RNA–Protein interactions for RNA: ENST00000508854.1

SH3D21-206, Transcript of SH3 domain containing 21, humanhuman

TSL 5

Gene SH3D21, Length 1,134 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SH3D21-206ENST00000508854 KIF3BO15066 747 aa16.01■□□□□ 0.15
SH3D21-206ENST00000508854 CCDC141Q6ZP82 1450 aa15.99■□□□□ 0.15
SH3D21-206ENST00000508854 TNRQ92752 1358 aa15.99■□□□□ 0.15
SH3D21-206ENST00000508854 WASHC2CQ9Y4E1 1318 aa15.98■□□□□ 0.15
SH3D21-206ENST00000508854 TSPY4P0CV99 314 aa15.98■□□□□ 0.15
SH3D21-206ENST00000508854 TSPY10P0CW01 314 aa15.98■□□□□ 0.15
SH3D21-206ENST00000508854 DNMT1P26358 1616 aaKnown RBP15.97■□□□□ 0.15
SH3D21-206ENST00000508854 THEMISQ8N1K5 641 aaPredicted RBP15.97■□□□□ 0.15
SH3D21-206ENST00000508854 KDM5DQ9BY66 1539 aa15.97■□□□□ 0.15
SH3D21-206ENST00000508854 ANKLE2Q86XL3 938 aa15.96■□□□□ 0.15
SH3D21-206ENST00000508854 PZPP20742 1482 aa15.96■□□□□ 0.14
SH3D21-206ENST00000508854 TOM1O60784 492 aa15.95■□□□□ 0.14
SH3D21-206ENST00000508854 CAMSAP2Q08AD1 1489 aa15.95■□□□□ 0.14
SH3D21-206ENST00000508854 NCOA2Q15596 1464 aa15.95■□□□□ 0.14
SH3D21-206ENST00000508854 CPS1P31327 1500 aa15.94■□□□□ 0.14
SH3D21-206ENST00000508854 FBXO31Q5XUX0 539 aaPredicted RBP15.94■□□□□ 0.14
SH3D21-206ENST00000508854 POLR1AO95602 1720 aaPredicted RBP15.93■□□□□ 0.14
SH3D21-206ENST00000508854 NLRP1Q9C000 1473 aa15.92■□□□□ 0.14
SH3D21-206ENST00000508854 MIA2Q96PC5 1412 aa15.92■□□□□ 0.14
SH3D21-206ENST00000508854 ARHGEF5Q12774 1597 aa15.91■□□□□ 0.14
SH3D21-206ENST00000508854 SHANK2Q9UPX8 1470 aa15.91■□□□□ 0.14
SH3D21-206ENST00000508854 SCAF1Q9H7N4 1312 aaKnown RBP15.9■□□□□ 0.14
SH3D21-206ENST00000508854 DROSHAQ9NRR4 1374 aaKnown RBP eCLIP15.88■□□□□ 0.13
SH3D21-206ENST00000508854 UGGT1Q9NYU2 1555 aa15.88■□□□□ 0.13
SH3D21-206ENST00000508854 PIP4K2BP78356 416 aa15.87■□□□□ 0.13
SH3D21-206ENST00000508854 NEURL4Q96JN8 1562 aa15.87■□□□□ 0.13
SH3D21-206ENST00000508854 DEPDC5O75140 1603 aa15.86■□□□□ 0.13
SH3D21-206ENST00000508854 MED14O60244 1454 aa15.86■□□□□ 0.13
SH3D21-206ENST00000508854 NPHP4O75161 1426 aaPredicted RBP15.85■□□□□ 0.13
SH3D21-206ENST00000508854 ZC3H13Q5T200 1668 aaKnown RBP15.84■□□□□ 0.13
SH3D21-206ENST00000508854 HSPA1LP34931 641 aa15.84■□□□□ 0.13
