RNA–Protein interactions for RNA: ENST00000508918.5

LDB2-211, Transcript of LIM domain binding 2, humanhuman

TSL 5

Gene LDB2, Length 1,498 nt, Biotype nonsense mediated decay.

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LDB2-211ENST00000508918 GRWD1Q9BQ67 446 aaKnown RBP eCLIP19.63■□□□□ 0.73
LDB2-211ENST00000508918 DHX29Q7Z478 1369 aaKnown RBP19.63■□□□□ 0.73
LDB2-211ENST00000508918 TEX14Q8IWB6 1497 aa19.63■□□□□ 0.73
LDB2-211ENST00000508918 DEPDC5O75140 1603 aa19.63■□□□□ 0.73
LDB2-211ENST00000508918 RPRD2Q5VT52 1461 aaKnown RBP19.61■□□□□ 0.73
LDB2-211ENST00000508918 RAPGEF3O95398 923 aa19.61■□□□□ 0.73
LDB2-211ENST00000508918 ABCA6Q8N139 1617 aa19.61■□□□□ 0.73
LDB2-211ENST00000508918 PPP1R15AO75807 674 aaPredicted RBP19.6■□□□□ 0.73
LDB2-211ENST00000508918 FRMPD1Q5SYB0 1578 aa19.59■□□□□ 0.73
LDB2-211ENST00000508918 ZNF316A6NFI3 1004 aaPredicted RBP19.59■□□□□ 0.73
LDB2-211ENST00000508918 A2MP01023 1474 aa19.58■□□□□ 0.73
LDB2-211ENST00000508918 KIF3BO15066 747 aa19.55■□□□□ 0.72
LDB2-211ENST00000508918 DIP2CQ9Y2E4 1556 aa19.55■□□□□ 0.72
LDB2-211ENST00000508918 MROH1Q8NDA8 1641 aa19.55■□□□□ 0.72
LDB2-211ENST00000508918 ZMYM4Q5VZL5 1548 aa19.54■□□□□ 0.72
LDB2-211ENST00000508918 VWDEQ8N2E2 1590 aa19.54■□□□□ 0.72
LDB2-211ENST00000508918 PRDM15P57071 1507 aaPredicted RBP19.53■□□□□ 0.72
LDB2-211ENST00000508918 RNF17Q9BXT8 1623 aaKnown RBP19.53■□□□□ 0.72
LDB2-211ENST00000508918 BCORL1Q5H9F3 1711 aa19.53■□□□□ 0.72
LDB2-211ENST00000508918 KANK1Q14678 1352 aa19.52■□□□□ 0.71
LDB2-211ENST00000508918 TET3O43151 1660 aa19.51■□□□□ 0.71
LDB2-211ENST00000508918 E9PCH4 1651 aa19.5■□□□□ 0.71
LDB2-211ENST00000508918 L3MBTL2Q969R5 705 aa19.5■□□□□ 0.71
LDB2-211ENST00000508918 YEATS2Q9ULM3 1422 aa19.49■□□□□ 0.71
LDB2-211ENST00000508918 AEBP2Q6ZN18 517 aaPredicted RBP19.48■□□□□ 0.71
LDB2-211ENST00000508918 PLA2R1Q13018 1463 aa19.47■□□□□ 0.71
LDB2-211ENST00000508918 ATP10AO60312 1499 aa19.46■□□□□ 0.71
LDB2-211ENST00000508918 CEP152O94986 1710 aa19.45■□□□□ 0.7
LDB2-211ENST00000508918 CCDC144AA2RUR9 1427 aa19.44■□□□□ 0.7
LDB2-211ENST00000508918 DNAJC5Q9H3Z4 198 aa19.43■□□□□ 0.7
LDB2-211ENST00000508918 SPHKAPQ2M3C7 1700 aa19.43■□□□□ 0.7
