RNA–Protein interactions for RNA: ENST00000508290.5

SFXN1-209, Transcript of sideroflexin 1, humanhuman

TSL 4

Gene SFXN1, Length 592 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SFXN1-209ENST00000508290 KDM5DQ9BY66 1539 aa30.65■■■□□ 2.5
SFXN1-209ENST00000508290 KIF15Q9NS87 1388 aa30.65■■■□□ 2.5
SFXN1-209ENST00000508290 ANKRD30AQ9BXX3 1397 aa30.63■■■□□ 2.49
SFXN1-209ENST00000508290 ERBINQ96RT1 1412 aa30.63■■■□□ 2.49
SFXN1-209ENST00000508290 RNF17Q9BXT8 1623 aaKnown RBP30.62■■■□□ 2.49
SFXN1-209ENST00000508290 FAM50AQ14320 339 aaKnown RBP30.6■■■□□ 2.49
SFXN1-209ENST00000508290 WASHC2CQ9Y4E1 1318 aa30.59■■■□□ 2.49
SFXN1-209ENST00000508290 ADGRL2O95490 1459 aa30.57■■■□□ 2.48
SFXN1-209ENST00000508290 PTPRKQ15262 1439 aa30.56■■■□□ 2.48
SFXN1-209ENST00000508290 NCOA1Q15788 1441 aa30.55■■■□□ 2.48
SFXN1-209ENST00000508290 DROSHAQ9NRR4 1374 aaKnown RBP eCLIP30.54■■■□□ 2.48
SFXN1-209ENST00000508290 HSPA2P54652 639 aa30.54■■■□□ 2.48
SFXN1-209ENST00000508290 RRP7BPQ9NSQ0 103 aa30.54■■■□□ 2.48
SFXN1-209ENST00000508290 ZC3H13Q5T200 1668 aaKnown RBP30.54■■■□□ 2.48
SFXN1-209ENST00000508290 PZPP20742 1482 aa30.51■■■□□ 2.48
SFXN1-209ENST00000508290 CHIC2Q9UKJ5 165 aa30.48■■■□□ 2.47
SFXN1-209ENST00000508290 ABCC3O15438 1527 aa30.47■■■□□ 2.47
SFXN1-209ENST00000508290 PRDM15P57071 1507 aaPredicted RBP30.47■■■□□ 2.47
SFXN1-209ENST00000508290 MROH1Q8NDA8 1641 aa30.46■■■□□ 2.47
SFXN1-209ENST00000508290 DMRT2Q9Y5R5 561 aa30.44■■■□□ 2.46
SFXN1-209ENST00000508290 KANK1Q14678 1352 aa30.43■■■□□ 2.46
SFXN1-209ENST00000508290 MYO3AQ8NEV4 1616 aa30.43■■■□□ 2.46
SFXN1-209ENST00000508290 ROCK1Q13464 1354 aa30.42■■■□□ 2.46
SFXN1-209ENST00000508290 DEPDC5O75140 1603 aa30.42■■■□□ 2.46
SFXN1-209ENST00000508290 ZNF142P52746 1687 aaPredicted RBP30.42■■■□□ 2.46
SFXN1-209ENST00000508290 TNRQ92752 1358 aa30.41■■■□□ 2.46
SFXN1-209ENST00000508290 CEP170BQ9Y4F5 1589 aaPredicted RBP30.39■■■□□ 2.46
SFXN1-209ENST00000508290 PPARGC1BQ86YN6 1023 aaKnown RBP30.38■■■□□ 2.45
SFXN1-209ENST00000508290 ANKRD50Q9ULJ7 1429 aa30.38■■■□□ 2.45
SFXN1-209ENST00000508290 ARHGAP31Q2M1Z3 1444 aa30.37■■■□□ 2.45
SFXN1-209ENST00000508290 RRBP1Q9P2E9 1410 aaKnown RBP30.37■■■□□ 2.45
