RNA–Protein interactions for RNA: ENST00000508708.1

CSNK1G3-204, Transcript of casein kinase 1 gamma 3, humanhuman

TSL 2

Gene CSNK1G3, Length 920 nt, Biotype processed transcript, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CSNK1G3-204ENST00000508708 UHRF1BP1Q6BDS2 1440 aa36.42■■■■□ 3.42
CSNK1G3-204ENST00000508708 KDM5DQ9BY66 1539 aa36.39■■■■□ 3.42
CSNK1G3-204ENST00000508708 DUOX2Q9NRD8 1548 aa36.39■■■■□ 3.42
CSNK1G3-204ENST00000508708 PTPRKQ15262 1439 aa36.36■■■■□ 3.41
CSNK1G3-204ENST00000508708 KIF15Q9NS87 1388 aa36.35■■■■□ 3.41
CSNK1G3-204ENST00000508708 MROH1Q8NDA8 1641 aa36.34■■■■□ 3.41
CSNK1G3-204ENST00000508708 ERBINQ96RT1 1412 aa36.29■■■■□ 3.4
CSNK1G3-204ENST00000508708 ADGRL2O95490 1459 aa36.27■■■■□ 3.4
CSNK1G3-204ENST00000508708 MYO3AQ8NEV4 1616 aa36.26■■■■□ 3.4
CSNK1G3-204ENST00000508708 PZPP20742 1482 aa36.25■■■■□ 3.39
CSNK1G3-204ENST00000508708 ABCC3O15438 1527 aa36.25■■■■□ 3.39
CSNK1G3-204ENST00000508708 ZC3H13Q5T200 1668 aaKnown RBP36.25■■■■□ 3.39
CSNK1G3-204ENST00000508708 NCOA1Q15788 1441 aa36.24■■■■□ 3.39
CSNK1G3-204ENST00000508708 FAM50AQ14320 339 aaKnown RBP36.23■■■■□ 3.39
CSNK1G3-204ENST00000508708 RRP7BPQ9NSQ0 103 aa36.23■■■■□ 3.39
CSNK1G3-204ENST00000508708 ZNF142P52746 1687 aaPredicted RBP36.23■■■■□ 3.39
CSNK1G3-204ENST00000508708 WASHC2CQ9Y4E1 1318 aa36.22■■■■□ 3.39
CSNK1G3-204ENST00000508708 ANKRD30AQ9BXX3 1397 aa36.22■■■■□ 3.39
CSNK1G3-204ENST00000508708 PRDM15P57071 1507 aaPredicted RBP36.22■■■■□ 3.39
CSNK1G3-204ENST00000508708 STRCQ7RTU9 1775 aa36.2■■■■□ 3.39
CSNK1G3-204ENST00000508708 DEPDC5O75140 1603 aa36.19■■■■□ 3.38
CSNK1G3-204ENST00000508708 CHIC2Q9UKJ5 165 aa36.19■■■■□ 3.38
CSNK1G3-204ENST00000508708 PPARGC1BQ86YN6 1023 aaKnown RBP36.17■■■■□ 3.38
CSNK1G3-204ENST00000508708 CEP170BQ9Y4F5 1589 aaPredicted RBP36.17■■■■□ 3.38
CSNK1G3-204ENST00000508708 CEP152O94986 1710 aa36.14■■■■□ 3.38
CSNK1G3-204ENST00000508708 FBXO31Q5XUX0 539 aaPredicted RBP36.11■■■■□ 3.37
CSNK1G3-204ENST00000508708 CAMSAP1Q5T5Y3 1602 aa36.1■■■■□ 3.37
CSNK1G3-204ENST00000508708 TNRQ92752 1358 aa36.09■■■■□ 3.37
CSNK1G3-204ENST00000508708 DROSHAQ9NRR4 1374 aaKnown RBP eCLIP36.09■■■■□ 3.377e-6■■■□□ 16.5
CSNK1G3-204ENST00000508708 A2ML1A8K2U0 1454 aa36.07■■■■□ 3.37
