RNA–Protein interactions for RNA: ENST00000507816.5

SEC31A-223, Transcript of SEC31 homolog A, COPII coat complex component, human

TSL 4

Gene SEC31A, Length 546 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
SEC31A-223	ENST00000507816	KDM5D	Q9BY66	1539 aa		32.2	■■■□□ 2.74
SEC31A-223	ENST00000507816	TNR	Q92752	1358 aa		32.19	■■■□□ 2.74
SEC31A-223	ENST00000507816	PZP	P20742	1482 aa		32.19	■■■□□ 2.74
SEC31A-223	ENST00000507816	CCDC141	Q6ZP82	1450 aa		32.18	■■■□□ 2.74
SEC31A-223	ENST00000507816	NEURL4	Q96JN8	1562 aa		32.18	■■■□□ 2.74
SEC31A-223	ENST00000507816	CPS1	P31327	1500 aa		32.17	■■■□□ 2.74
SEC31A-223	ENST00000507816	POLR1A	O95602	1720 aa	Predicted RBP	32.16	■■■□□ 2.74
SEC31A-223	ENST00000507816	KIF3B	O15066	747 aa		32.13	■■■□□ 2.73
SEC31A-223	ENST00000507816	FBXO31	Q5XUX0	539 aa	Predicted RBP	32.13	■■■□□ 2.73
SEC31A-223	ENST00000507816	CAMSAP2	Q08AD1	1489 aa		32.11	■■■□□ 2.73
SEC31A-223	ENST00000507816	SHANK2	Q9UPX8	1470 aa		32.11	■■■□□ 2.73
SEC31A-223	ENST00000507816	NCOA2	Q15596	1464 aa		32.08	■■■□□ 2.73
SEC31A-223	ENST00000507816	NLRP1	Q9C000	1473 aa		32.08	■■■□□ 2.73
SEC31A-223	ENST00000507816	WASHC2C	Q9Y4E1	1318 aa		32.07	■■■□□ 2.72
SEC31A-223	ENST00000507816	RSPH4A	Q5TD94	716 aa		32.07	■■■□□ 2.72
SEC31A-223	ENST00000507816	TOM1	O60784	492 aa		32.06	■■■□□ 2.72
SEC31A-223	ENST00000507816	SCAF1	Q9H7N4	1312 aa	Known RBP	32.05	■■■□□ 2.72
SEC31A-223	ENST00000507816	HSPA1L	P34931	641 aa		32.05	■■■□□ 2.72
SEC31A-223	ENST00000507816	MIA2	Q96PC5	1412 aa		32.05	■■■□□ 2.72
SEC31A-223	ENST00000507816	DROSHA	Q9NRR4	1374 aa	Known RBP eCLIP	32.05	■■■□□ 2.72
SEC31A-223	ENST00000507816	ANKLE2	Q86XL3	938 aa		32.04	■■■□□ 2.72
SEC31A-223	ENST00000507816	MED1	Q15648	1581 aa	Predicted RBP	32.03	■■■□□ 2.72
SEC31A-223	ENST00000507816	VWDE	Q8N2E2	1590 aa		32.03	■■■□□ 2.72
SEC31A-223	ENST00000507816	PIP4K2B	P78356	416 aa		32.03	■■■□□ 2.72
SEC31A-223	ENST00000507816	THEMIS	Q8N1K5	641 aa	Predicted RBP	32.02	■■■□□ 2.72
SEC31A-223	ENST00000507816	MED14	O60244	1454 aa		32.02	■■■□□ 2.72
SEC31A-223	ENST00000507816	UGGT1	Q9NYU2	1555 aa		32.02	■■■□□ 2.72
SEC31A-223	ENST00000507816	ARHGEF5	Q12774	1597 aa		32.01	■■■□□ 2.71
SEC31A-223	ENST00000507816	DEPDC5	O75140	1603 aa		32	■■■□□ 2.71
SEC31A-223	ENST00000507816	NPHP4	O75161	1426 aa	Predicted RBP	32	■■■□□ 2.71
SEC31A-223	ENST00000507816	RNF17	Q9BXT8	1623 aa	Known RBP	31.93	■■■□□ 2.7
