RNA–Protein interactions for RNA: ENST00000509085.5

HMGCR-207, Transcript of 3-hydroxy-3-methylglutaryl-CoA reductase, humanhuman

TSL 1 (best)

Gene HMGCR, Length 637 nt, Biotype protein coding, Subcellular localisation Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HMGCR-207ENST00000509085 POLR1AO95602 1720 aaPredicted RBP14.1□□□□□ -0.15
HMGCR-207ENST00000509085 DNMT1P26358 1616 aaKnown RBP14.1□□□□□ -0.15
HMGCR-207ENST00000509085 CCDC141Q6ZP82 1450 aa14.1□□□□□ -0.15
HMGCR-207ENST00000509085 RSPH4AQ5TD94 716 aa14.09□□□□□ -0.15
HMGCR-207ENST00000509085 PZPP20742 1482 aa14.08□□□□□ -0.16
HMGCR-207ENST00000509085 ZNF644Q9H582 1327 aaPredicted RBP14.08□□□□□ -0.16
HMGCR-207ENST00000509085 CPS1P31327 1500 aa14.07□□□□□ -0.16
HMGCR-207ENST00000509085 UBAP1LF5GYI3 381 aa14.07□□□□□ -0.16
HMGCR-207ENST00000509085 CAMSAP2Q08AD1 1489 aa14.06□□□□□ -0.16
HMGCR-207ENST00000509085 TNRQ92752 1358 aa14.06□□□□□ -0.16
HMGCR-207ENST00000509085 ARHGEF5Q12774 1597 aa14.05□□□□□ -0.16
HMGCR-207ENST00000509085 NCOA2Q15596 1464 aa14.05□□□□□ -0.16
HMGCR-207ENST00000509085 NLRP1Q9C000 1473 aa14.05□□□□□ -0.16
HMGCR-207ENST00000509085 NEURL4Q96JN8 1562 aa14.04□□□□□ -0.16
HMGCR-207ENST00000509085 KIF3BO15066 747 aa14.03□□□□□ -0.16
HMGCR-207ENST00000509085 ZC3H13Q5T200 1668 aaKnown RBP14.02□□□□□ -0.16
HMGCR-207ENST00000509085 DEPDC5O75140 1603 aa14.02□□□□□ -0.16
HMGCR-207ENST00000509085 WASHC2CQ9Y4E1 1318 aa14.02□□□□□ -0.17
HMGCR-207ENST00000509085 SHANK2Q9UPX8 1470 aa14.01□□□□□ -0.17
HMGCR-207ENST00000509085 RNF17Q9BXT8 1623 aaKnown RBP14.01□□□□□ -0.17
HMGCR-207ENST00000509085 UGGT1Q9NYU2 1555 aa14□□□□□ -0.17
HMGCR-207ENST00000509085 MIA2Q96PC5 1412 aa14□□□□□ -0.17
HMGCR-207ENST00000509085 THEMISQ8N1K5 641 aaPredicted RBP14□□□□□ -0.17
HMGCR-207ENST00000509085 MED14O60244 1454 aa13.99□□□□□ -0.17
HMGCR-207ENST00000509085 TOM1O60784 492 aa13.99□□□□□ -0.17
HMGCR-207ENST00000509085 TSPY4P0CV99 314 aa13.99□□□□□ -0.17
HMGCR-207ENST00000509085 TSPY10P0CW01 314 aa13.99□□□□□ -0.17
HMGCR-207ENST00000509085 ANKLE2Q86XL3 938 aa13.99□□□□□ -0.17
HMGCR-207ENST00000509085 EIF2AK4Q9P2K8 1649 aaKnown RBP13.99□□□□□ -0.17
HMGCR-207ENST00000509085 MAST1Q9Y2H9 1570 aa13.99□□□□□ -0.17
HMGCR-207ENST00000509085 FBXO31Q5XUX0 539 aaPredicted RBP13.98□□□□□ -0.17