CSNK1G3-204ENST00000508708 SPATA31D1Q6ZQQ2 1576 aa36.06■■■■□ 3.36
CSNK1G3-204ENST00000508708 VWDEQ8N2E2 1590 aa36.06■■■■□ 3.36
CSNK1G3-204ENST00000508708 PLA2R1Q13018 1463 aa36.03■■■■□ 3.36
CSNK1G3-204ENST00000508708 ERVK-7P63135 1459 aa36.02■■■■□ 3.36
CSNK1G3-204ENST00000508708 ANKRD50Q9ULJ7 1429 aa36.01■■■■□ 3.36
CSNK1G3-204ENST00000508708 ROCK1Q13464 1354 aa36.01■■■■□ 3.35
CSNK1G3-204ENST00000508708 ARHGAP31Q2M1Z3 1444 aa36■■■■□ 3.35
CSNK1G3-204ENST00000508708 RRBP1Q9P2E9 1410 aaKnown RBP36■■■■□ 3.35
CSNK1G3-204ENST00000508708 LMTK2Q8IWU2 1503 aa36■■■■□ 3.35
CSNK1G3-204ENST00000508708 PTPRTO14522 1441 aa35.99■■■■□ 3.35
CSNK1G3-204ENST00000508708 NLRP1Q9C000 1473 aa35.99■■■■□ 3.35
CSNK1G3-204ENST00000508708 DMRT2Q9Y5R5 561 aa35.95■■■■□ 3.35
CSNK1G3-204ENST00000508708 KANK1Q14678 1352 aa35.93■■■■□ 3.34
CSNK1G3-204ENST00000508708 GRWD1Q9BQ67 446 aaKnown RBP eCLIP35.93■■■■□ 3.34
CSNK1G3-204ENST00000508708 UNC13BO14795 1591 aa35.89■■■■□ 3.34
CSNK1G3-204ENST00000508708 EFCAB6Q5THR3 1501 aa35.88■■■■□ 3.33
CSNK1G3-204ENST00000508708 UGGT1Q9NYU2 1555 aa35.86■■■■□ 3.33
CSNK1G3-204ENST00000508708 CFAP65Q6ZU64 1925 aaKnown RBP35.85■■■■□ 3.33
CSNK1G3-204ENST00000508708 NCKAP5LQ9HCH0 1330 aa35.84■■■■□ 3.33
CSNK1G3-204ENST00000508708 ITGAEP38570 1179 aa35.82■■■■□ 3.32
CSNK1G3-204ENST00000508708 PKD2Q13563 968 aa35.82■■■■□ 3.32
CSNK1G3-204ENST00000508708 ILDR1Q86SU0 546 aaPredicted RBP35.82■■■■□ 3.32
CSNK1G3-204ENST00000508708 NEURL4Q96JN8 1562 aa35.8■■■■□ 3.32
CSNK1G3-204ENST00000508708 POLR1AO95602 1720 aaPredicted RBP35.8■■■■□ 3.32
CSNK1G3-204ENST00000508708 TET3O43151 1660 aa35.76■■■■□ 3.32
CSNK1G3-204ENST00000508708 UBR1Q8IWV7 1749 aa35.76■■■■□ 3.31
CSNK1G3-204ENST00000508708 SYNMO15061 1565 aa35.75■■■■□ 3.31
CSNK1G3-204ENST00000508708 NOS1P29475 1434 aa35.74■■■■□ 3.31
CSNK1G3-204ENST00000508708 LTBP4Q8N2S1 1624 aa35.73■■■■□ 3.31
CSNK1G3-204ENST00000508708 THEMISQ8N1K5 641 aaPredicted RBP35.73■■■■□ 3.31
CSNK1G3-204ENST00000508708 RPRD2Q5VT52 1461 aaKnown RBP35.73■■■■□ 3.31
CSNK1G3-204ENST00000508708 IQGAP3Q86VI3 1631 aa35.72■■■■□ 3.31
CSNK1G3-204ENST00000508708 GCC2Q8IWJ2 1684 aa35.71■■■■□ 3.31
CSNK1G3-204ENST00000508708 CERKQ8TCT0 537 aa35.69■■■■□ 3.3
CSNK1G3-204ENST00000508708 PIK3C2BO00750 1634 aa35.68■■■■□ 3.3