SFXN1-209ENST00000508290 A2ML1A8K2U0 1454 aa30.36■■■□□ 2.45
SFXN1-209ENST00000508290 NLRP1Q9C000 1473 aa30.35■■■□□ 2.45
SFXN1-209ENST00000508290 CAMSAP1Q5T5Y3 1602 aa30.33■■■□□ 2.45
SFXN1-209ENST00000508290 PLA2R1Q13018 1463 aa30.33■■■□□ 2.45
SFXN1-209ENST00000508290 FBXO31Q5XUX0 539 aaPredicted RBP30.33■■■□□ 2.45
SFXN1-209ENST00000508290 SPATA31D1Q6ZQQ2 1576 aa30.32■■■□□ 2.45
SFXN1-209ENST00000508290 LMTK2Q8IWU2 1503 aa30.32■■■□□ 2.44
SFXN1-209ENST00000508290 PTPRTO14522 1441 aa30.3■■■□□ 2.44
SFXN1-209ENST00000508290 VWDEQ8N2E2 1590 aa30.3■■■□□ 2.44
SFXN1-209ENST00000508290 GRWD1Q9BQ67 446 aaKnown RBP eCLIP30.29■■■□□ 2.448e-7■■□□□ 12.1
SFXN1-209ENST00000508290 CEP152O94986 1710 aa30.29■■■□□ 2.44
SFXN1-209ENST00000508290 ERVK-7P63135 1459 aa30.29■■■□□ 2.44
SFXN1-209ENST00000508290 STRCQ7RTU9 1775 aa30.28■■■□□ 2.44
SFXN1-209ENST00000508290 PKD2Q13563 968 aa30.26■■■□□ 2.43
SFXN1-209ENST00000508290 ITGAEP38570 1179 aa30.21■■■□□ 2.43
SFXN1-209ENST00000508290 THEMISQ8N1K5 641 aaPredicted RBP30.21■■■□□ 2.43
SFXN1-209ENST00000508290 EFCAB6Q5THR3 1501 aa30.19■■■□□ 2.42
SFXN1-209ENST00000508290 UNC13BO14795 1591 aa30.19■■■□□ 2.42
SFXN1-209ENST00000508290 UGGT1Q9NYU2 1555 aa30.19■■■□□ 2.42
SFXN1-209ENST00000508290 RPRD2Q5VT52 1461 aaKnown RBP30.18■■■□□ 2.42
SFXN1-209ENST00000508290 NCKAP5LQ9HCH0 1330 aa30.11■■■□□ 2.41
SFXN1-209ENST00000508290 TET3O43151 1660 aa30.11■■■□□ 2.41
SFXN1-209ENST00000508290 ANKLE2Q86XL3 938 aa30.09■■■□□ 2.41
SFXN1-209ENST00000508290 NOS1P29475 1434 aa30.08■■■□□ 2.41
SFXN1-209ENST00000508290 ILDR1Q86SU0 546 aaPredicted RBP30.08■■■□□ 2.41
SFXN1-209ENST00000508290 IQGAP3Q86VI3 1631 aa30.06■■■□□ 2.4
SFXN1-209ENST00000508290 GCC2Q8IWJ2 1684 aa30.04■■■□□ 2.4
SFXN1-209ENST00000508290 NUP155O75694 1391 aa30.04■■■□□ 2.4
SFXN1-209ENST00000508290 SLC52A1Q9NWF4 448 aa30.04■■■□□ 2.4
SFXN1-209ENST00000508290 POLR1AO95602 1720 aaPredicted RBP30.04■■■□□ 2.4
SFXN1-209ENST00000508290 KDM5AP29375 1690 aaKnown RBP30.03■■■□□ 2.4
SFXN1-209ENST00000508290 NAIPQ13075 1403 aa30.03■■■□□ 2.4
SFXN1-209ENST00000508290 CERKQ8TCT0 537 aa30.02■■■□□ 2.4
SFXN1-209ENST00000508290 HFM1A2PYH4 1435 aa30.02■■■□□ 2.4
SFXN1-209ENST00000508290 UBR1Q8IWV7 1749 aa30.02■■■□□ 2.4
