RNA–Protein interactions for RNA: ENST00000508126.1

SPSB4-203, Transcript of splA/ryanodine receptor domain and SOCS box containing 4, humanhuman

TSL 2

Gene SPSB4, Length 1,752 nt, Biotype nonsense mediated decay.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SPSB4-203ENST00000508126 FOXD1Q16676 465 aa23.52■■□□□ 1.36
SPSB4-203ENST00000508126 IQGAP3Q86VI3 1631 aa23.52■■□□□ 1.36
SPSB4-203ENST00000508126 DNAJC5Q9H3Z4 198 aa23.51■■□□□ 1.35
SPSB4-203ENST00000508126 A2MP01023 1474 aa23.51■■□□□ 1.35
SPSB4-203ENST00000508126 TONSLQ96HA7 1378 aa23.51■■□□□ 1.35
SPSB4-203ENST00000508126 GRWD1Q9BQ67 446 aaKnown RBP eCLIP23.5■■□□□ 1.35
SPSB4-203ENST00000508126 FRMPD1Q5SYB0 1578 aa23.49■■□□□ 1.35
SPSB4-203ENST00000508126 DEPDC5O75140 1603 aa23.49■■□□□ 1.35
SPSB4-203ENST00000508126 ABCA6Q8N139 1617 aa23.49■■□□□ 1.35
SPSB4-203ENST00000508126 ZMYM4Q5VZL5 1548 aa23.48■■□□□ 1.35
SPSB4-203ENST00000508126 DIP2CQ9Y2E4 1556 aa23.45■■□□□ 1.34
SPSB4-203ENST00000508126 RPRD2Q5VT52 1461 aaKnown RBP23.44■■□□□ 1.34
SPSB4-203ENST00000508126 KANK1Q14678 1352 aa23.44■■□□□ 1.34
SPSB4-203ENST00000508126 KIF3BO15066 747 aa23.44■■□□□ 1.34
SPSB4-203ENST00000508126 PRDM15P57071 1507 aaPredicted RBP23.43■■□□□ 1.34
SPSB4-203ENST00000508126 RNF17Q9BXT8 1623 aaKnown RBP23.4■■□□□ 1.34
SPSB4-203ENST00000508126 BCORL1Q5H9F3 1711 aa23.39■■□□□ 1.34
SPSB4-203ENST00000508126 VWDEQ8N2E2 1590 aa23.39■■□□□ 1.33
SPSB4-203ENST00000508126 YEATS2Q9ULM3 1422 aa23.38■■□□□ 1.33
SPSB4-203ENST00000508126 MROH1Q8NDA8 1641 aa23.38■■□□□ 1.33
SPSB4-203ENST00000508126 PPP1R15AO75807 674 aaPredicted RBP23.36■■□□□ 1.33
SPSB4-203ENST00000508126 TET3O43151 1660 aa23.35■■□□□ 1.33
SPSB4-203ENST00000508126 COL17A1Q9UMD9 1497 aaPredicted RBP23.32■■□□□ 1.32
SPSB4-203ENST00000508126 ATP10AO60312 1499 aa23.32■■□□□ 1.32
SPSB4-203ENST00000508126 TRHP20396 242 aaPredicted RBP23.31■■□□□ 1.32
SPSB4-203ENST00000508126 CCDC144AA2RUR9 1427 aa23.3■■□□□ 1.32
SPSB4-203ENST00000508126 LMTK2Q8IWU2 1503 aa23.3■■□□□ 1.32
SPSB4-203ENST00000508126 REREQ9P2R6 1566 aa23.29■■□□□ 1.32
SPSB4-203ENST00000508126 E9PCH4 1651 aa23.29■■□□□ 1.32
SPSB4-203ENST00000508126 L3MBTL2Q969R5 705 aa23.28■■□□□ 1.32
SPSB4-203ENST00000508126 ARHGEF40Q8TER5 1519 aa23.28■■□□□ 1.32