SH3D21-206ENST00000508854 LRRC9Q6ZRR7 1453 aa15.84■□□□□ 0.13
SH3D21-206ENST00000508854 MAST1Q9Y2H9 1570 aa15.83■□□□□ 0.13
SH3D21-206ENST00000508854 RNF17Q9BXT8 1623 aaKnown RBP15.83■□□□□ 0.12
SH3D21-206ENST00000508854 VPS8Q8N3P4 1428 aa15.82■□□□□ 0.12
SH3D21-206ENST00000508854 EIF2AK4Q9P2K8 1649 aaKnown RBP15.82■□□□□ 0.12
SH3D21-206ENST00000508854 VWDEQ8N2E2 1590 aa15.81■□□□□ 0.12
SH3D21-206ENST00000508854 ABCC3O15438 1527 aa15.8■□□□□ 0.12
SH3D21-206ENST00000508854 MAP3K1Q13233 1512 aa15.8■□□□□ 0.12
SH3D21-206ENST00000508854 IQGAP1P46940 1657 aa15.79■□□□□ 0.12
SH3D21-206ENST00000508854 MYOM3Q5VTT5 1437 aa15.79■□□□□ 0.12
SH3D21-206ENST00000508854 DUOX2Q9NRD8 1548 aa15.78■□□□□ 0.12
SH3D21-206ENST00000508854 ERVK-7P63135 1459 aa15.78■□□□□ 0.12
SH3D21-206ENST00000508854 MED1Q15648 1581 aaPredicted RBP15.76■□□□□ 0.11
SH3D21-206ENST00000508854 PHF23Q9BUL5 403 aaPredicted RBP15.76■□□□□ 0.11
SH3D21-206ENST00000508854 EID1Q9Y6B2 187 aa15.75■□□□□ 0.11
SH3D21-206ENST00000508854 SYNMO15061 1565 aa15.74■□□□□ 0.11
SH3D21-206ENST00000508854 LRRC7Q96NW7 1537 aa15.73■□□□□ 0.11
SH3D21-206ENST00000508854 SCAF11Q99590 1463 aaKnown RBP15.73■□□□□ 0.11
SH3D21-206ENST00000508854 APLP2Q06481 763 aa15.73■□□□□ 0.11
SH3D21-206ENST00000508854 KANK4Q5T7N3 995 aaPredicted RBP15.73■□□□□ 0.11
SH3D21-206ENST00000508854 TXNDC2Q86VQ3 553 aa15.73■□□□□ 0.11
SH3D21-206ENST00000508854 ARHGAP31Q2M1Z3 1444 aa15.73■□□□□ 0.11
SH3D21-206ENST00000508854 ERBINQ96RT1 1412 aa15.72■□□□□ 0.11
SH3D21-206ENST00000508854 KANK1Q14678 1352 aa15.72■□□□□ 0.11
SH3D21-206ENST00000508854 KIF15Q9NS87 1388 aa15.72■□□□□ 0.11
SH3D21-206ENST00000508854 MROH1Q8NDA8 1641 aa15.72■□□□□ 0.11
SH3D21-206ENST00000508854 CEP152O94986 1710 aa15.71■□□□□ 0.11
SH3D21-206ENST00000508854 UBR1Q8IWV7 1749 aa15.71■□□□□ 0.11
SH3D21-206ENST00000508854 CFAP65Q6ZU64 1925 aaKnown RBP15.71■□□□□ 0.11
SH3D21-206ENST00000508854 STAG3Q9UJ98 1225 aa15.7■□□□□ 0.1
SH3D21-206ENST00000508854 SLIT1O75093 1534 aa15.69■□□□□ 0.1
SH3D21-206ENST00000508854 LOC105371045A0A1W2PR82 267 aa15.69■□□□□ 0.1
SH3D21-206ENST00000508854 RRP7BPQ9NSQ0 103 aa15.69■□□□□ 0.1
SH3D21-206ENST00000508854 PRDM15P57071 1507 aaPredicted RBP15.68■□□□□ 0.1
SH3D21-206ENST00000508854 STRCP1A6NGW2 1772 aa15.68■□□□□ 0.1