SFXN1-209ENST00000508290 MED14O60244 1454 aa30.01■■■□□ 2.4
SFXN1-209ENST00000508290 FBXO41Q8TF61 875 aa30.01■■■□□ 2.39
SFXN1-209ENST00000508290 SYNMO15061 1565 aa29.98■■■□□ 2.39
SFXN1-209ENST00000508290 NEURL4Q96JN8 1562 aa29.98■■■□□ 2.39
SFXN1-209ENST00000508290 CFAP65Q6ZU64 1925 aaKnown RBP29.98■■■□□ 2.39
SFXN1-209ENST00000508290 SLIT1O75093 1534 aa29.97■■■□□ 2.39
SFXN1-209ENST00000508290 STAG3Q9UJ98 1225 aa29.97■■■□□ 2.39
SFXN1-209ENST00000508290 ARHGAP23Q9P227 1491 aa29.96■■■□□ 2.39
SFXN1-209ENST00000508290 IDI1Q13907 227 aa29.96■■■□□ 2.39
SFXN1-209ENST00000508290 PIK3C2BO00750 1634 aa29.96■■■□□ 2.39
SFXN1-209ENST00000508290 NPHP4O75161 1426 aaPredicted RBP29.96■■■□□ 2.39
SFXN1-209ENST00000508290 IQSEC2Q5JU85 1478 aa29.93■■■□□ 2.38
SFXN1-209ENST00000508290 LTBP4Q8N2S1 1624 aa29.93■■■□□ 2.38
SFXN1-209ENST00000508290 SCAF11Q99590 1463 aaKnown RBP29.93■■■□□ 2.38
SFXN1-209ENST00000508290 EID1Q9Y6B2 187 aa29.92■■■□□ 2.38
SFXN1-209ENST00000508290 ADGRB3O60242 1522 aa29.91■■■□□ 2.38
SFXN1-209ENST00000508290 TMEM2Q9UHN6 1383 aa29.91■■■□□ 2.38
SFXN1-209ENST00000508290 E9PCH4 1651 aa29.9■■■□□ 2.38
SFXN1-209ENST00000508290 ACIN1Q9UKV3 1341 aaKnown RBP29.88■■■□□ 2.37
SFXN1-209ENST00000508290 IQGAP1P46940 1657 aa29.87■■■□□ 2.37
SFXN1-209ENST00000508290 TXNDC2Q86VQ3 553 aa29.86■■■□□ 2.37
SFXN1-209ENST00000508290 ZNF335Q9H4Z2 1342 aaPredicted RBP29.86■■■□□ 2.37
SFXN1-209ENST00000508290 CPS1P31327 1500 aa29.82■■■□□ 2.36
SFXN1-209ENST00000508290 HDGFP51858 240 aaKnown RBP29.82■■■□□ 2.36
SFXN1-209ENST00000508290 LTKP29376 864 aa29.8■■■□□ 2.36
SFXN1-209ENST00000508290 TRIM52Q96A61 297 aa29.77■■■□□ 2.36
SFXN1-209ENST00000508290 TMEM131LA2VDJ0 1609 aa29.77■■■□□ 2.36
SFXN1-209ENST00000508290 SPHKAPQ2M3C7 1700 aa29.74■■■□□ 2.35
SFXN1-209ENST00000508290 ABCF1Q8NE71 845 aaKnown RBP eCLIP29.73■■■□□ 2.35
SFXN1-209ENST00000508290 ZFYVE9O95405 1425 aa29.72■■■□□ 2.35
SFXN1-209ENST00000508290 TRPM2O94759 1503 aa29.71■■■□□ 2.35
SFXN1-209ENST00000508290 SLC4A1APQ9BWU0 796 aaKnown RBP29.7■■■□□ 2.35
SFXN1-209ENST00000508290 RIMS2Q9UQ26 1411 aa29.69■■■□□ 2.34
SFXN1-209ENST00000508290 CHGAP10645 457 aaKnown RBP29.68■■■□□ 2.34
Retrieved 100 of 20,778 RNA–protein pairs in 8.5 ms