RNA–Protein interactions for RNA: ENST00000508546.5

NEDD9-211, Transcript of neural precursor cell expressed, developmentally down-regulated 9, humanhuman

TSL 5

Gene NEDD9, Length 581 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NEDD9-211ENST00000508546 POTEAQ6S8J7 498 aa15.43■□□□□ 0.06
NEDD9-211ENST00000508546 PLEKHH2Q8IVE3 1493 aa15.42■□□□□ 0.06
NEDD9-211ENST00000508546 LRRC7Q96NW7 1537 aa15.42■□□□□ 0.06
NEDD9-211ENST00000508546 ADGBQ8N7X0 1667 aa15.41■□□□□ 0.06
NEDD9-211ENST00000508546 A2MP01023 1474 aa15.41■□□□□ 0.06
NEDD9-211ENST00000508546 ZNF777Q9ULD5 760 aaPredicted RBP15.41■□□□□ 0.06
NEDD9-211ENST00000508546 IQGAP1P46940 1657 aa15.41■□□□□ 0.06
NEDD9-211ENST00000508546 HNRNPMP52272 730 aaKnown RBP eCLIP15.4■□□□□ 0.06
NEDD9-211ENST00000508546 DEPDC5O75140 1603 aa15.39■□□□□ 0.05
NEDD9-211ENST00000508546 NPHP4O75161 1426 aaPredicted RBP15.37■□□□□ 0.05
NEDD9-211ENST00000508546 CHIC1Q5VXU3 224 aa15.37■□□□□ 0.05
NEDD9-211ENST00000508546 MED14O60244 1454 aa15.37■□□□□ 0.05
NEDD9-211ENST00000508546 CFDP1Q9UEE9 299 aaPredicted RBP15.36■□□□□ 0.05
NEDD9-211ENST00000508546 GGT6Q6P531 493 aa15.35■□□□□ 0.05
NEDD9-211ENST00000508546 XIRP1Q702N8 1843 aaKnown RBP15.34■□□□□ 0.05
NEDD9-211ENST00000508546 CCNB3Q8WWL7 1395 aa15.34■□□□□ 0.05
NEDD9-211ENST00000508546 TNRQ92752 1358 aa15.34■□□□□ 0.05
NEDD9-211ENST00000508546 DROSHAQ9NRR4 1374 aaKnown RBP eCLIP15.34■□□□□ 0.05
NEDD9-211ENST00000508546 ZC3H13Q5T200 1668 aaKnown RBP15.32■□□□□ 0.04
NEDD9-211ENST00000508546 SRCAPQ6ZRS2 3230 aa15.31■□□□□ 0.04
NEDD9-211ENST00000508546 RTEL1-TNFRSF6BF6WH68 1400 aa15.31■□□□□ 0.04
NEDD9-211ENST00000508546 PZPP20742 1482 aa15.31■□□□□ 0.04
NEDD9-211ENST00000508546 TIAM1Q13009 1591 aa15.3■□□□□ 0.04
NEDD9-211ENST00000508546 UGGT1Q9NYU2 1555 aa15.3■□□□□ 0.04
NEDD9-211ENST00000508546 MBD5Q9P267 1494 aa15.3■□□□□ 0.04
NEDD9-211ENST00000508546 FAM135AQ9P2D6 1515 aa15.3■□□□□ 0.04
NEDD9-211ENST00000508546 MTUS2Q5JR59 1369 aa15.29■□□□□ 0.04
NEDD9-211ENST00000508546 ANKLE2Q86XL3 938 aa15.28■□□□□ 0.04
NEDD9-211ENST00000508546 DHX29Q7Z478 1369 aaKnown RBP15.27■□□□□ 0.04
NEDD9-211ENST00000508546 KDM5DQ9BY66 1539 aa15.27■□□□□ 0.03
NEDD9-211ENST00000508546 NLRP1Q9C000 1473 aa15.27■□□□□ 0.03