SEC31A-223	ENST00000507816	TSPY4	P0CV99	314 aa		31.92	■■■□□ 2.7
SEC31A-223	ENST00000507816	TSPY10	P0CW01	314 aa		31.92	■■■□□ 2.7
SEC31A-223	ENST00000507816	ABCC3	O15438	1527 aa		31.91	■■■□□ 2.7
SEC31A-223	ENST00000507816	ALK	Q9UM73	1620 aa		31.91	■■■□□ 2.7
SEC31A-223	ENST00000507816	IQGAP1	P46940	1657 aa		31.9	■■■□□ 2.7
SEC31A-223	ENST00000507816	ZC3H13	Q5T200	1668 aa	Known RBP	31.89	■■■□□ 2.7
SEC31A-223	ENST00000507816	MAST1	Q9Y2H9	1570 aa		31.87	■■■□□ 2.69
SEC31A-223	ENST00000507816	ERVK-7	P63135	1459 aa		31.84	■■■□□ 2.69
SEC31A-223	ENST00000507816	EIF2AK4	Q9P2K8	1649 aa	Known RBP	31.84	■■■□□ 2.69
SEC31A-223	ENST00000507816	SYNM	O15061	1565 aa		31.83	■■■□□ 2.69
SEC31A-223	ENST00000507816	LRRC7	Q96NW7	1537 aa		31.81	■■■□□ 2.68
SEC31A-223	ENST00000507816	LRRC9	Q6ZRR7	1453 aa		31.8	■■■□□ 2.68
SEC31A-223	ENST00000507816	MROH1	Q8NDA8	1641 aa		31.79	■■■□□ 2.68
SEC31A-223	ENST00000507816	STRCP1	A6NGW2	1772 aa		31.77	■■■□□ 2.68
SEC31A-223	ENST00000507816	PHF23	Q9BUL5	403 aa	Predicted RBP	31.76	■■■□□ 2.67
SEC31A-223	ENST00000507816	SCAF11	Q99590	1463 aa	Known RBP	31.72	■■■□□ 2.67
SEC31A-223	ENST00000507816	VPS8	Q8N3P4	1428 aa		31.72	■■■□□ 2.67
SEC31A-223	ENST00000507816	UBR1	Q8IWV7	1749 aa		31.72	■■■□□ 2.67
SEC31A-223	ENST00000507816	DUOX2	Q9NRD8	1548 aa		31.7	■■■□□ 2.66
SEC31A-223	ENST00000507816	ARHGAP23	Q9P227	1491 aa		31.68	■■■□□ 2.66
SEC31A-223	ENST00000507816	CEP152	O94986	1710 aa		31.68	■■■□□ 2.66
SEC31A-223	ENST00000507816	MYOM3	Q5VTT5	1437 aa		31.67	■■■□□ 2.66
SEC31A-223	ENST00000507816	SLIT1	O75093	1534 aa		31.67	■■■□□ 2.66
SEC31A-223	ENST00000507816	ARHGAP31	Q2M1Z3	1444 aa		31.66	■■■□□ 2.66
SEC31A-223	ENST00000507816	PRDM15	P57071	1507 aa	Predicted RBP	31.65	■■■□□ 2.66
SEC31A-223	ENST00000507816	MAP3K1	Q13233	1512 aa		31.65	■■■□□ 2.66
SEC31A-223	ENST00000507816	LTK	P29376	864 aa		31.61	■■■□□ 2.65
SEC31A-223	ENST00000507816	SENP3	Q9H4L4	574 aa	Predicted RBP	31.61	■■■□□ 2.65
SEC31A-223	ENST00000507816	ERBIN	Q96RT1	1412 aa		31.6	■■■□□ 2.65
SEC31A-223	ENST00000507816	KIF15	Q9NS87	1388 aa		31.59	■■■□□ 2.65
SEC31A-223	ENST00000507816	KANK4	Q5T7N3	995 aa	Predicted RBP	31.59	■■■□□ 2.65
SEC31A-223	ENST00000507816	TXNDC2	Q86VQ3	553 aa		31.59	■■■□□ 2.65
SEC31A-223	ENST00000507816	EID1	Q9Y6B2	187 aa		31.54	■■■□□ 2.64
SEC31A-223	ENST00000507816	TMEM2	Q9UHN6	1383 aa		31.52	■■■□□ 2.64
SEC31A-223	ENST00000507816	CROCC2	H7BZ55	1655 aa		31.51	■■■□□ 2.64