SPSB4-203ENST00000508126 ZNF316A6NFI3 1004 aaPredicted RBP23.27■■□□□ 1.32
SPSB4-203ENST00000508126 PLA2R1Q13018 1463 aa23.27■■□□□ 1.32
SPSB4-203ENST00000508126 GGT6Q6P531 493 aa23.27■■□□□ 1.32
SPSB4-203ENST00000508126 EFCAB6Q5THR3 1501 aa23.27■■□□□ 1.31
SPSB4-203ENST00000508126 CEP152O94986 1710 aa23.23■■□□□ 1.31
SPSB4-203ENST00000508126 ABCC3O15438 1527 aa23.22■■□□□ 1.31
SPSB4-203ENST00000508126 TRPM2O94759 1503 aa23.22■■□□□ 1.31
SPSB4-203ENST00000508126 AGLP35573 1532 aa23.22■■□□□ 1.31
SPSB4-203ENST00000508126 SPHKAPQ2M3C7 1700 aa23.22■■□□□ 1.31
SPSB4-203ENST00000508126 PTPRTO14522 1441 aa23.21■■□□□ 1.31
SPSB4-203ENST00000508126 WASHC2CQ9Y4E1 1318 aa23.2■■□□□ 1.31
SPSB4-203ENST00000508126 ZC3H13Q5T200 1668 aaKnown RBP23.2■■□□□ 1.3
SPSB4-203ENST00000508126 CAMSAP1Q5T5Y3 1602 aa23.16■■□□□ 1.3
SPSB4-203ENST00000508126 NPATQ14207 1427 aa23.14■■□□□ 1.29
SPSB4-203ENST00000508126 PPP6R1Q9UPN7 881 aa23.12■■□□□ 1.29
SPSB4-203ENST00000508126 CLTCL1P53675 1640 aa23.11■■□□□ 1.29
SPSB4-203ENST00000508126 ARHGAP31Q2M1Z3 1444 aa23.1■■□□□ 1.29
SPSB4-203ENST00000508126 UHRF1BP1Q6BDS2 1440 aa23.09■■□□□ 1.29
SPSB4-203ENST00000508126 CNTLNQ9NXG0 1405 aa23.09■■□□□ 1.29
SPSB4-203ENST00000508126 SIGLEC1Q9BZZ2 1709 aa23.08■■□□□ 1.29
SPSB4-203ENST00000508126 SPATA31E1Q6ZUB1 1445 aa23.07■■□□□ 1.28
SPSB4-203ENST00000508126 NBPF8Q3BBV2 869 aa23.07■■□□□ 1.28
SPSB4-203ENST00000508126 DCAF11Q8TEB1 546 aa23.07■■□□□ 1.28
SPSB4-203ENST00000508126 RGL3Q3MIN7 710 aa23.06■■□□□ 1.28
SPSB4-203ENST00000508126 NEURL4Q96JN8 1562 aa23.06■■□□□ 1.28
SPSB4-203ENST00000508126 ZNF326Q5BKZ1 582 aaKnown RBP23.04■■□□□ 1.28
SPSB4-203ENST00000508126 KDM2AQ9Y2K7 1162 aa23.03■■□□□ 1.28
SPSB4-203ENST00000508126 NOS1P29475 1434 aa23.03■■□□□ 1.28
SPSB4-203ENST00000508126 UGGT1Q9NYU2 1555 aa23.03■■□□□ 1.28
SPSB4-203ENST00000508126 RALGAPBQ86X10 1494 aa23■■□□□ 1.27
SPSB4-203ENST00000508126 ARID4BQ4LE39 1312 aaPredicted RBP23■■□□□ 1.27
SPSB4-203ENST00000508126 DIEXFQ68CQ4 756 aaKnown RBP23■■□□□ 1.27
SPSB4-203ENST00000508126 KIF1BO60333 1816 aa23■■□□□ 1.27
SPSB4-203ENST00000508126 MLECQ14165 292 aa22.99■■□□□ 1.27
SPSB4-203ENST00000508126 PRAG1Q86YV5 1406 aa22.99■■□□□ 1.27
