RNA–Protein interactions for RNA: ENST00000508317.5

DDR1-263, Transcript of discoidin domain receptor tyrosine kinase 1, humanhuman

TSL 4

Gene DDR1, Length 538 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
DDR1-263ENST00000508317 PKD2Q13563 968 aa25.69■■□□□ 1.7
DDR1-263ENST00000508317 LRRC9Q6ZRR7 1453 aa25.66■■□□□ 1.7
DDR1-263ENST00000508317 PTPRKQ15262 1439 aa25.63■■□□□ 1.69
DDR1-263ENST00000508317 CLTCQ00610 1675 aaKnown RBP25.63■■□□□ 1.69
DDR1-263ENST00000508317 MED1Q15648 1581 aaPredicted RBP25.61■■□□□ 1.69
DDR1-263ENST00000508317 TCOF1Q13428 1488 aaKnown RBP25.6■■□□□ 1.69
DDR1-263ENST00000508317 MAP3K1Q13233 1512 aa25.58■■□□□ 1.69
DDR1-263ENST00000508317 TNRQ92752 1358 aa25.57■■□□□ 1.68
DDR1-263ENST00000508317 MIA2Q96PC5 1412 aa25.57■■□□□ 1.68
DDR1-263ENST00000508317 MYO3AQ8NEV4 1616 aa25.57■■□□□ 1.68
DDR1-263ENST00000508317 PLA2R1Q13018 1463 aa25.57■■□□□ 1.68
DDR1-263ENST00000508317 FAM135AQ9P2D6 1515 aa25.57■■□□□ 1.68
DDR1-263ENST00000508317 ARHGEF5Q12774 1597 aa25.56■■□□□ 1.68
DDR1-263ENST00000508317 ZNF142P52746 1687 aaPredicted RBP25.56■■□□□ 1.68
DDR1-263ENST00000508317 HSPA1LP34931 641 aa25.56■■□□□ 1.68
DDR1-263ENST00000508317 KANK4Q5T7N3 995 aaPredicted RBP25.56■■□□□ 1.68
DDR1-263ENST00000508317 KDM5DQ9BY66 1539 aa25.55■■□□□ 1.68
DDR1-263ENST00000508317 MYOM3Q5VTT5 1437 aa25.54■■□□□ 1.68
DDR1-263ENST00000508317 THEMISQ8N1K5 641 aaPredicted RBP25.54■■□□□ 1.68
DDR1-263ENST00000508317 CEP170BQ9Y4F5 1589 aaPredicted RBP25.53■■□□□ 1.68
DDR1-263ENST00000508317 A2ML1A8K2U0 1454 aa25.53■■□□□ 1.68
DDR1-263ENST00000508317 FBXO31Q5XUX0 539 aaPredicted RBP25.52■■□□□ 1.68
DDR1-263ENST00000508317 ANKLE2Q86XL3 938 aa25.5■■□□□ 1.67
DDR1-263ENST00000508317 PZPP20742 1482 aa25.49■■□□□ 1.67
DDR1-263ENST00000508317 ALKQ9UM73 1620 aa25.44■■□□□ 1.66
DDR1-263ENST00000508317 NLRP1Q9C000 1473 aa25.43■■□□□ 1.66
DDR1-263ENST00000508317 PIP4K2BP78356 416 aa25.43■■□□□ 1.66
DDR1-263ENST00000508317 SCAF1Q9H7N4 1312 aaKnown RBP25.4■■□□□ 1.66
DDR1-263ENST00000508317 NEURL4Q96JN8 1562 aa25.4■■□□□ 1.66
DDR1-263ENST00000508317 MAST1Q9Y2H9 1570 aa25.4■■□□□ 1.66
DDR1-263ENST00000508317 RRP7BPQ9NSQ0 103 aa25.4■■□□□ 1.66
