RNA–Protein interactions for RNA: ENST00000508818.5

UBE2D3-227, Transcript of ubiquitin conjugating enzyme E2 D3, humanhuman

TSL 2

Gene UBE2D3, Length 584 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
UBE2D3-227ENST00000508818 MYOM3Q5VTT5 1437 aa15.75■□□□□ 0.11
UBE2D3-227ENST00000508818 MIA2Q96PC5 1412 aa15.75■□□□□ 0.11
UBE2D3-227ENST00000508818 STRCQ7RTU9 1775 aa15.73■□□□□ 0.11
UBE2D3-227ENST00000508818 PTPRTO14522 1441 aa15.73■□□□□ 0.11
UBE2D3-227ENST00000508818 PTPRKQ15262 1439 aa15.73■□□□□ 0.11
UBE2D3-227ENST00000508818 NCKAP5LQ9HCH0 1330 aa15.7■□□□□ 0.1
UBE2D3-227ENST00000508818 NCOA1Q15788 1441 aa15.7■□□□□ 0.1
UBE2D3-227ENST00000508818 FBXO31Q5XUX0 539 aaPredicted RBP15.7■□□□□ 0.1
UBE2D3-227ENST00000508818 CAMSAP1Q5T5Y3 1602 aa15.69■□□□□ 0.1
UBE2D3-227ENST00000508818 PKD2Q13563 968 aa15.69■□□□□ 0.1
UBE2D3-227ENST00000508818 TNRQ92752 1358 aa15.68■□□□□ 0.1
UBE2D3-227ENST00000508818 KDM5DQ9BY66 1539 aa15.67■□□□□ 0.1
UBE2D3-227ENST00000508818 MYO3AQ8NEV4 1616 aa15.66■□□□□ 0.1
UBE2D3-227ENST00000508818 FAM135AQ9P2D6 1515 aa15.66■□□□□ 0.1
UBE2D3-227ENST00000508818 MAST1Q9Y2H9 1570 aa15.66■□□□□ 0.1
UBE2D3-227ENST00000508818 CEP170BQ9Y4F5 1589 aaPredicted RBP15.66■□□□□ 0.1
UBE2D3-227ENST00000508818 RRP7BPQ9NSQ0 103 aa15.65■□□□□ 0.1
UBE2D3-227ENST00000508818 A2ML1A8K2U0 1454 aa15.64■□□□□ 0.09
UBE2D3-227ENST00000508818 PZPP20742 1482 aa15.64■□□□□ 0.09
UBE2D3-227ENST00000508818 THEMISQ8N1K5 641 aaPredicted RBP15.63■□□□□ 0.09
UBE2D3-227ENST00000508818 PLA2R1Q13018 1463 aa15.63■□□□□ 0.09
UBE2D3-227ENST00000508818 PTPN23Q9H3S7 1636 aa15.62■□□□□ 0.09
UBE2D3-227ENST00000508818 GRWD1Q9BQ67 446 aaKnown RBP eCLIP15.62■□□□□ 0.09
UBE2D3-227ENST00000508818 CHIC2Q9UKJ5 165 aa15.62■□□□□ 0.09
UBE2D3-227ENST00000508818 ZNF142P52746 1687 aaPredicted RBP15.62■□□□□ 0.09
UBE2D3-227ENST00000508818 KIF15Q9NS87 1388 aa15.62■□□□□ 0.09
UBE2D3-227ENST00000508818 ABCC5O15440 1437 aa15.61■□□□□ 0.09
UBE2D3-227ENST00000508818 FGD6Q6ZV73 1430 aa15.61■□□□□ 0.09
UBE2D3-227ENST00000508818 MAPK8IP2Q13387 824 aaPredicted RBP15.61■□□□□ 0.09
UBE2D3-227ENST00000508818 FAM50AQ14320 339 aaKnown RBP15.61■□□□□ 0.09
UBE2D3-227ENST00000508818 DUOX2Q9NRD8 1548 aa15.61■□□□□ 0.09
UBE2D3-227ENST00000508818 ANKLE2Q86XL3 938 aa15.6■□□□□ 0.09
