RNA–Protein interactions for RNA: ENST00000508170.5

PDGFRA-206, Transcript of platelet derived growth factor receptor alpha, humanhuman

TSL 1 (best) BASIC

Gene PDGFRA, Length 2,202 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PDGFRA-206ENST00000508170 TXNDC2Q86VQ3 553 aa10.28□□□□□ -0.76
PDGFRA-206ENST00000508170 UBXN4Q92575 508 aa10.27□□□□□ -0.76
PDGFRA-206ENST00000508170 SKIV2LQ15477 1246 aaKnown RBP10.27□□□□□ -0.77
PDGFRA-206ENST00000508170 VGFO15240 615 aaPredicted RBP10.26□□□□□ -0.77
PDGFRA-206ENST00000508170 FOXD4L6Q3SYB3 417 aaPredicted RBP10.26□□□□□ -0.77
PDGFRA-206ENST00000508170 FOXD4L3Q6VB84 417 aaPredicted RBP10.26□□□□□ -0.77
PDGFRA-206ENST00000508170 APBB1IPQ7Z5R6 666 aaPredicted RBP10.25□□□□□ -0.77
PDGFRA-206ENST00000508170 CHRM1P11229 460 aaPredicted RBP10.25□□□□□ -0.77
PDGFRA-206ENST00000508170 FOSBP53539 338 aa10.25□□□□□ -0.77
PDGFRA-206ENST00000508170 SPINK5Q9NQ38 1064 aaPredicted RBP10.25□□□□□ -0.77
PDGFRA-206ENST00000508170 USTQ9Y2C2 406 aa10.24□□□□□ -0.77
PDGFRA-206ENST00000508170 TERF2IPQ9NYB0 399 aa10.23□□□□□ -0.77
PDGFRA-206ENST00000508170 ZNF330Q9Y3S2 320 aaPredicted RBP10.23□□□□□ -0.77
PDGFRA-206ENST00000508170 RBM10P98175 930 aaKnown RBP10.22□□□□□ -0.77
PDGFRA-206ENST00000508170 OS9Q13438 667 aaPredicted RBP10.21□□□□□ -0.77
PDGFRA-206ENST00000508170 RALBP1Q15311 655 aa10.21□□□□□ -0.77
PDGFRA-206ENST00000508170 PARP9Q8IXQ6 854 aa10.21□□□□□ -0.77
PDGFRA-206ENST00000508170 FAM9BQ8IZU0 186 aa10.21□□□□□ -0.77
PDGFRA-206ENST00000508170 WWC1Q8IX03 1113 aa10.21□□□□□ -0.78
PDGFRA-206ENST00000508170 PCMTD1Q96MG8 357 aaPredicted RBP10.21□□□□□ -0.78
PDGFRA-206ENST00000508170 COG6Q9Y2V7 657 aa10.21□□□□□ -0.78
PDGFRA-206ENST00000508170 ZFP91-CNTFA0A0A6YYC7 529 aaPredicted RBP10.19□□□□□ -0.78
PDGFRA-206ENST00000508170 PEX14O75381 377 aa10.19□□□□□ -0.78
PDGFRA-206ENST00000508170 NME8Q8N427 588 aa10.18□□□□□ -0.78
PDGFRA-206ENST00000508170 CLSPNQ9HAW4 1339 aa10.18□□□□□ -0.78
PDGFRA-206ENST00000508170 ZC3H6P61129 1189 aaKnown RBP10.18□□□□□ -0.78
PDGFRA-206ENST00000508170 ZNF16P17020 682 aaPredicted RBP10.17□□□□□ -0.78
PDGFRA-206ENST00000508170 MCCD1P59942 119 aaPredicted RBP10.17□□□□□ -0.78
PDGFRA-206ENST00000508170 CDCA7Q9BWT1 371 aaPredicted RBP10.17□□□□□ -0.78
PDGFRA-206ENST00000508170 MORC4Q8TE76 937 aa10.17□□□□□ -0.78