CSNK1G3-204ENST00000508708 FBXO41Q8TF61 875 aa35.67■■■■□ 3.3
CSNK1G3-204ENST00000508708 MED14O60244 1454 aa35.67■■■■□ 3.3
CSNK1G3-204ENST00000508708 NAIPQ13075 1403 aa35.64■■■■□ 3.3
CSNK1G3-204ENST00000508708 KDM5AP29375 1690 aaKnown RBP35.63■■■■□ 3.29
CSNK1G3-204ENST00000508708 ARHGAP23Q9P227 1491 aa35.63■■■■□ 3.29
CSNK1G3-204ENST00000508708 ANKLE2Q86XL3 938 aa35.63■■■■□ 3.29
CSNK1G3-204ENST00000508708 SLIT1O75093 1534 aa35.62■■■■□ 3.29
CSNK1G3-204ENST00000508708 E9PCH4 1651 aa35.62■■■■□ 3.29
CSNK1G3-204ENST00000508708 NUP155O75694 1391 aa35.59■■■■□ 3.29
CSNK1G3-204ENST00000508708 ZNF335Q9H4Z2 1342 aaPredicted RBP35.58■■■■□ 3.29
CSNK1G3-204ENST00000508708 NPHP4O75161 1426 aaPredicted RBP35.57■■■■□ 3.29
CSNK1G3-204ENST00000508708 IDI1Q13907 227 aa35.57■■■■□ 3.28
CSNK1G3-204ENST00000508708 HFM1A2PYH4 1435 aa35.57■■■■□ 3.28
CSNK1G3-204ENST00000508708 IQGAP1P46940 1657 aa35.56■■■■□ 3.28
CSNK1G3-204ENST00000508708 ADGRB3O60242 1522 aa35.56■■■■□ 3.28
CSNK1G3-204ENST00000508708 SCAF11Q99590 1463 aaKnown RBP35.54■■■■□ 3.28
CSNK1G3-204ENST00000508708 SLC52A1Q9NWF4 448 aa35.51■■■■□ 3.28
CSNK1G3-204ENST00000508708 TMEM2Q9UHN6 1383 aa35.51■■■■□ 3.27
CSNK1G3-204ENST00000508708 IQSEC2Q5JU85 1478 aa35.5■■■■□ 3.27
CSNK1G3-204ENST00000508708 LTKP29376 864 aa35.47■■■■□ 3.27
CSNK1G3-204ENST00000508708 STAG3Q9UJ98 1225 aa35.42■■■■□ 3.26
CSNK1G3-204ENST00000508708 TMEM131LA2VDJ0 1609 aa35.42■■■■□ 3.26
CSNK1G3-204ENST00000508708 TXNDC2Q86VQ3 553 aa35.4■■■■□ 3.26
CSNK1G3-204ENST00000508708 CPS1P31327 1500 aa35.39■■■■□ 3.26
CSNK1G3-204ENST00000508708 MYO5BQ9ULV0 1848 aa35.39■■■■□ 3.26
CSNK1G3-204ENST00000508708 SPHKAPQ2M3C7 1700 aa35.36■■■■□ 3.25
CSNK1G3-204ENST00000508708 EID1Q9Y6B2 187 aa35.36■■■■□ 3.25
CSNK1G3-204ENST00000508708 ZFYVE9O95405 1425 aa35.35■■■■□ 3.25
CSNK1G3-204ENST00000508708 STRCP1A6NGW2 1772 aa35.33■■■■□ 3.25
CSNK1G3-204ENST00000508708 RIMS2Q9UQ26 1411 aa35.26■■■■□ 3.24
CSNK1G3-204ENST00000508708 TRPM2O94759 1503 aa35.26■■■■□ 3.23
CSNK1G3-204ENST00000508708 CLTCL1P53675 1640 aa35.21■■■■□ 3.23
CSNK1G3-204ENST00000508708 TRIM52Q96A61 297 aa35.2■■■■□ 3.23
CSNK1G3-204ENST00000508708 LRRC7Q96NW7 1537 aa35.19■■■■□ 3.22
CSNK1G3-204ENST00000508708 PLEKHG1Q9ULL1 1385 aa35.19■■■■□ 3.22
Retrieved 100 of 20,778 RNA–protein pairs in 12.4 ms