LDB2-211ENST00000508918 COL17A1Q9UMD9 1497 aaPredicted RBP19.43■□□□□ 0.7
LDB2-211ENST00000508918 LMTK2Q8IWU2 1503 aa19.43■□□□□ 0.7
LDB2-211ENST00000508918 EFCAB6Q5THR3 1501 aa19.41■□□□□ 0.7
LDB2-211ENST00000508918 GGT6Q6P531 493 aa19.4■□□□□ 0.7
LDB2-211ENST00000508918 TRPM2O94759 1503 aa19.39■□□□□ 0.69
LDB2-211ENST00000508918 REREQ9P2R6 1566 aa19.38■□□□□ 0.69
LDB2-211ENST00000508918 PTPRTO14522 1441 aa19.38■□□□□ 0.69
LDB2-211ENST00000508918 ABCC3O15438 1527 aa19.37■□□□□ 0.69
LDB2-211ENST00000508918 NBPF8Q3BBV2 869 aa19.36■□□□□ 0.69
LDB2-211ENST00000508918 DIEXFQ68CQ4 756 aaKnown RBP19.36■□□□□ 0.69
LDB2-211ENST00000508918 ARHGEF40Q8TER5 1519 aa19.36■□□□□ 0.69
LDB2-211ENST00000508918 CLTCL1P53675 1640 aa19.35■□□□□ 0.69
LDB2-211ENST00000508918 ZC3H13Q5T200 1668 aaKnown RBP19.34■□□□□ 0.69
LDB2-211ENST00000508918 CAMSAP1Q5T5Y3 1602 aa19.34■□□□□ 0.69
LDB2-211ENST00000508918 WASHC2CQ9Y4E1 1318 aa19.33■□□□□ 0.69
LDB2-211ENST00000508918 TRHP20396 242 aaPredicted RBP19.33■□□□□ 0.68
LDB2-211ENST00000508918 AGLP35573 1532 aa19.33■□□□□ 0.68
LDB2-211ENST00000508918 UHRF1BP1Q6BDS2 1440 aa19.31■□□□□ 0.68
LDB2-211ENST00000508918 SIGLEC1Q9BZZ2 1709 aa19.31■□□□□ 0.68
LDB2-211ENST00000508918 DCAF11Q8TEB1 546 aa19.29■□□□□ 0.68
LDB2-211ENST00000508918 NPATQ14207 1427 aa19.29■□□□□ 0.68
LDB2-211ENST00000508918 RGL3Q3MIN7 710 aa19.28■□□□□ 0.68
LDB2-211ENST00000508918 ZNF326Q5BKZ1 582 aaKnown RBP19.28■□□□□ 0.68
LDB2-211ENST00000508918 CFAP65Q6ZU64 1925 aaKnown RBP19.28■□□□□ 0.68
LDB2-211ENST00000508918 SPATA31E1Q6ZUB1 1445 aa19.28■□□□□ 0.68
LDB2-211ENST00000508918 KDM2AQ9Y2K7 1162 aa19.28■□□□□ 0.68
LDB2-211ENST00000508918 HIRIP3Q9BW71 556 aaPredicted RBP19.27■□□□□ 0.67
LDB2-211ENST00000508918 UGGT1Q9NYU2 1555 aa19.26■□□□□ 0.67
LDB2-211ENST00000508918 KIF1BO60333 1816 aa19.26■□□□□ 0.67
LDB2-211ENST00000508918 RALGAPBQ86X10 1494 aa19.25■□□□□ 0.67
LDB2-211ENST00000508918 NEURL4Q96JN8 1562 aa19.24■□□□□ 0.67
LDB2-211ENST00000508918 ARHGAP31Q2M1Z3 1444 aa19.24■□□□□ 0.67
LDB2-211ENST00000508918 CNTLNQ9NXG0 1405 aa19.23■□□□□ 0.67
LDB2-211ENST00000508918 HSPA5P11021 654 aaKnown RBP19.23■□□□□ 0.67
LDB2-211ENST00000508918 EIF4G2P78344 907 aaKnown RBP eCLIP19.23■□□□□ 0.67
