RNA–Protein interactions for RNA: ENST00000508848.5

POLR2J3-213, Transcript of RNA polymerase II subunit J3, humanhuman

TSL 5

Gene POLR2J3, Length 1,030 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
POLR2J3-213ENST00000508848 ERBINQ96RT1 1412 aa16.22■□□□□ 0.19
POLR2J3-213ENST00000508848 KIF3BO15066 747 aa16.22■□□□□ 0.19
POLR2J3-213ENST00000508848 FAM50AQ14320 339 aaKnown RBP16.22■□□□□ 0.19
POLR2J3-213ENST00000508848 KIF15Q9NS87 1388 aa16.22■□□□□ 0.19
POLR2J3-213ENST00000508848 RNF17Q9BXT8 1623 aaKnown RBP16.21■□□□□ 0.19
POLR2J3-213ENST00000508848 GGT6Q6P531 493 aa16.2■□□□□ 0.18
POLR2J3-213ENST00000508848 ZMYM3Q14202 1370 aa16.2■□□□□ 0.18
POLR2J3-213ENST00000508848 NPATQ14207 1427 aa16.19■□□□□ 0.18
POLR2J3-213ENST00000508848 C3P01024 1663 aa16.19■□□□□ 0.18
POLR2J3-213ENST00000508848 RRP7BPQ9NSQ0 103 aa16.18■□□□□ 0.18
POLR2J3-213ENST00000508848 KDM5DQ9BY66 1539 aa16.18■□□□□ 0.18
POLR2J3-213ENST00000508848 PPARGC1BQ86YN6 1023 aaKnown RBP16.16■□□□□ 0.18
POLR2J3-213ENST00000508848 PTPRKQ15262 1439 aa16.16■□□□□ 0.18
POLR2J3-213ENST00000508848 DEPDC5O75140 1603 aa16.16■□□□□ 0.18
POLR2J3-213ENST00000508848 ZC3H13Q5T200 1668 aaKnown RBP16.15■□□□□ 0.18
POLR2J3-213ENST00000508848 WASHC2CQ9Y4E1 1318 aa16.15■□□□□ 0.18
POLR2J3-213ENST00000508848 CLTCQ00610 1675 aaKnown RBP16.14■□□□□ 0.18
POLR2J3-213ENST00000508848 CHIC2Q9UKJ5 165 aa16.14■□□□□ 0.17
POLR2J3-213ENST00000508848 MROH1Q8NDA8 1641 aa16.13■□□□□ 0.17
POLR2J3-213ENST00000508848 PRDM15P57071 1507 aaPredicted RBP16.13■□□□□ 0.17
POLR2J3-213ENST00000508848 ANKRD50Q9ULJ7 1429 aa16.12■□□□□ 0.17
POLR2J3-213ENST00000508848 PREX1Q8TCU6 1659 aa16.12■□□□□ 0.17
POLR2J3-213ENST00000508848 CEBPAP49715 358 aaPredicted RBP16.11■□□□□ 0.17
POLR2J3-213ENST00000508848 ARHGAP31Q2M1Z3 1444 aa16.11■□□□□ 0.17
POLR2J3-213ENST00000508848 VWDEQ8N2E2 1590 aa16.1■□□□□ 0.17
POLR2J3-213ENST00000508848 PZPP20742 1482 aa16.1■□□□□ 0.17
POLR2J3-213ENST00000508848 LMTK3Q96Q04 1460 aa16.1■□□□□ 0.17
POLR2J3-213ENST00000508848 LMTK2Q8IWU2 1503 aa16.09■□□□□ 0.17
POLR2J3-213ENST00000508848 KANK1Q14678 1352 aa16.09■□□□□ 0.17
POLR2J3-213ENST00000508848 ABCC3O15438 1527 aa16.09■□□□□ 0.17
POLR2J3-213ENST00000508848 ACIN1Q9UKV3 1341 aaKnown RBP16.07■□□□□ 0.16