DDR1-263ENST00000508317 KANK1Q14678 1352 aa25.4■■□□□ 1.66
DDR1-263ENST00000508317 KIF15Q9NS87 1388 aa25.39■■□□□ 1.65
DDR1-263ENST00000508317 DNMT1P26358 1616 aaKnown RBP25.38■■□□□ 1.65
DDR1-263ENST00000508317 DROSHAQ9NRR4 1374 aaKnown RBP eCLIP25.38■■□□□ 1.65
DDR1-263ENST00000508317 DUOX2Q9NRD8 1548 aa25.37■■□□□ 1.65
DDR1-263ENST00000508317 GRWD1Q9BQ67 446 aaKnown RBP eCLIP25.37■■□□□ 1.65
DDR1-263ENST00000508317 UGGT1Q9NYU2 1555 aa25.35■■□□□ 1.65
DDR1-263ENST00000508317 ANKRD30AQ9BXX3 1397 aa25.34■■□□□ 1.65
DDR1-263ENST00000508317 CPS1P31327 1500 aa25.33■■□□□ 1.65
DDR1-263ENST00000508317 STAG3Q9UJ98 1225 aa25.33■■□□□ 1.65
DDR1-263ENST00000508317 SHANK2Q9UPX8 1470 aa25.33■■□□□ 1.65
DDR1-263ENST00000508317 ERBINQ96RT1 1412 aa25.32■■□□□ 1.64
DDR1-263ENST00000508317 TOM1O60784 492 aa25.32■■□□□ 1.64
DDR1-263ENST00000508317 EIF2AK4Q9P2K8 1649 aaKnown RBP25.32■■□□□ 1.64
DDR1-263ENST00000508317 ABCC3O15438 1527 aa25.32■■□□□ 1.64
DDR1-263ENST00000508317 CHIC2Q9UKJ5 165 aa25.31■■□□□ 1.64
DDR1-263ENST00000508317 VWDEQ8N2E2 1590 aa25.31■■□□□ 1.64
DDR1-263ENST00000508317 FGD6Q6ZV73 1430 aa25.3■■□□□ 1.64
DDR1-263ENST00000508317 FAM50AQ14320 339 aaKnown RBP25.3■■□□□ 1.64
DDR1-263ENST00000508317 RNF17Q9BXT8 1623 aaKnown RBP25.3■■□□□ 1.64
DDR1-263ENST00000508317 ZC3H13Q5T200 1668 aaKnown RBP25.29■■□□□ 1.64
DDR1-263ENST00000508317 ABCC5O15440 1437 aa25.29■■□□□ 1.64
DDR1-263ENST00000508317 EID1Q9Y6B2 187 aa25.29■■□□□ 1.64
DDR1-263ENST00000508317 NPHP4O75161 1426 aaPredicted RBP25.28■■□□□ 1.64
DDR1-263ENST00000508317 DAPK1P53355 1430 aa25.28■■□□□ 1.64
DDR1-263ENST00000508317 PTPN23Q9H3S7 1636 aa25.27■■□□□ 1.64
DDR1-263ENST00000508317 POLR1AO95602 1720 aaPredicted RBP25.26■■□□□ 1.63
DDR1-263ENST00000508317 ERVK-7P63135 1459 aa25.26■■□□□ 1.63
DDR1-263ENST00000508317 PHF23Q9BUL5 403 aaPredicted RBP25.24■■□□□ 1.63
DDR1-263ENST00000508317 RGS17Q9UGC6 210 aaPredicted RBP25.22■■□□□ 1.63
DDR1-263ENST00000508317 TXNDC2Q86VQ3 553 aa25.21■■□□□ 1.63
DDR1-263ENST00000508317 ARHGAP31Q2M1Z3 1444 aa25.2■■□□□ 1.63
DDR1-263ENST00000508317 MED14O60244 1454 aa25.19■■□□□ 1.62
DDR1-263ENST00000508317 SENP3Q9H4L4 574 aaPredicted RBP25.18■■□□□ 1.62
DDR1-263ENST00000508317 STRCP1A6NGW2 1772 aa25.16■■□□□ 1.62