HMGCR-207ENST00000509085 VWDEQ8N2E2 1590 aa13.97□□□□□ -0.17
HMGCR-207ENST00000509085 IQGAP1P46940 1657 aa13.97□□□□□ -0.17
HMGCR-207ENST00000509085 NPHP4O75161 1426 aaPredicted RBP13.97□□□□□ -0.17
HMGCR-207ENST00000509085 DROSHAQ9NRR4 1374 aaKnown RBP eCLIP13.96□□□□□ -0.17
HMGCR-207ENST00000509085 ABCC3O15438 1527 aa13.95□□□□□ -0.18
HMGCR-207ENST00000509085 SYNMO15061 1565 aa13.95□□□□□ -0.18
HMGCR-207ENST00000509085 LRRC9Q6ZRR7 1453 aa13.94□□□□□ -0.18
HMGCR-207ENST00000509085 MED1Q15648 1581 aaPredicted RBP13.94□□□□□ -0.18
HMGCR-207ENST00000509085 SCAF1Q9H7N4 1312 aaKnown RBP13.93□□□□□ -0.18
HMGCR-207ENST00000509085 VPS8Q8N3P4 1428 aa13.93□□□□□ -0.18
HMGCR-207ENST00000509085 MAP3K1Q13233 1512 aa13.93□□□□□ -0.18
HMGCR-207ENST00000509085 HSPA1LP34931 641 aa13.92□□□□□ -0.18
HMGCR-207ENST00000509085 PIP4K2BP78356 416 aa13.92□□□□□ -0.18
HMGCR-207ENST00000509085 ERVK-7P63135 1459 aa13.92□□□□□ -0.18
HMGCR-207ENST00000509085 DUOX2Q9NRD8 1548 aa13.9□□□□□ -0.18
HMGCR-207ENST00000509085 MROH1Q8NDA8 1641 aa13.9□□□□□ -0.18
HMGCR-207ENST00000509085 CEP152O94986 1710 aa13.89□□□□□ -0.19
HMGCR-207ENST00000509085 UBR1Q8IWV7 1749 aa13.89□□□□□ -0.19
HMGCR-207ENST00000509085 MYOM3Q5VTT5 1437 aa13.89□□□□□ -0.19
HMGCR-207ENST00000509085 ALKQ9UM73 1620 aa13.88□□□□□ -0.19
HMGCR-207ENST00000509085 PRDM15P57071 1507 aaPredicted RBP13.88□□□□□ -0.19
HMGCR-207ENST00000509085 LRRC7Q96NW7 1537 aa13.87□□□□□ -0.19
HMGCR-207ENST00000509085 ARHGAP31Q2M1Z3 1444 aa13.87□□□□□ -0.19
HMGCR-207ENST00000509085 SCAF11Q99590 1463 aaKnown RBP13.87□□□□□ -0.19
HMGCR-207ENST00000509085 STRCP1A6NGW2 1772 aa13.86□□□□□ -0.19
HMGCR-207ENST00000509085 CROCC2H7BZ55 1655 aa13.86□□□□□ -0.19
HMGCR-207ENST00000509085 ERBINQ96RT1 1412 aa13.86□□□□□ -0.19
HMGCR-207ENST00000509085 SLIT1O75093 1534 aa13.85□□□□□ -0.19
HMGCR-207ENST00000509085 ARHGAP23Q9P227 1491 aa13.85□□□□□ -0.19
HMGCR-207ENST00000509085 KDM5AP29375 1690 aaKnown RBP13.83□□□□□ -0.2
HMGCR-207ENST00000509085 KIF15Q9NS87 1388 aa13.83□□□□□ -0.2
HMGCR-207ENST00000509085 CFAP65Q6ZU64 1925 aaKnown RBP13.82□□□□□ -0.2
HMGCR-207ENST00000509085 EID1Q9Y6B2 187 aa13.8□□□□□ -0.2
HMGCR-207ENST00000509085 KANK1Q14678 1352 aa13.8□□□□□ -0.2
HMGCR-207ENST00000509085 PTPN23Q9H3S7 1636 aa13.79□□□□□ -0.2