POLR2J3-213ENST00000508848 UHRF1BP1Q6BDS2 1440 aa16.07■□□□□ 0.16
POLR2J3-213ENST00000508848 CAMSAP1Q5T5Y3 1602 aa16.03■□□□□ 0.16
POLR2J3-213ENST00000508848 UNC13BO14795 1591 aa16.03■□□□□ 0.16
POLR2J3-213ENST00000508848 CEP152O94986 1710 aa16.02■□□□□ 0.16
POLR2J3-213ENST00000508848 SPATA31D1Q6ZQQ2 1576 aa16.02■□□□□ 0.16
POLR2J3-213ENST00000508848 RPRD2Q5VT52 1461 aaKnown RBP16.02■□□□□ 0.15
POLR2J3-213ENST00000508848 HFM1A2PYH4 1435 aa16.02■□□□□ 0.15
POLR2J3-213ENST00000508848 NAIPQ13075 1403 aa16.02■□□□□ 0.15
POLR2J3-213ENST00000508848 ZNF142P52746 1687 aaPredicted RBP16.02■□□□□ 0.15
POLR2J3-213ENST00000508848 NLRP1Q9C000 1473 aa16.01■□□□□ 0.15
POLR2J3-213ENST00000508848 ITGAEP38570 1179 aa16■□□□□ 0.15
POLR2J3-213ENST00000508848 CFAP65Q6ZU64 1925 aaKnown RBP16■□□□□ 0.15
POLR2J3-213ENST00000508848 TNRQ92752 1358 aa16■□□□□ 0.15
POLR2J3-213ENST00000508848 GCC2Q8IWJ2 1684 aa15.99■□□□□ 0.15
POLR2J3-213ENST00000508848 FBXO31Q5XUX0 539 aaPredicted RBP15.99■□□□□ 0.15
POLR2J3-213ENST00000508848 GRWD1Q9BQ67 446 aaKnown RBP eCLIP15.99■□□□□ 0.15
POLR2J3-213ENST00000508848 A2ML1A8K2U0 1454 aa15.98■□□□□ 0.15
POLR2J3-213ENST00000508848 DMRT2Q9Y5R5 561 aa15.98■□□□□ 0.15
POLR2J3-213ENST00000508848 TET3O43151 1660 aa15.98■□□□□ 0.15
POLR2J3-213ENST00000508848 IQGAP3Q86VI3 1631 aa15.97■□□□□ 0.15
POLR2J3-213ENST00000508848 MYO3AQ8NEV4 1616 aa15.97■□□□□ 0.15
POLR2J3-213ENST00000508848 ERVK-7P63135 1459 aa15.97■□□□□ 0.15
POLR2J3-213ENST00000508848 PLPPR3Q6T4P5 718 aa15.97■□□□□ 0.15
POLR2J3-213ENST00000508848 EFCAB6Q5THR3 1501 aa15.97■□□□□ 0.15
POLR2J3-213ENST00000508848 PLA2R1Q13018 1463 aa15.96■□□□□ 0.14
POLR2J3-213ENST00000508848 CEP170BQ9Y4F5 1589 aaPredicted RBP15.96■□□□□ 0.14
POLR2J3-213ENST00000508848 NOS1P29475 1434 aa15.95■□□□□ 0.14
POLR2J3-213ENST00000508848 THEMISQ8N1K5 641 aaPredicted RBP15.95■□□□□ 0.14
POLR2J3-213ENST00000508848 KDM5AP29375 1690 aaKnown RBP15.95■□□□□ 0.14
POLR2J3-213ENST00000508848 SLC52A1Q9NWF4 448 aa15.94■□□□□ 0.14
POLR2J3-213ENST00000508848 NUP155O75694 1391 aa15.94■□□□□ 0.14
POLR2J3-213ENST00000508848 STRCQ7RTU9 1775 aa15.94■□□□□ 0.14
POLR2J3-213ENST00000508848 HRCP23327 699 aa15.93■□□□□ 0.14
POLR2J3-213ENST00000508848 PKD2Q13563 968 aa15.93■□□□□ 0.14
POLR2J3-213ENST00000508848 HSPA2P54652 639 aa15.92■□□□□ 0.14