SH3D21-206ENST00000508854 ARHGAP23Q9P227 1491 aa15.68■□□□□ 0.1
SH3D21-206ENST00000508854 GRWD1Q9BQ67 446 aaKnown RBP eCLIP15.68■□□□□ 0.12e-6■■■□□ 14.7
SH3D21-206ENST00000508854 ALKQ9UM73 1620 aa15.68■□□□□ 0.1
SH3D21-206ENST00000508854 LTKP29376 864 aa15.67■□□□□ 0.1
SH3D21-206ENST00000508854 ABCC5O15440 1437 aa15.67■□□□□ 0.1
SH3D21-206ENST00000508854 PTPN23Q9H3S7 1636 aa15.65■□□□□ 0.1
SH3D21-206ENST00000508854 ANKRD30AQ9BXX3 1397 aa15.64■□□□□ 0.09
SH3D21-206ENST00000508854 TMEM2Q9UHN6 1383 aa15.64■□□□□ 0.09
SH3D21-206ENST00000508854 CROCC2H7BZ55 1655 aa15.64■□□□□ 0.09
SH3D21-206ENST00000508854 KDM5AP29375 1690 aaKnown RBP15.63■□□□□ 0.09
SH3D21-206ENST00000508854 DAPK1P53355 1430 aa15.63■□□□□ 0.09
SH3D21-206ENST00000508854 SENP3Q9H4L4 574 aaPredicted RBP15.63■□□□□ 0.09
SH3D21-206ENST00000508854 KCNA6P17658 529 aa15.61■□□□□ 0.09
SH3D21-206ENST00000508854 EFCAB6Q5THR3 1501 aa15.61■□□□□ 0.09
SH3D21-206ENST00000508854 LMTK2Q8IWU2 1503 aa15.61■□□□□ 0.09
SH3D21-206ENST00000508854 PIK3C2BO00750 1634 aa15.61■□□□□ 0.09
SH3D21-206ENST00000508854 IDI1Q13907 227 aa15.6■□□□□ 0.09
SH3D21-206ENST00000508854 SLC52A1Q9NWF4 448 aa15.6■□□□□ 0.09
SH3D21-206ENST00000508854 FAM135BQ49AJ0 1406 aa15.6■□□□□ 0.09
SH3D21-206ENST00000508854 FGD6Q6ZV73 1430 aa15.6■□□□□ 0.09
SH3D21-206ENST00000508854 HDGFP51858 240 aaKnown RBP15.59■□□□□ 0.09
SH3D21-206ENST00000508854 CHIC2Q9UKJ5 165 aa15.58■□□□□ 0.08
SH3D21-206ENST00000508854 PROSER2Q86WR7 435 aaPredicted RBP15.57■□□□□ 0.08
SH3D21-206ENST00000508854 TMEM94Q12767 1356 aa15.57■□□□□ 0.08
SH3D21-206ENST00000508854 BCANQ96GW7 911 aa15.56■□□□□ 0.08
SH3D21-206ENST00000508854 XIRP1Q702N8 1843 aaKnown RBP15.56■□□□□ 0.08
SH3D21-206ENST00000508854 NOS1P29475 1434 aa15.55■□□□□ 0.08
SH3D21-206ENST00000508854 SLC26A8Q96RN1 970 aa15.55■□□□□ 0.08
SH3D21-206ENST00000508854 TET3O43151 1660 aa15.54■□□□□ 0.08
SH3D21-206ENST00000508854 RPRD2Q5VT52 1461 aaKnown RBP15.53■□□□□ 0.08
SH3D21-206ENST00000508854 ADGRB3O60242 1522 aa15.53■□□□□ 0.08
SH3D21-206ENST00000508854 NKTRP30414 1462 aaKnown RBP15.52■□□□□ 0.08
SH3D21-206ENST00000508854 MSH6P52701 1360 aa15.52■□□□□ 0.08
SH3D21-206ENST00000508854 ADGRL2O95490 1459 aa15.52■□□□□ 0.07
Retrieved 100 of 20,778 RNA–protein pairs in 30.7 ms