NEDD9-211ENST00000508546 ZNF644Q9H582 1327 aaPredicted RBP15.26■□□□□ 0.03
NEDD9-211ENST00000508546 FBXO31Q5XUX0 539 aaPredicted RBP15.26■□□□□ 0.03
NEDD9-211ENST00000508546 EHBP1L1Q8N3D4 1523 aa15.26■□□□□ 0.03
NEDD9-211ENST00000508546 ROBO1Q9Y6N7 1651 aa15.25■□□□□ 0.03
NEDD9-211ENST00000508546 UPF1Q92900 1129 aaKnown RBP eCLIP15.25■□□□□ 0.03
NEDD9-211ENST00000508546 FAM135BQ49AJ0 1406 aa15.23■□□□□ 0.03
NEDD9-211ENST00000508546 CEP162Q5TB80 1403 aa15.23■□□□□ 0.03
NEDD9-211ENST00000508546 KIF3BO15066 747 aa15.22■□□□□ 0.03
NEDD9-211ENST00000508546 CCDC141Q6ZP82 1450 aa15.21■□□□□ 0.03
NEDD9-211ENST00000508546 MIA2Q96PC5 1412 aa15.2■□□□□ 0.02
NEDD9-211ENST00000508546 THEMISQ8N1K5 641 aaPredicted RBP15.2■□□□□ 0.02
NEDD9-211ENST00000508546 RSPH4AQ5TD94 716 aa15.19■□□□□ 0.02
NEDD9-211ENST00000508546 WASHC2CQ9Y4E1 1318 aa15.17■□□□□ 0.02
NEDD9-211ENST00000508546 MAP3K1Q13233 1512 aa15.17■□□□□ 0.02
NEDD9-211ENST00000508546 CAMSAP2Q08AD1 1489 aa15.17■□□□□ 0.02
NEDD9-211ENST00000508546 LRP6O75581 1613 aa15.17■□□□□ 0.02
NEDD9-211ENST00000508546 ARHGEF5Q12774 1597 aa15.16■□□□□ 0.02
NEDD9-211ENST00000508546 PHLPP1O60346 1717 aa15.16■□□□□ 0.02
NEDD9-211ENST00000508546 UBR1Q8IWV7 1749 aa15.16■□□□□ 0.02
NEDD9-211ENST00000508546 SCAF11Q99590 1463 aaKnown RBP15.15■□□□□ 0.02
NEDD9-211ENST00000508546 NCOA2Q15596 1464 aa15.14■□□□□ 0.01
NEDD9-211ENST00000508546 CFAP65Q6ZU64 1925 aaKnown RBP15.13■□□□□ 0.01
NEDD9-211ENST00000508546 TRIM52Q96A61 297 aa15.13■□□□□ 0.01
NEDD9-211ENST00000508546 COL16A1Q07092 1604 aaPredicted RBP15.13■□□□□ 0.01
NEDD9-211ENST00000508546 LRRC9Q6ZRR7 1453 aa15.12■□□□□ 0.01
NEDD9-211ENST00000508546 EIF2AK4Q9P2K8 1649 aaKnown RBP15.11■□□□□ 0.01
NEDD9-211ENST00000508546 ABCC3O15438 1527 aa15.11■□□□□ 0.01
NEDD9-211ENST00000508546 MAST1Q9Y2H9 1570 aa15.11■□□□□ 0.01
NEDD9-211ENST00000508546 ERVK-7P63135 1459 aa15.1■□□□□ 0.01
NEDD9-211ENST00000508546 TMEM94Q12767 1356 aa15.1■□□□□ 0.01
NEDD9-211ENST00000508546 JCADQ9P266 1359 aa15.1■□□□□ 0.01
NEDD9-211ENST00000508546 ARHGAP23Q9P227 1491 aa15.09■□□□□ 0.01
NEDD9-211ENST00000508546 TSPY4P0CV99 314 aa15.09■□□□□ 0.01
NEDD9-211ENST00000508546 TSPY10P0CW01 314 aa15.09■□□□□ 0.01
NEDD9-211ENST00000508546 SLIT1O75093 1534 aa15.08■□□□□ 0.01
