RNA–Protein interactions for RNA: ENST00000507771.5

ITGA3-210, Transcript of integrin subunit alpha 3, humanhuman

TSL 3

Gene ITGA3, Length 399 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ITGA3-210ENST00000507771 SIGLEC1Q9BZZ2 1709 aa16.61■□□□□ 0.25
ITGA3-210ENST00000507771 GRWD1Q9BQ67 446 aaKnown RBP eCLIP16.6■□□□□ 0.25
ITGA3-210ENST00000507771 SETD5Q9C0A6 1442 aa16.6■□□□□ 0.25
ITGA3-210ENST00000507771 WASHC2CQ9Y4E1 1318 aa16.59■□□□□ 0.25
ITGA3-210ENST00000507771 RNF17Q9BXT8 1623 aaKnown RBP16.59■□□□□ 0.25
ITGA3-210ENST00000507771 CNTLNQ9NXG0 1405 aa16.58■□□□□ 0.24
ITGA3-210ENST00000507771 FAM135AQ9P2D6 1515 aa16.58■□□□□ 0.24
ITGA3-210ENST00000507771 TRIM52Q96A61 297 aa16.55■□□□□ 0.24
ITGA3-210ENST00000507771 FER1L4A9Z1Z3 1794 aa16.55■□□□□ 0.24
ITGA3-210ENST00000507771 ADAMTSL3P82987 1691 aa16.55■□□□□ 0.24
ITGA3-210ENST00000507771 DEPDC5O75140 1603 aa16.55■□□□□ 0.24
ITGA3-210ENST00000507771 PRDM15P57071 1507 aaPredicted RBP16.55■□□□□ 0.24
ITGA3-210ENST00000507771 KDM5DQ9BY66 1539 aa16.55■□□□□ 0.24
ITGA3-210ENST00000507771 NUP155O75694 1391 aa16.53■□□□□ 0.24
ITGA3-210ENST00000507771 MADDQ8WXG6 1647 aa16.53■□□□□ 0.24
ITGA3-210ENST00000507771 UNC13BO14795 1591 aa16.53■□□□□ 0.24
ITGA3-210ENST00000507771 ZC3H13Q5T200 1668 aaKnown RBP16.53■□□□□ 0.24
ITGA3-210ENST00000507771 RAB3GAP2Q9H2M9 1393 aa16.52■□□□□ 0.24
ITGA3-210ENST00000507771 KDM4FA0A1W2PPD8 638 aa16.51■□□□□ 0.23
ITGA3-210ENST00000507771 HRCP23327 699 aa16.51■□□□□ 0.23
ITGA3-210ENST00000507771 PCGF6Q9BYE7 350 aa16.51■□□□□ 0.23
ITGA3-210ENST00000507771 MROH1Q8NDA8 1641 aa16.51■□□□□ 0.23
ITGA3-210ENST00000507771 CLTCQ00610 1675 aaKnown RBP16.5■□□□□ 0.23
ITGA3-210ENST00000507771 RIMS1Q86UR5 1692 aaKnown RBP16.5■□□□□ 0.23
ITGA3-210ENST00000507771 ABCC3O15438 1527 aa16.5■□□□□ 0.23
ITGA3-210ENST00000507771 MROH2AA6NES4 1674 aa16.48■□□□□ 0.23
ITGA3-210ENST00000507771 ZMYM3Q14202 1370 aa16.48■□□□□ 0.23
ITGA3-210ENST00000507771 LMTK2Q8IWU2 1503 aa16.47■□□□□ 0.23
ITGA3-210ENST00000507771 PLPPR3Q6T4P5 718 aa16.47■□□□□ 0.23
ITGA3-210ENST00000507771 IQGAP3Q86VI3 1631 aa16.47■□□□□ 0.23
ITGA3-210ENST00000507771 PTPRMP28827 1452 aa16.47■□□□□ 0.23
ITGA3-210ENST00000507771 VWDEQ8N2E2 1590 aa16.47■□□□□ 0.23