SEC31A-223	ENST00000507816	PIK3C2B	O00750	1634 aa		31.51	■■■□□ 2.63
SEC31A-223	ENST00000507816	ABCC5	O15440	1437 aa		31.5	■■■□□ 2.63
SEC31A-223	ENST00000507816	XIRP1	Q702N8	1843 aa	Known RBP	31.49	■■■□□ 2.63
SEC31A-223	ENST00000507816	CFAP65	Q6ZU64	1925 aa	Known RBP	31.49	■■■□□ 2.63
SEC31A-223	ENST00000507816	FAM135B	Q49AJ0	1406 aa		31.47	■■■□□ 2.63
SEC31A-223	ENST00000507816	RRP7BP	Q9NSQ0	103 aa		31.46	■■■□□ 2.63
SEC31A-223	ENST00000507816	KANK1	Q14678	1352 aa		31.45	■■■□□ 2.63
SEC31A-223	ENST00000507816	EFCAB6	Q5THR3	1501 aa		31.45	■■■□□ 2.63
SEC31A-223	ENST00000507816	KDM5A	P29375	1690 aa	Known RBP	31.45	■■■□□ 2.63
SEC31A-223	ENST00000507816	RGS17	Q9UGC6	210 aa	Predicted RBP	31.45	■■■□□ 2.63
SEC31A-223	ENST00000507816	LMTK2	Q8IWU2	1503 aa		31.44	■■■□□ 2.62
SEC31A-223	ENST00000507816	GRWD1	Q9BQ67	446 aa	Known RBP eCLIP	31.43	■■■□□ 2.62	4e-9	■■■□□ 15.8
SEC31A-223	ENST00000507816	PTPN23	Q9H3S7	1636 aa		31.42	■■■□□ 2.62
SEC31A-223	ENST00000507816	DAPK1	P53355	1430 aa		31.42	■■■□□ 2.62
SEC31A-223	ENST00000507816	STAG3	Q9UJ98	1225 aa		31.42	■■■□□ 2.62
SEC31A-223	ENST00000507816	TMEM94	Q12767	1356 aa		31.42	■■■□□ 2.62
SEC31A-223	ENST00000507816	KCNA6	P17658	529 aa		31.37	■■■□□ 2.61
SEC31A-223	ENST00000507816	TET3	O43151	1660 aa		31.36	■■■□□ 2.61
SEC31A-223	ENST00000507816	LOC105371045	A0A1W2PR82	267 aa		31.36	■■■□□ 2.61
SEC31A-223	ENST00000507816	IDI1	Q13907	227 aa		31.36	■■■□□ 2.61
SEC31A-223	ENST00000507816	ADGRB3	O60242	1522 aa		31.34	■■■□□ 2.61
SEC31A-223	ENST00000507816	NKTR	P30414	1462 aa	Known RBP	31.33	■■■□□ 2.61
SEC31A-223	ENST00000507816	NOS1	P29475	1434 aa		31.33	■■■□□ 2.61
SEC31A-223	ENST00000507816	FGD6	Q6ZV73	1430 aa		31.33	■■■□□ 2.61
SEC31A-223	ENST00000507816	ANKRD30A	Q9BXX3	1397 aa		31.33	■■■□□ 2.61
SEC31A-223	ENST00000507816	NWD1	Q149M9	1564 aa		31.32	■■■□□ 2.6
SEC31A-223	ENST00000507816	ROBO1	Q9Y6N7	1651 aa		31.32	■■■□□ 2.6
SEC31A-223	ENST00000507816	SLC26A8	Q96RN1	970 aa		31.3	■■■□□ 2.6
SEC31A-223	ENST00000507816	PROSER2	Q86WR7	435 aa	Predicted RBP	31.28	■■■□□ 2.6
SEC31A-223	ENST00000507816	APLP2	Q06481	763 aa		31.24	■■■□□ 2.59
SEC31A-223	ENST00000507816	POTEA	Q6S8J7	498 aa		31.24	■■■□□ 2.59
SEC31A-223	ENST00000507816	SLC52A1	Q9NWF4	448 aa		31.24	■■■□□ 2.59
SEC31A-223	ENST00000507816	RBM33	Q96EV2	1170 aa	Known RBP	31.23	■■■□□ 2.59
SEC31A-223	ENST00000507816	CHIC2	Q9UKJ5	165 aa		31.23	■■■□□ 2.59

Retrieved 100 of 20,778 RNA–protein pairs in 7.5 ms