UBE2D3-227ENST00000508818 DAPK1P53355 1430 aa15.6■□□□□ 0.09
UBE2D3-227ENST00000508818 EIF2AK4Q9P2K8 1649 aaKnown RBP15.59■□□□□ 0.09
UBE2D3-227ENST00000508818 ZNF335Q9H4Z2 1342 aaPredicted RBP15.59■□□□□ 0.09
UBE2D3-227ENST00000508818 ANKRD30AQ9BXX3 1397 aa15.59■□□□□ 0.09
UBE2D3-227ENST00000508818 SHANK2Q9UPX8 1470 aa15.59■□□□□ 0.09
UBE2D3-227ENST00000508818 DNMT1P26358 1616 aaKnown RBP15.58■□□□□ 0.09
UBE2D3-227ENST00000508818 RNF17Q9BXT8 1623 aaKnown RBP15.58■□□□□ 0.09
UBE2D3-227ENST00000508818 KANK1Q14678 1352 aa15.58■□□□□ 0.08
UBE2D3-227ENST00000508818 TCOF1Q13428 1488 aaKnown RBP15.58■□□□□ 0.08
UBE2D3-227ENST00000508818 NLRP1Q9C000 1473 aa15.58■□□□□ 0.08
UBE2D3-227ENST00000508818 ABCC3O15438 1527 aa15.58■□□□□ 0.08
UBE2D3-227ENST00000508818 DROSHAQ9NRR4 1374 aaKnown RBP eCLIP15.56■□□□□ 0.081e-10■■■□□ 14.9
UBE2D3-227ENST00000508818 ERBINQ96RT1 1412 aa15.56■□□□□ 0.08
UBE2D3-227ENST00000508818 ZC3H13Q5T200 1668 aaKnown RBP15.55■□□□□ 0.08
UBE2D3-227ENST00000508818 LTBP4Q8N2S1 1624 aa15.55■□□□□ 0.08
UBE2D3-227ENST00000508818 UGGT1Q9NYU2 1555 aa15.53■□□□□ 0.08
UBE2D3-227ENST00000508818 CROCC2H7BZ55 1655 aa15.53■□□□□ 0.08
UBE2D3-227ENST00000508818 IQSEC2Q5JU85 1478 aa15.52■□□□□ 0.08
UBE2D3-227ENST00000508818 UBAP1LF5GYI3 381 aa15.52■□□□□ 0.08
UBE2D3-227ENST00000508818 ERVK-7P63135 1459 aa15.52■□□□□ 0.07
UBE2D3-227ENST00000508818 STAG3Q9UJ98 1225 aa15.51■□□□□ 0.07
UBE2D3-227ENST00000508818 CFAP65Q6ZU64 1925 aaKnown RBP15.51■□□□□ 0.07
UBE2D3-227ENST00000508818 MROH1Q8NDA8 1641 aa15.5■□□□□ 0.07
UBE2D3-227ENST00000508818 SPATA31D1Q6ZQQ2 1576 aa15.5■□□□□ 0.07
UBE2D3-227ENST00000508818 CEP152O94986 1710 aa15.5■□□□□ 0.07
UBE2D3-227ENST00000508818 NPHP4O75161 1426 aaPredicted RBP15.48■□□□□ 0.07
UBE2D3-227ENST00000508818 ARHGAP31Q2M1Z3 1444 aa15.48■□□□□ 0.07
UBE2D3-227ENST00000508818 POLR1AO95602 1720 aaPredicted RBP15.48■□□□□ 0.07
UBE2D3-227ENST00000508818 EID1Q9Y6B2 187 aa15.47■□□□□ 0.07
UBE2D3-227ENST00000508818 PRDM15P57071 1507 aaPredicted RBP15.47■□□□□ 0.07
UBE2D3-227ENST00000508818 PPP4R3CPQ6ZMV5 832 aa15.46■□□□□ 0.07
UBE2D3-227ENST00000508818 TXNDC2Q86VQ3 553 aa15.46■□□□□ 0.07
UBE2D3-227ENST00000508818 PPARGC1BQ86YN6 1023 aaKnown RBP15.46■□□□□ 0.07
