52■□□□□ 0.07
COPS4-206ENST00000509093 EIF2AK4Q9P2K8 1649 aaKnown RBP15.5■□□□□ 0.07
COPS4-206ENST00000509093 PRKCSHP14314 528 aaPredicted RBP15.5■□□□□ 0.07
COPS4-206ENST00000509093 VWDEQ8N2E2 1590 aa15.49■□□□□ 0.07
COPS4-206ENST00000509093 DIP2CQ9Y2E4 1556 aa15.49■□□□□ 0.07
COPS4-206ENST00000509093 ERICH6Q7L0X2 663 aa15.49■□□□□ 0.07
COPS4-206ENST00000509093 PRDM15P57071 1507 aaPredicted RBP15.48■□□□□ 0.07
COPS4-206ENST00000509093 COL17A1Q9UMD9 1497 aaPredicted RBP15.48■□□□□ 0.07
COPS4-206ENST00000509093 E9PCH4 1651 aa15.48■□□□□ 0.07
COPS4-206ENST00000509093 KANK1Q14678 1352 aa15.48■□□□□ 0.07
COPS4-206ENST00000509093 DDX10Q13206 875 aaKnown RBP15.47■□□□□ 0.07
COPS4-206ENST00000509093 GGT6Q6P531 493 aa15.47■□□□□ 0.07
COPS4-206ENST00000509093 CCDC144AA2RUR9 1427 aa15.47■□□□□ 0.07
COPS4-206ENST00000509093 ZNF326Q5BKZ1 582 aaKnown RBP15.45■□□□□ 0.06
COPS4-206ENST00000509093 KDM2AQ9Y2K7 1162 aa15.45■□□□□ 0.06
COPS4-206ENST00000509093 ATP10AO60312 1499 aa15.44■□□□□ 0.06
COPS4-206ENST00000509093 RNF17Q9BXT8 1623 aaKnown RBP15.44■□□□□ 0.06
COPS4-206ENST00000509093 TET3O43151 1660 aa15.44■□□□□ 0.06
COPS4-206ENST00000509093 RGL3Q3MIN7 710 aa15.44■□□□□ 0.06
COPS4-206ENST00000509093 ZMYM4Q5VZL5 1548 aa15.43■□□□□ 0.06
COPS4-206ENST00000509093 DCAF11Q8TEB1 546 aa15.43■□□□□ 0.06
COPS4-206ENST00000509093 PTPRTO14522 1441 aa15.41■□□□□ 0.06
COPS4-206ENST00000509093 CEP152O94986 1710 aa15.41■□□□□ 0.06
COPS4-206ENST00000509093 ANP32CO43423 234 aa15.41■□□□□ 0.06
COPS4-206ENST00000509093 HSPA5P11021 654 aaKnown RBP15.41■□□□□ 0.06
COPS4-206ENST00000509093 BCORL1Q5H9F3 1711 aa15.4■□□□□ 0.06
COPS4-206ENST00000509093 EFCAB6Q5THR3 1501 aa15.39■□□□□ 0.05
COPS4-206ENST00000509093 LMTK2Q8IWU2 1503 aa15.39■□□□□ 0.05
COPS4-206ENST00000509093 WASHC2CQ9Y4E1 1318 aa15.39■□□□□ 0.05
COPS4-206ENST00000509093 TRPM2O94759 1503 aa15.38■□□□□ 0.05
COPS4-206ENST00000509093 SPHKAPQ2M3C7 1700 aa15.38■□□□□ 0.05
COPS4-206ENST00000509093 UHRF1BP1Q6BDS2 1440 aa15.37■□□□□ 0.05
COPS4-206ENST00000509093 ABCC3O15438 1527 aa15.37■□□□□ 0.05
COPS4-206ENST00000509093 CLTCL1P53675 1640 aa15.37■□□□□ 0.05
COPS4-206ENST00000509093 UGGT1Q9NYU2 1555 aa15.37■□□□□ 0.05
COPS4-206ENST00000509093 DNAJC5Q9H3Z4 198 aa15.37■□□□□ 0.05
COPS4-206ENST00000509093 SPATA31E1Q6ZUB1 1445 aa15.36■□□□□ 0.05
COPS4-206ENST00000509093 EIF4G2P78344 907 aaKnown RBP eCLIP15.36■□□□□ 0.05
COPS4-206ENST00000509093 NPATQ14207 1427 aa15.36■□□□□ 0.05
COPS4-206ENST00000509093 TRHP20396 242 aaPredicted RBP15.35■□□□□ 0.05
COPS4-206ENST00000509093 DEKP35659 375 aaKnown RBP15.35■□□□□ 0.05
COPS4-206ENST00000509093 SIGLEC1Q9BZZ2 1709 aa15.34■□□□□ 0.05
COPS4-206ENST00000509093 ERICH6BQ5W0A0 696 aa15.34■□□□□ 0.05
COPS4-206ENST00000509093 PRAG1Q86YV5 1406 aa15.32■□□□□ 0.04
COPS4-206ENST00000509093 RALGAPBQ86X10 1494 aa15.31■□□□□ 0.04
COPS4-206ENST00000509093 CFAP65Q6ZU64 1925 aaKnown RBP15.31■□□□□ 0.04
COPS4-206ENST00000509093 CAMSAP1Q5T5Y3 1602 aa15.31■□□□□ 0.04
COPS4-206ENST00000509093 C11orf95C9JLR9 678 aaPredicted RBP15.31■□□□□ 0.04
COPS4-206ENST00000509093 MLECQ14165 292 aa15.3■□□□□ 0.04
COPS4-206ENST00000509093 NBPF1Q3BBV0 1214 aa15.29■□□□□ 0.04
COPS4-206ENST00000509093 ARHGEF40Q8TER5 1519 aa15.29■□□□□ 0.04
COPS4-206ENST00000509093 REREQ9P2R6 1566 aa15.29■□□□□ 0.04
COPS4-206ENST00000509093 USP47Q96K76 1375 aa15.28■□□□□ 0.04
COPS4-206ENST00000509093 WASHC2AQ641Q2 1341 aa15.28■□□□□ 0.04
COPS4-206ENST00000509093 CARD11Q9BXL7 1154 aa15.28■□□□□ 0.04
COPS4-206ENST00000509093 AGLP35573 1532 aa15.28■□□□□ 0.04
COPS4-206ENST00000509093 ROCK2O75116 1388 aaKnown RBP15.26■□□□□ 0.03
COPS4-206ENST00000509093 NOS1P29475 1434 aa15.26■□□□□ 0.03
COPS4-206ENST00000509093 CHGAP10645 457 aaKnown RBP15.26■□□□□ 0.03
COPS4-206ENST00000509093 PPP4R2Q9NY27 417 aa15.26■□□□□ 0.03
COPS4-206ENST00000509093 TRPM1Q7Z4N2 1603 aa15.25■□□□□ 0.03
COPS4-206ENST00000509093 FBXO31Q5XUX0 539 aaPredicted RBP15.25■□□□□ 0.03
COPS4-206ENST00000509093 ARHGAP31Q2M1Z3 1444 aa15.25■□□□□ 0.03
COPS4-206ENST00000509093 CNTLNQ9NXG0 1405 aa15.25■□□□□ 0.03
Retrieved 100 of 20,778 RNA–protein pairs in 31.8 ms