LDB2-211ENST00000508918 PRAG1Q86YV5 1406 aa19.23■□□□□ 0.67
LDB2-211ENST00000508918 TRPM1Q7Z4N2 1603 aa19.21■□□□□ 0.67
LDB2-211ENST00000508918 PPP6R1Q9UPN7 881 aa19.21■□□□□ 0.67
LDB2-211ENST00000508918 NOS1P29475 1434 aa19.2■□□□□ 0.66
LDB2-211ENST00000508918 MROH2AA6NES4 1674 aa19.2■□□□□ 0.66
LDB2-211ENST00000508918 CLTCQ00610 1675 aaKnown RBP19.2■□□□□ 0.66
LDB2-211ENST00000508918 SYNMO15061 1565 aa19.19■□□□□ 0.66
LDB2-211ENST00000508918 PREX1Q8TCU6 1659 aa19.19■□□□□ 0.66
LDB2-211ENST00000508918 PIK3C2BO00750 1634 aa19.17■□□□□ 0.66
LDB2-211ENST00000508918 ADGRB3O60242 1522 aa19.17■□□□□ 0.66
LDB2-211ENST00000508918 MLECQ14165 292 aa19.16■□□□□ 0.66
LDB2-211ENST00000508918 MADDQ8WXG6 1647 aa19.16■□□□□ 0.66
LDB2-211ENST00000508918 IFT172Q9UG01 1749 aa19.15■□□□□ 0.66
LDB2-211ENST00000508918 ROCK2O75116 1388 aaKnown RBP19.13■□□□□ 0.65
LDB2-211ENST00000508918 USP47Q96K76 1375 aa19.13■□□□□ 0.65
LDB2-211ENST00000508918 STAC3Q96MF2 364 aa19.13■□□□□ 0.65
LDB2-211ENST00000508918 CARD11Q9BXL7 1154 aa19.13■□□□□ 0.65
LDB2-211ENST00000508918 ARID4BQ4LE39 1312 aaPredicted RBP19.11■□□□□ 0.65
LDB2-211ENST00000508918 LAMC1P11047 1609 aa19.11■□□□□ 0.65
LDB2-211ENST00000508918 CHGAP10645 457 aaKnown RBP19.11■□□□□ 0.65
LDB2-211ENST00000508918 MYOM2P54296 1465 aa19.11■□□□□ 0.65
LDB2-211ENST00000508918 ERVK-7P63135 1459 aa19.11■□□□□ 0.65
LDB2-211ENST00000508918 POLR1AO95602 1720 aaPredicted RBP19.1■□□□□ 0.65
LDB2-211ENST00000508918 DDX10Q13206 875 aaKnown RBP19.09■□□□□ 0.65
LDB2-211ENST00000508918 PPLO60437 1756 aa19.09■□□□□ 0.65
LDB2-211ENST00000508918 GPRASP1Q5JY77 1395 aa19.09■□□□□ 0.65
LDB2-211ENST00000508918 NBPF1Q3BBV0 1214 aa19.09■□□□□ 0.65
LDB2-211ENST00000508918 FBXO31Q5XUX0 539 aaPredicted RBP19.08■□□□□ 0.64
LDB2-211ENST00000508918 MIER1Q8N108 512 aa19.08■□□□□ 0.64
LDB2-211ENST00000508918 ESF1Q9H501 851 aaKnown RBP19.07■□□□□ 0.64
LDB2-211ENST00000508918 SLC52A1Q9NWF4 448 aa19.07■□□□□ 0.64
LDB2-211ENST00000508918 KIAA1210Q9ULL0 1709 aa19.07■□□□□ 0.64
LDB2-211ENST00000508918 WASHC2AQ641Q2 1341 aa19.06■□□□□ 0.64
LDB2-211ENST00000508918 SPATA31D1Q6ZQQ2 1576 aa19.06■□□□□ 0.64
Retrieved 100 of 20,778 RNA–protein pairs in 25.8 ms