DDR1-263ENST00000508317 DEPDC5O75140 1603 aa25.15■■□□□ 1.62
DDR1-263ENST00000508317 PRDM15P57071 1507 aaPredicted RBP25.15■■□□□ 1.62
DDR1-263ENST00000508317 SCAF11Q99590 1463 aaKnown RBP25.13■■□□□ 1.61
DDR1-263ENST00000508317 LRRC7Q96NW7 1537 aa25.12■■□□□ 1.61
DDR1-263ENST00000508317 MROH1Q8NDA8 1641 aa25.12■■□□□ 1.61
DDR1-263ENST00000508317 CROCC2H7BZ55 1655 aa25.12■■□□□ 1.61
DDR1-263ENST00000508317 BCANQ96GW7 911 aa25.11■■□□□ 1.61
DDR1-263ENST00000508317 HDGFP51858 240 aaKnown RBP25.09■■□□□ 1.61
DDR1-263ENST00000508317 SLC52A1Q9NWF4 448 aa25.09■■□□□ 1.61
DDR1-263ENST00000508317 CEP152O94986 1710 aa25.09■■□□□ 1.61
DDR1-263ENST00000508317 IQGAP1P46940 1657 aa25.07■■□□□ 1.6
DDR1-263ENST00000508317 ANKRD50Q9ULJ7 1429 aa25.06■■□□□ 1.6
DDR1-263ENST00000508317 LTKP29376 864 aa25.05■■□□□ 1.6
DDR1-263ENST00000508317 IDI1Q13907 227 aa25.05■■□□□ 1.6
DDR1-263ENST00000508317 TMEM2Q9UHN6 1383 aa25.05■■□□□ 1.6
DDR1-263ENST00000508317 ADGRL2O95490 1459 aa25.03■■□□□ 1.6
DDR1-263ENST00000508317 LMTK2Q8IWU2 1503 aa25.03■■□□□ 1.6
DDR1-263ENST00000508317 PPP1R15AO75807 674 aaPredicted RBP25.02■■□□□ 1.6
DDR1-263ENST00000508317 SLIT1O75093 1534 aa25.02■■□□□ 1.6
DDR1-263ENST00000508317 SYNMO15061 1565 aa25.01■■□□□ 1.59
DDR1-263ENST00000508317 ARHGAP23Q9P227 1491 aa25■■□□□ 1.59
DDR1-263ENST00000508317 EFCAB6Q5THR3 1501 aa24.99■■□□□ 1.59
DDR1-263ENST00000508317 UBR1Q8IWV7 1749 aa24.99■■□□□ 1.59
DDR1-263ENST00000508317 ITGAEP38570 1179 aa24.98■■□□□ 1.59
DDR1-263ENST00000508317 POTEAQ6S8J7 498 aa24.98■■□□□ 1.59
DDR1-263ENST00000508317 CFAP65Q6ZU64 1925 aaKnown RBP24.96■■□□□ 1.59
DDR1-263ENST00000508317 CHGAP10645 457 aaKnown RBP24.96■■□□□ 1.59
DDR1-263ENST00000508317 RPRD2Q5VT52 1461 aaKnown RBP24.96■■□□□ 1.59
DDR1-263ENST00000508317 KCNA6P17658 529 aa24.93■■□□□ 1.58
DDR1-263ENST00000508317 PROSER2Q86WR7 435 aaPredicted RBP24.93■■□□□ 1.58
DDR1-263ENST00000508317 ABCF1Q8NE71 845 aaKnown RBP eCLIP24.93■■□□□ 1.58
DDR1-263ENST00000508317 SLC26A8Q96RN1 970 aa24.93■■□□□ 1.58
DDR1-263ENST00000508317 NOS1P29475 1434 aa24.93■■□□□ 1.58
DDR1-263ENST00000508317 ROCK1Q13464 1354 aa24.93■■□□□ 1.58
Retrieved 100 of 20,778 RNA–protein pairs in 17 ms