UBE2D3-227ENST00000508818 NEURL4Q96JN8 1562 aa15.45■□□□□ 0.06
UBE2D3-227ENST00000508818 ANKRD50Q9ULJ7 1429 aa15.44■□□□□ 0.06
UBE2D3-227ENST00000508818 TOM1O60784 492 aa15.44■□□□□ 0.06
UBE2D3-227ENST00000508818 ITGAEP38570 1179 aa15.44■□□□□ 0.06
UBE2D3-227ENST00000508818 MED14O60244 1454 aa15.44■□□□□ 0.06
UBE2D3-227ENST00000508818 ADGRL2O95490 1459 aa15.44■□□□□ 0.06
UBE2D3-227ENST00000508818 DEPDC5O75140 1603 aa15.43■□□□□ 0.06
UBE2D3-227ENST00000508818 CPS1P31327 1500 aa15.43■□□□□ 0.06
UBE2D3-227ENST00000508818 PIP4K2BP78356 416 aa15.41■□□□□ 0.06
UBE2D3-227ENST00000508818 IDI1Q13907 227 aa15.41■□□□□ 0.06
UBE2D3-227ENST00000508818 DISP3Q9P2K9 1392 aa15.4■□□□□ 0.06
UBE2D3-227ENST00000508818 LMTK2Q8IWU2 1503 aa15.4■□□□□ 0.06
UBE2D3-227ENST00000508818 LTKP29376 864 aa15.4■□□□□ 0.06
UBE2D3-227ENST00000508818 SLC52A1Q9NWF4 448 aa15.4■□□□□ 0.06
UBE2D3-227ENST00000508818 UBR1Q8IWV7 1749 aa15.4■□□□□ 0.06
UBE2D3-227ENST00000508818 SCAF11Q99590 1463 aaKnown RBP15.4■□□□□ 0.06
UBE2D3-227ENST00000508818 IQGAP1P46940 1657 aa15.39■□□□□ 0.05
UBE2D3-227ENST00000508818 BCANQ96GW7 911 aa15.38■□□□□ 0.05
UBE2D3-227ENST00000508818 TMEM2Q9UHN6 1383 aa15.37■□□□□ 0.05
UBE2D3-227ENST00000508818 VWDEQ8N2E2 1590 aa15.36■□□□□ 0.05
UBE2D3-227ENST00000508818 SLIT1O75093 1534 aa15.36■□□□□ 0.05
UBE2D3-227ENST00000508818 ROCK1Q13464 1354 aa15.36■□□□□ 0.05
UBE2D3-227ENST00000508818 PIK3C2BO00750 1634 aa15.35■□□□□ 0.05
UBE2D3-227ENST00000508818 ARHGAP23Q9P227 1491 aa15.35■□□□□ 0.05
UBE2D3-227ENST00000508818 EFCAB6Q5THR3 1501 aa15.35■□□□□ 0.05
UBE2D3-227ENST00000508818 HDGFP51858 240 aaKnown RBP15.35■□□□□ 0.05
UBE2D3-227ENST00000508818 CHGAP10645 457 aaKnown RBP15.34■□□□□ 0.05
UBE2D3-227ENST00000508818 NOS1P29475 1434 aa15.34■□□□□ 0.05
UBE2D3-227ENST00000508818 RPRD2Q5VT52 1461 aaKnown RBP15.33■□□□□ 0.04
UBE2D3-227ENST00000508818 PPP1R15AO75807 674 aaPredicted RBP15.32■□□□□ 0.04
UBE2D3-227ENST00000508818 NUP155O75694 1391 aa15.32■□□□□ 0.04
UBE2D3-227ENST00000508818 HSPA1LP34931 641 aa15.31■□□□□ 0.04
UBE2D3-227ENST00000508818 SLC26A8Q96RN1 970 aa15.31■□□□□ 0.04
UBE2D3-227ENST00000508818 SYNMO15061 1565 aa15.31■□□□□ 0.04
UBE2D3-227ENST00000508818 TET3O43151 1660 aa15.29■□□□□ 0.04
Retrieved 100 of 20,778 RNA–protein pairs in 7.9 ms