SPSB4-203ENST00000508126 CLTCQ00610 1675 aaKnown RBP22.99■■□□□ 1.27
SPSB4-203ENST00000508126 CFAP65Q6ZU64 1925 aaKnown RBP22.98■■□□□ 1.27
SPSB4-203ENST00000508126 EIF4G2P78344 907 aaKnown RBP eCLIP22.97■■□□□ 1.27
SPSB4-203ENST00000508126 STAC3Q96MF2 364 aa22.97■■□□□ 1.27
SPSB4-203ENST00000508126 ESF1Q9H501 851 aaKnown RBP22.96■■□□□ 1.27
SPSB4-203ENST00000508126 SYNMO15061 1565 aa22.96■■□□□ 1.27
SPSB4-203ENST00000508126 ADGRB3O60242 1522 aa22.96■■□□□ 1.27
SPSB4-203ENST00000508126 PREX1Q8TCU6 1659 aa22.96■■□□□ 1.27
SPSB4-203ENST00000508126 PIK3C2BO00750 1634 aa22.94■■□□□ 1.26
SPSB4-203ENST00000508126 ERVK-7P63135 1459 aa22.93■■□□□ 1.26
SPSB4-203ENST00000508126 MROH2AA6NES4 1674 aa22.92■■□□□ 1.26
SPSB4-203ENST00000508126 HSPA5P11021 654 aaKnown RBP22.91■■□□□ 1.26
SPSB4-203ENST00000508126 SLC52A1Q9NWF4 448 aa22.91■■□□□ 1.26
SPSB4-203ENST00000508126 TRPM1Q7Z4N2 1603 aa22.91■■□□□ 1.26
SPSB4-203ENST00000508126 HIRIP3Q9BW71 556 aaPredicted RBP22.9■■□□□ 1.26
SPSB4-203ENST00000508126 ROCK2O75116 1388 aaKnown RBP22.89■■□□□ 1.26
SPSB4-203ENST00000508126 MYOM2P54296 1465 aa22.89■■□□□ 1.25
SPSB4-203ENST00000508126 CHGAP10645 457 aaKnown RBP22.89■■□□□ 1.25
SPSB4-203ENST00000508126 MADDQ8WXG6 1647 aa22.88■■□□□ 1.25
SPSB4-203ENST00000508126 CARD11Q9BXL7 1154 aa22.87■■□□□ 1.25
SPSB4-203ENST00000508126 SPATA31D1Q6ZQQ2 1576 aa22.87■■□□□ 1.25
SPSB4-203ENST00000508126 USP47Q96K76 1375 aa22.87■■□□□ 1.25
SPSB4-203ENST00000508126 FBXO31Q5XUX0 539 aaPredicted RBP22.86■■□□□ 1.25
SPSB4-203ENST00000508126 IFT172Q9UG01 1749 aa22.86■■□□□ 1.25
SPSB4-203ENST00000508126 ZMYM3Q14202 1370 aa22.85■■□□□ 1.25
SPSB4-203ENST00000508126 GPRASP1Q5JY77 1395 aa22.85■■□□□ 1.25
SPSB4-203ENST00000508126 RPGRIP1LQ68CZ1 1315 aa22.84■■□□□ 1.25
SPSB4-203ENST00000508126 IDI1Q13907 227 aa22.84■■□□□ 1.25
SPSB4-203ENST00000508126 LAMC1P11047 1609 aa22.83■■□□□ 1.24
SPSB4-203ENST00000508126 PPLO60437 1756 aa22.8■■□□□ 1.24
SPSB4-203ENST00000508126 NRXN1Q9ULB1 1477 aa22.79■■□□□ 1.24
SPSB4-203ENST00000508126 TMEM131LA2VDJ0 1609 aa22.78■■□□□ 1.24
SPSB4-203ENST00000508126 KIAA1210Q9ULL0 1709 aa22.78■■□□□ 1.24
SPSB4-203ENST00000508126 NBPF1Q3BBV0 1214 aa22.77■■□□□ 1.24
Retrieved 100 of 20,778 RNA–protein pairs in 27.6 ms