ITGA3-210ENST00000507771 CEP152O94986 1710 aa16.46■□□□□ 0.23
ITGA3-210ENST00000507771 SLC4A1APQ9BWU0 796 aaKnown RBP16.45■□□□□ 0.22
ITGA3-210ENST00000507771 CAMSAP1Q5T5Y3 1602 aa16.45■□□□□ 0.22
ITGA3-210ENST00000507771 ARHGAP31Q2M1Z3 1444 aa16.44■□□□□ 0.22
ITGA3-210ENST00000507771 TET3O43151 1660 aa16.43■□□□□ 0.22
ITGA3-210ENST00000507771 PZPP20742 1482 aa16.42■□□□□ 0.22
ITGA3-210ENST00000507771 EFCAB6Q5THR3 1501 aa16.42■□□□□ 0.22
ITGA3-210ENST00000507771 CEBPAP49715 358 aaPredicted RBP16.42■□□□□ 0.22
ITGA3-210ENST00000507771 C3P01024 1663 aa16.41■□□□□ 0.22
ITGA3-210ENST00000507771 AEBP2Q6ZN18 517 aaPredicted RBP16.41■□□□□ 0.22
ITGA3-210ENST00000507771 RPRD2Q5VT52 1461 aaKnown RBP16.41■□□□□ 0.22
ITGA3-210ENST00000507771 MPHOSPH9Q99550 1183 aa16.4■□□□□ 0.22
ITGA3-210ENST00000507771 NPATQ14207 1427 aa16.39■□□□□ 0.21
ITGA3-210ENST00000507771 PKD2Q13563 968 aa16.39■□□□□ 0.21
ITGA3-210ENST00000507771 FBXO31Q5XUX0 539 aaPredicted RBP16.37■□□□□ 0.21
ITGA3-210ENST00000507771 TNRQ92752 1358 aa16.36■□□□□ 0.21
ITGA3-210ENST00000507771 ERVK-7P63135 1459 aa16.35■□□□□ 0.21
ITGA3-210ENST00000507771 E9PCH4 1651 aa16.34■□□□□ 0.21
ITGA3-210ENST00000507771 SPATA31D1Q6ZQQ2 1576 aa16.34■□□□□ 0.21
ITGA3-210ENST00000507771 PREX1Q8TCU6 1659 aa16.34■□□□□ 0.21
ITGA3-210ENST00000507771 SLC52A1Q9NWF4 448 aa16.32■□□□□ 0.2
ITGA3-210ENST00000507771 SETD1BQ9UPS6 1966 aaKnown RBP16.31■□□□□ 0.2
ITGA3-210ENST00000507771 CFAP65Q6ZU64 1925 aaKnown RBP16.31■□□□□ 0.2
ITGA3-210ENST00000507771 NOS1P29475 1434 aa16.31■□□□□ 0.2
ITGA3-210ENST00000507771 UHRF1BP1Q6BDS2 1440 aa16.31■□□□□ 0.2
ITGA3-210ENST00000507771 NLRP1Q9C000 1473 aa16.3■□□□□ 0.2
ITGA3-210ENST00000507771 STAG3Q9UJ98 1225 aa16.3■□□□□ 0.2
ITGA3-210ENST00000507771 FOXD1Q16676 465 aa16.29■□□□□ 0.2
ITGA3-210ENST00000507771 PTPRTO14522 1441 aa16.28■□□□□ 0.2
ITGA3-210ENST00000507771 SPHKAPQ2M3C7 1700 aa16.28■□□□□ 0.2
ITGA3-210ENST00000507771 MYO3AQ8NEV4 1616 aa16.27■□□□□ 0.19
ITGA3-210ENST00000507771 TRPM2O94759 1503 aa16.26■□□□□ 0.19
ITGA3-210ENST00000507771 CCDC144AA2RUR9 1427 aa16.26■□□□□ 0.19
ITGA3-210ENST00000507771 SYNMO15061 1565 aa16.26■□□□□ 0.19
ITGA3-210ENST00000507771 A2ML1A8K2U0 1454 aa16.25■□□□□ 0.19