HMGCR-207ENST00000509085 KANK4Q5T7N3 995 aaPredicted RBP13.79□□□□□ -0.2
HMGCR-207ENST00000509085 PIK3C2BO00750 1634 aa13.79□□□□□ -0.2
HMGCR-207ENST00000509085 TXNDC2Q86VQ3 553 aa13.78□□□□□ -0.2
HMGCR-207ENST00000509085 ABCC5O15440 1437 aa13.78□□□□□ -0.2
HMGCR-207ENST00000509085 LMTK2Q8IWU2 1503 aa13.78□□□□□ -0.2
HMGCR-207ENST00000509085 DAPK1P53355 1430 aa13.77□□□□□ -0.21
HMGCR-207ENST00000509085 EFCAB6Q5THR3 1501 aa13.77□□□□□ -0.21
HMGCR-207ENST00000509085 XIRP1Q702N8 1843 aaKnown RBP13.77□□□□□ -0.21
HMGCR-207ENST00000509085 TMEM2Q9UHN6 1383 aa13.77□□□□□ -0.21
HMGCR-207ENST00000509085 LTKP29376 864 aa13.76□□□□□ -0.21
HMGCR-207ENST00000509085 ANKRD30AQ9BXX3 1397 aa13.75□□□□□ -0.21
HMGCR-207ENST00000509085 APLP2Q06481 763 aa13.74□□□□□ -0.21
HMGCR-207ENST00000509085 FOXD1Q16676 465 aa13.74□□□□□ -0.21
HMGCR-207ENST00000509085 RRP7BPQ9NSQ0 103 aa13.74□□□□□ -0.21
HMGCR-207ENST00000509085 STAG3Q9UJ98 1225 aa13.74□□□□□ -0.21
HMGCR-207ENST00000509085 FAM135BQ49AJ0 1406 aa13.73□□□□□ -0.21
HMGCR-207ENST00000509085 FGD6Q6ZV73 1430 aa13.73□□□□□ -0.21
HMGCR-207ENST00000509085 GRWD1Q9BQ67 446 aaKnown RBP eCLIP13.72□□□□□ -0.211e-8■■■■■ 27.7
HMGCR-207ENST00000509085 ADGRB3O60242 1522 aa13.72□□□□□ -0.21
HMGCR-207ENST00000509085 NKTRP30414 1462 aaKnown RBP13.72□□□□□ -0.21
HMGCR-207ENST00000509085 NOS1P29475 1434 aa13.71□□□□□ -0.22
HMGCR-207ENST00000509085 NWD1Q149M9 1564 aa13.71□□□□□ -0.22
HMGCR-207ENST00000509085 TET3O43151 1660 aa13.7□□□□□ -0.22
HMGCR-207ENST00000509085 RPRD2Q5VT52 1461 aaKnown RBP13.7□□□□□ -0.22
HMGCR-207ENST00000509085 LOC105371045A0A1W2PR82 267 aa13.7□□□□□ -0.22
HMGCR-207ENST00000509085 KCNA6P17658 529 aa13.7□□□□□ -0.22
HMGCR-207ENST00000509085 TMEM94Q12767 1356 aa13.7□□□□□ -0.22
HMGCR-207ENST00000509085 ADGRL2O95490 1459 aa13.69□□□□□ -0.22
HMGCR-207ENST00000509085 IDI1Q13907 227 aa13.68□□□□□ -0.22
HMGCR-207ENST00000509085 SLC52A1Q9NWF4 448 aa13.68□□□□□ -0.22
HMGCR-207ENST00000509085 ROBO1Q9Y6N7 1651 aa13.68□□□□□ -0.22
HMGCR-207ENST00000509085 PROSER2Q86WR7 435 aaPredicted RBP13.65□□□□□ -0.22
HMGCR-207ENST00000509085 MSH6P52701 1360 aa13.65□□□□□ -0.22
HMGCR-207ENST00000509085 SLC26A8Q96RN1 970 aa13.64□□□□□ -0.23
Retrieved 100 of 20,778 RNA–protein pairs in 38.9 ms