POLR2J3-213ENST00000508848 PTPRTO14522 1441 aa15.91■□□□□ 0.14
POLR2J3-213ENST00000508848 UGGT1Q9NYU2 1555 aa15.89■□□□□ 0.13
POLR2J3-213ENST00000508848 E9PCH4 1651 aa15.89■□□□□ 0.13
POLR2J3-213ENST00000508848 IDI1Q13907 227 aa15.87■□□□□ 0.13
POLR2J3-213ENST00000508848 SETD5Q9C0A6 1442 aa15.86■□□□□ 0.13
POLR2J3-213ENST00000508848 UBR1Q8IWV7 1749 aa15.86■□□□□ 0.13
POLR2J3-213ENST00000508848 SYNMO15061 1565 aa15.86■□□□□ 0.13
POLR2J3-213ENST00000508848 ANKLE2Q86XL3 938 aa15.85■□□□□ 0.13
POLR2J3-213ENST00000508848 PIK3C2BO00750 1634 aa15.85■□□□□ 0.13
POLR2J3-213ENST00000508848 MED14O60244 1454 aa15.84■□□□□ 0.13
POLR2J3-213ENST00000508848 SLIT1O75093 1534 aa15.84■□□□□ 0.13
POLR2J3-213ENST00000508848 ARHGAP23Q9P227 1491 aa15.84■□□□□ 0.13
POLR2J3-213ENST00000508848 POLR1AO95602 1720 aaPredicted RBP15.82■□□□□ 0.12
POLR2J3-213ENST00000508848 PIAS4Q8N2W9 510 aaPredicted RBP15.81■□□□□ 0.12
POLR2J3-213ENST00000508848 SPHKAPQ2M3C7 1700 aa15.8■□□□□ 0.12
POLR2J3-213ENST00000508848 HDGFP51858 240 aaKnown RBP15.8■□□□□ 0.12
POLR2J3-213ENST00000508848 TRIM52Q96A61 297 aa15.8■□□□□ 0.12
POLR2J3-213ENST00000508848 TMEM2Q9UHN6 1383 aa15.79■□□□□ 0.12
POLR2J3-213ENST00000508848 SLC4A1APQ9BWU0 796 aaKnown RBP15.79■□□□□ 0.12
POLR2J3-213ENST00000508848 TMEM131LA2VDJ0 1609 aa15.79■□□□□ 0.12
POLR2J3-213ENST00000508848 NCKAP5LQ9HCH0 1330 aa15.78■□□□□ 0.12
POLR2J3-213ENST00000508848 ADGRB3O60242 1522 aa15.78■□□□□ 0.12
POLR2J3-213ENST00000508848 MPHOSPH9Q99550 1183 aa15.77■□□□□ 0.12
POLR2J3-213ENST00000508848 STAG3Q9UJ98 1225 aa15.77■□□□□ 0.12
POLR2J3-213ENST00000508848 EID1Q9Y6B2 187 aa15.77■□□□□ 0.12
POLR2J3-213ENST00000508848 TRPM2O94759 1503 aa15.76■□□□□ 0.11
POLR2J3-213ENST00000508848 RAB3GAP2Q9H2M9 1393 aa15.75■□□□□ 0.11
POLR2J3-213ENST00000508848 NEURL4Q96JN8 1562 aa15.75■□□□□ 0.11
POLR2J3-213ENST00000508848 SCAF11Q99590 1463 aaKnown RBP15.75■□□□□ 0.11
POLR2J3-213ENST00000508848 TXNDC2Q86VQ3 553 aa15.74■□□□□ 0.11
POLR2J3-213ENST00000508848 ABCF1Q8NE71 845 aaKnown RBP eCLIP15.74■□□□□ 0.11
POLR2J3-213ENST00000508848 MYO5BQ9ULV0 1848 aa15.73■□□□□ 0.11
POLR2J3-213ENST00000508848 LTKP29376 864 aa15.73■□□□□ 0.11
POLR2J3-213ENST00000508848 NPHP4O75161 1426 aaPredicted RBP15.73■□□□□ 0.11
Retrieved 100 of 20,778 RNA–protein pairs in 28.9 ms