ITGA3-210ENST00000507771 IDI1Q13907 227 aa16.25■□□□□ 0.19
ITGA3-210ENST00000507771 CHGAP10645 457 aaKnown RBP16.24■□□□□ 0.19
ITGA3-210ENST00000507771 THEMISQ8N1K5 641 aaPredicted RBP16.24■□□□□ 0.19
ITGA3-210ENST00000507771 CEP170BQ9Y4F5 1589 aaPredicted RBP16.24■□□□□ 0.19
ITGA3-210ENST00000507771 DHX57Q6P158 1386 aaKnown RBP16.24■□□□□ 0.19
ITGA3-210ENST00000507771 UGGT1Q9NYU2 1555 aa16.22■□□□□ 0.19
ITGA3-210ENST00000507771 ZNF142P52746 1687 aaPredicted RBP16.21■□□□□ 0.19
ITGA3-210ENST00000507771 ANKRD30BQ9BXX2 1392 aa16.21■□□□□ 0.19
ITGA3-210ENST00000507771 PLA2R1Q13018 1463 aa16.21■□□□□ 0.19
ITGA3-210ENST00000507771 PIK3C2BO00750 1634 aa16.2■□□□□ 0.18
ITGA3-210ENST00000507771 LMTK3Q96Q04 1460 aa16.19■□□□□ 0.18
ITGA3-210ENST00000507771 HDGFP51858 240 aaKnown RBP16.19■□□□□ 0.18
ITGA3-210ENST00000507771 CLTCL1P53675 1640 aa16.19■□□□□ 0.18
ITGA3-210ENST00000507771 ADGRB3O60242 1522 aa16.19■□□□□ 0.18
ITGA3-210ENST00000507771 KDM5AP29375 1690 aaKnown RBP16.18■□□□□ 0.18
ITGA3-210ENST00000507771 ZNF326Q5BKZ1 582 aaKnown RBP16.18■□□□□ 0.18
ITGA3-210ENST00000507771 CCER1Q8TC90 406 aaPredicted RBP16.18■□□□□ 0.18
ITGA3-210ENST00000507771 KIF1BO60333 1816 aa16.17■□□□□ 0.18
ITGA3-210ENST00000507771 EID1Q9Y6B2 187 aa16.16■□□□□ 0.18
ITGA3-210ENST00000507771 UBR1Q8IWV7 1749 aa16.16■□□□□ 0.18
ITGA3-210ENST00000507771 CLSPNQ9HAW4 1339 aa16.15■□□□□ 0.18
ITGA3-210ENST00000507771 HSPA2P54652 639 aa16.14■□□□□ 0.17
ITGA3-210ENST00000507771 ANKLE2Q86XL3 938 aa16.14■□□□□ 0.17
ITGA3-210ENST00000507771 ABCF1Q8NE71 845 aaKnown RBP eCLIP16.14■□□□□ 0.17
ITGA3-210ENST00000507771 TMEM131LA2VDJ0 1609 aa16.14■□□□□ 0.17
ITGA3-210ENST00000507771 PPP1R15AO75807 674 aaPredicted RBP16.13■□□□□ 0.17
ITGA3-210ENST00000507771 RPGRIP1LQ68CZ1 1315 aa16.13■□□□□ 0.17
ITGA3-210ENST00000507771 TMEM2Q9UHN6 1383 aa16.13■□□□□ 0.17
ITGA3-210ENST00000507771 RGL3Q3MIN7 710 aa16.12■□□□□ 0.17
ITGA3-210ENST00000507771 NEUROD1Q13562 356 aa16.11■□□□□ 0.17
ITGA3-210ENST00000507771 NEURL4Q96JN8 1562 aa16.11■□□□□ 0.17
ITGA3-210ENST00000507771 SLIT1O75093 1534 aa16.1■□□□□ 0.17
ITGA3-210ENST00000507771 TXNDC2Q86VQ3 553 aa16.1■□□□□ 0.17
Retrieved 100 of 20,778 RNA–protein pairs in 24.6 ms