PDGFRA-206ENST00000508170 KLHL42Q9P2K6 505 aa10.17□□□□□ -0.78
PDGFRA-206ENST00000508170 MAP4K4O95819 1239 aaPredicted RBP10.16□□□□□ -0.78
PDGFRA-206ENST00000508170 EVI5LQ96CN4 794 aa10.15□□□□□ -0.78
PDGFRA-206ENST00000508170 ZBTB47Q9UFB7 747 aaPredicted RBP10.15□□□□□ -0.78
PDGFRA-206ENST00000508170 GSE1Q14687 1217 aa10.15□□□□□ -0.78
PDGFRA-206ENST00000508170 PBXIP1Q96AQ6 731 aa10.15□□□□□ -0.78
PDGFRA-206ENST00000508170 GPATCH3Q96I76 525 aa10.14□□□□□ -0.79
PDGFRA-206ENST00000508170 TBC1D12O60347 775 aa10.14□□□□□ -0.79
PDGFRA-206ENST00000508170 CSB-PGBD3P0DP91 1061 aa10.14□□□□□ -0.79
PDGFRA-206ENST00000508170 BCLAF1Q9NYF8 920 aaKnown RBP eCLIP10.14□□□□□ -0.79
PDGFRA-206ENST00000508170 NEFMP07197 916 aa10.13□□□□□ -0.79
PDGFRA-206ENST00000508170 RBM46Q8TBY0 533 aaKnown RBP10.13□□□□□ -0.79
PDGFRA-206ENST00000508170 SECISBP2LQ93073 1101 aaKnown RBP10.13□□□□□ -0.79
PDGFRA-206ENST00000508170 CALR3Q96L12 384 aaKnown RBP10.13□□□□□ -0.79
PDGFRA-206ENST00000508170 TRBV21OR9-2A0A075B6F4 123 aaPredicted RBP10.13□□□□□ -0.79
PDGFRA-206ENST00000508170 SF3A1Q15459 793 aaKnown RBP10.13□□□□□ -0.79
PDGFRA-206ENST00000508170 NAALADL2Q58DX5 795 aa10.13□□□□□ -0.79
PDGFRA-206ENST00000508170 DPH6Q7L8W6 267 aa10.13□□□□□ -0.79
PDGFRA-206ENST00000508170 U3KPZ7 1027 aaPredicted RBP10.12□□□□□ -0.79
PDGFRA-206ENST00000508170 PTMAP06454 111 aaKnown RBP10.11□□□□□ -0.79
PDGFRA-206ENST00000508170 MLLT3P42568 568 aaPredicted RBP10.11□□□□□ -0.79
PDGFRA-206ENST00000508170 SGIP1Q9BQI5 828 aa10.11□□□□□ -0.79
PDGFRA-206ENST00000508170 PPFIA4O75335 1185 aa10.11□□□□□ -0.79
PDGFRA-206ENST00000508170 DNAJC14Q6Y2X3 702 aaPredicted RBP10.11□□□□□ -0.79
PDGFRA-206ENST00000508170 PABPN1Q86U42 306 aaKnown RBP eCLIP10.11□□□□□ -0.79
PDGFRA-206ENST00000508170 VTI1AQ96AJ9 217 aa10.11□□□□□ -0.79
PDGFRA-206ENST00000508170 KCNG1Q9UIX4 513 aa10.11□□□□□ -0.79
PDGFRA-206ENST00000508170 WDR3Q9UNX4 943 aaKnown RBP eCLIP10.11□□□□□ -0.79
PDGFRA-206ENST00000508170 AMHR2Q16671 573 aa10.1□□□□□ -0.79
PDGFRA-206ENST00000508170 UBA5Q9GZZ9 404 aa10.1□□□□□ -0.79
PDGFRA-206ENST00000508170 ERCC3P19447 782 aa10.09□□□□□ -0.79
PDGFRA-206ENST00000508170 CCDC181Q5TID7 509 aa10.09□□□□□ -0.79
PDGFRA-206ENST00000508170 PARNO95453 639 aaKnown RBP10.08□□□□□ -0.8
PDGFRA-206ENST00000508170 METTL14Q9HCE5 456 aaKnown RBP10.08□□□□□ -0.8
PDGFRA-206ENST00000508170 SBNO2Q9Y2G9 1366 aa10.07□□□□□ -0.8