NEDD9-211ENST00000508546 CEP152O94986 1710 aa15.08■□□□□ 0
NEDD9-211ENST00000508546 MROH1Q8NDA8 1641 aa15.07■□□□□ 0
NEDD9-211ENST00000508546 CDK12Q9NYV4 1490 aaPredicted RBP15.07■□□□□ 0
NEDD9-211ENST00000508546 SHPRHQ149N8 1683 aa15.04■□□□□ -0
NEDD9-211ENST00000508546 NWD1Q149M9 1564 aa15.04■□□□□ -0
NEDD9-211ENST00000508546 LTKP29376 864 aa15.03■□□□□ -0
NEDD9-211ENST00000508546 PRDM15P57071 1507 aaPredicted RBP15.02■□□□□ -0
NEDD9-211ENST00000508546 ZNF772Q68DY9 489 aaPredicted RBP15.02■□□□□ -0
NEDD9-211ENST00000508546 SETBP1Q9Y6X0 1596 aa15.01□□□□□ -0.01
NEDD9-211ENST00000508546 NKTRP30414 1462 aaKnown RBP15.01□□□□□ -0.01
NEDD9-211ENST00000508546 RGS12O14924 1447 aa15□□□□□ -0.01
NEDD9-211ENST00000508546 FGD6Q6ZV73 1430 aa15□□□□□ -0.01
NEDD9-211ENST00000508546 RBM33Q96EV2 1170 aaKnown RBP15□□□□□ -0.01
NEDD9-211ENST00000508546 DUOX2Q9NRD8 1548 aa15□□□□□ -0.01
NEDD9-211ENST00000508546 ARHGAP31Q2M1Z3 1444 aa15□□□□□ -0.01
NEDD9-211ENST00000508546 KDM5AP29375 1690 aaKnown RBP15□□□□□ -0.01
NEDD9-211ENST00000508546 PIK3C2BO00750 1634 aa14.99□□□□□ -0.01
NEDD9-211ENST00000508546 SPATA31A6Q5VVP1 1343 aa14.98□□□□□ -0.01
NEDD9-211ENST00000508546 MEX3CQ5U5Q3 659 aaKnown RBP14.98□□□□□ -0.01
NEDD9-211ENST00000508546 AHDC1Q5TGY3 1603 aaPredicted RBP14.97□□□□□ -0.01
NEDD9-211ENST00000508546 RXRBP28702 533 aa14.97□□□□□ -0.01
NEDD9-211ENST00000508546 TXNDC2Q86VQ3 553 aa14.97□□□□□ -0.01
NEDD9-211ENST00000508546 MSH6P52701 1360 aa14.96□□□□□ -0.02
NEDD9-211ENST00000508546 DIP2AQ14689 1571 aa14.95□□□□□ -0.02
NEDD9-211ENST00000508546 MYOM3Q5VTT5 1437 aa14.95□□□□□ -0.02
NEDD9-211ENST00000508546 EID1Q9Y6B2 187 aa14.95□□□□□ -0.02
NEDD9-211ENST00000508546 CROCC2H7BZ55 1655 aa14.95□□□□□ -0.02
NEDD9-211ENST00000508546 TET3O43151 1660 aa14.95□□□□□ -0.02
NEDD9-211ENST00000508546 VPS8Q8N3P4 1428 aa14.93□□□□□ -0.02
NEDD9-211ENST00000508546 ERBINQ96RT1 1412 aa14.93□□□□□ -0.02
NEDD9-211ENST00000508546 TMEM2Q9UHN6 1383 aa14.93□□□□□ -0.02
NEDD9-211ENST00000508546 KCNA6P17658 529 aa14.92□□□□□ -0.02
NEDD9-211ENST00000508546 PROSER2Q86WR7 435 aaPredicted RBP14.92□□□□□ -0.02
NEDD9-211ENST00000508546 KIF15Q9NS87 1388 aa14.91□□□□□ -0.02
Retrieved 100 of 20,778 RNA–protein pairs in 72.3 ms