PDGFRA-206ENST00000508170 SMC5Q8IY18 1101 aa10.07□□□□□ -0.8
PDGFRA-206ENST00000508170 GLMNQ92990 594 aa10.07□□□□□ -0.8
PDGFRA-206ENST00000508170 NAP1L2Q9ULW6 460 aaPredicted RBP10.07□□□□□ -0.8
PDGFRA-206ENST00000508170 LONRF3Q496Y0 759 aa10.07□□□□□ -0.8
PDGFRA-206ENST00000508170 CCDC102AQ96A19 550 aa10.07□□□□□ -0.8
PDGFRA-206ENST00000508170 BCL2L13Q9BXK5 485 aa10.06□□□□□ -0.8
PDGFRA-206ENST00000508170 MAGEC2Q9UBF1 373 aaPredicted RBP10.06□□□□□ -0.8
PDGFRA-206ENST00000508170 CREB3O43889 395 aa10.06□□□□□ -0.8
PDGFRA-206ENST00000508170 FOXD4Q12950 439 aaPredicted RBP10.06□□□□□ -0.8
PDGFRA-206ENST00000508170 HMGB1P1B2RPK0 211 aaPredicted RBP10.05□□□□□ -0.8
PDGFRA-206ENST00000508170 DMRT2Q9Y5R5 561 aa10.05□□□□□ -0.8
PDGFRA-206ENST00000508170 CCDC194A0A1B0GVG4 234 aa10.05□□□□□ -0.8
PDGFRA-206ENST00000508170 RFX1P22670 979 aa10.05□□□□□ -0.8
PDGFRA-206ENST00000508170 NOM1Q5C9Z4 860 aaKnown RBP10.05□□□□□ -0.8
PDGFRA-206ENST00000508170 LARGE2Q8N3Y3 721 aa10.05□□□□□ -0.8
PDGFRA-206ENST00000508170 GIPC2Q8TF65 315 aa10.05□□□□□ -0.8
PDGFRA-206ENST00000508170 VRTNQ9H8Y1 702 aa10.05□□□□□ -0.8
PDGFRA-206ENST00000508170 GNEQ9Y223 722 aaKnown RBP10.05□□□□□ -0.8
PDGFRA-206ENST00000508170 SPDYE2BA6NHP3 402 aa10.04□□□□□ -0.8
PDGFRA-206ENST00000508170 SPDYE5A6NIY4 337 aa10.04□□□□□ -0.8
PDGFRA-206ENST00000508170 GPR37O15354 613 aa10.04□□□□□ -0.8
PDGFRA-206ENST00000508170 SPDYE6P0CI01 402 aa10.04□□□□□ -0.8
PDGFRA-206ENST00000508170 SPDYE2Q495Y8 402 aa10.04□□□□□ -0.8
PDGFRA-206ENST00000508170 RPS6KL1Q9Y6S9 549 aa10.03□□□□□ -0.8
PDGFRA-206ENST00000508170 PMM1Q92871 262 aa10.03□□□□□ -0.8
PDGFRA-206ENST00000508170 POM121CA8CG34 1229 aa10.02□□□□□ -0.81
PDGFRA-206ENST00000508170 TMA7Q9Y2S6 64 aaKnown RBP10.02□□□□□ -0.81
PDGFRA-206ENST00000508170 SRPK2P78362 688 aaKnown RBP10.02□□□□□ -0.81
PDGFRA-206ENST00000508170 PSME1Q06323 249 aa10.02□□□□□ -0.81
PDGFRA-206ENST00000508170 SH3D19Q5HYK7 790 aa10.02□□□□□ -0.81
PDGFRA-206ENST00000508170 MTA3Q9BTC8 594 aa10.02□□□□□ -0.81
PDGFRA-206ENST00000508170 TBC1D2Q9BYX2 928 aa10.02□□□□□ -0.81
PDGFRA-206ENST00000508170 MS4A1P11836 297 aa10.01□□□□□ -0.81
PDGFRA-206ENST00000508170 PAX3P23760 479 aa10.01□□□□□ -0.81
PDGFRA-206ENST00000508170 ZFYVE27Q5T4F4 411 aa10.01□□□□□ -0.81
Retrieved 100 of 20,778 RNA–protein pairs in 11.5 ms