RNA–Protein interactions for RNA: ENST00000507594.1

SMAD1-207, Transcript of SMAD family member 1, humanhuman

TSL 4

Gene SMAD1, Length 558 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMAD1-207ENST00000507594 ADGRL2O95490 1459 aa13.53□□□□□ -0.24
SMAD1-207ENST00000507594 ATXN8OSP0DMR3 200 aa13.52□□□□□ -0.25
SMAD1-207ENST00000507594 A2MP01023 1474 aa13.52□□□□□ -0.25
SMAD1-207ENST00000507594 GCC2Q8IWJ2 1684 aa13.51□□□□□ -0.25
SMAD1-207ENST00000507594 DUOX2Q9NRD8 1548 aa13.51□□□□□ -0.25
SMAD1-207ENST00000507594 ATP10AO60312 1499 aa13.51□□□□□ -0.25
SMAD1-207ENST00000507594 ROCK1Q13464 1354 aa13.51□□□□□ -0.25
SMAD1-207ENST00000507594 NCOA1Q15788 1441 aa13.5□□□□□ -0.25
SMAD1-207ENST00000507594 MLECQ14165 292 aa13.48□□□□□ -0.25
SMAD1-207ENST00000507594 ANKRD50Q9ULJ7 1429 aa13.47□□□□□ -0.25
SMAD1-207ENST00000507594 SLC4A2P04920 1241 aa13.47□□□□□ -0.25
SMAD1-207ENST00000507594 HFM1A2PYH4 1435 aa13.47□□□□□ -0.25
SMAD1-207ENST00000507594 ERBINQ96RT1 1412 aa13.47□□□□□ -0.25
SMAD1-207ENST00000507594 DHX29Q7Z478 1369 aaKnown RBP13.46□□□□□ -0.25
SMAD1-207ENST00000507594 KIF3BO15066 747 aa13.46□□□□□ -0.25
SMAD1-207ENST00000507594 GRWD1Q9BQ67 446 aaKnown RBP eCLIP13.46□□□□□ -0.25
SMAD1-207ENST00000507594 EIF2AK4Q9P2K8 1649 aaKnown RBP13.46□□□□□ -0.26
SMAD1-207ENST00000507594 ESF1Q9H501 851 aaKnown RBP13.45□□□□□ -0.26
SMAD1-207ENST00000507594 NAIPQ13075 1403 aa13.45□□□□□ -0.26
SMAD1-207ENST00000507594 SETD5Q9C0A6 1442 aa13.45□□□□□ -0.26
SMAD1-207ENST00000507594 REREQ9P2R6 1566 aa13.45□□□□□ -0.26
SMAD1-207ENST00000507594 MYCNP04198 464 aaPredicted RBP13.44□□□□□ -0.26
SMAD1-207ENST00000507594 GGT6Q6P531 493 aa13.44□□□□□ -0.26
SMAD1-207ENST00000507594 TRIM52Q96A61 297 aa13.44□□□□□ -0.26
SMAD1-207ENST00000507594 KANK1Q14678 1352 aa13.42□□□□□ -0.26
SMAD1-207ENST00000507594 RAB3GAP2Q9H2M9 1393 aa13.41□□□□□ -0.26
SMAD1-207ENST00000507594 SIGLEC1Q9BZZ2 1709 aa13.41□□□□□ -0.26
SMAD1-207ENST00000507594 AGLP35573 1532 aa13.4□□□□□ -0.26
SMAD1-207ENST00000507594 RNF17Q9BXT8 1623 aaKnown RBP13.39□□□□□ -0.27
SMAD1-207ENST00000507594 BCORL1Q5H9F3 1711 aa13.38□□□□□ -0.27
SMAD1-207ENST00000507594 FER1L4A9Z1Z3 1794 aa13.37□□□□□ -0.27
SMAD1-207ENST00000507594 UNC13BO14795 1591 aa13.37□□□□□ -0.27
SMAD1-207ENST00000507594 NUP155O75694 1391 aa13.37□□□□□ -0.27
SMAD1-207ENST00000507594 CEP152O94986 1710 aa13.37□□□□□ -0.27
SMAD1-207ENST00000507594 WASHC2CQ9Y4E1 1318 aa13.37□□□□□ -0.27
SMAD1-207ENST00000507594 CLTCQ00610 1675 aaKnown RBP13.36□□□□□ -0.27
SMAD1-207ENST00000507594 DEPDC5O75140 1603 aa13.35□□□□□ -0.27
SMAD1-207ENST00000507594 PRDM15P57071 1507 aaPredicted RBP13.35□□□□□ -0.27
SMAD1-207ENST00000507594 ZC3H13Q5T200 1668 aaKnown RBP13.34□□□□□ -0.27
SMAD1-207ENST00000507594 RIMS1Q86UR5 1692 aaKnown RBP13.34□□□□□ -0.27
SMAD1-207ENST00000507594 KDM5DQ9BY66 1539 aa13.34□□□□□ -0.27
SMAD1-207ENST00000507594 ACIN1Q9UKV3 1341 aaKnown RBP13.34□□□□□ -0.27
SMAD1-207ENST00000507594 MROH1Q8NDA8 1641 aa13.33□□□□□ -0.28
SMAD1-207ENST00000507594 MADDQ8WXG6 1647 aa13.33□□□□□ -0.28
SMAD1-207ENST00000507594 IQGAP3Q86VI3 1631 aa13.32□□□□□ -0.28
SMAD1-207ENST00000507594 FAM135AQ9P2D6 1515 aa13.32□□□□□ -0.28
SMAD1-207ENST00000507594 ABCC3O15438 1527 aa13.31□□□□□ -0.28
SMAD1-207ENST00000507594 CAMSAP1Q5T5Y3 1602 aa13.31□□□□□ -0.28
SMAD1-207ENST00000507594 CNTLNQ9NXG0 1405 aa13.3□□□□□ -0.28
SMAD1-207ENST00000507594 TET3O43151 1660 aa13.29□□□□□ -0.28
SMAD1-207ENST00000507594 AMER1Q5JTC6 1135 aaPredicted RBP13.29□□□□□ -0.28
SMAD1-207ENST00000507594 ADAMTSL3P82987 1691 aa13.28□□□□□ -0.28
SMAD1-207ENST00000507594 CFAP65Q6ZU64 1925 aaKnown RBP13.28□□□□□ -0.28
SMAD1-207ENST00000507594 HRCP23327 699 aa13.27□□□□□ -0.29
SMAD1-207ENST00000507594 EFCAB6Q5THR3 1501 aa13.27□□□□□ -0.29
SMAD1-207ENST00000507594 VWDEQ8N2E2 1590 aa13.27□□□□□ -0.29
SMAD1-207ENST00000507594 MROH2AA6NES4 1674 aa13.27□□□□□ -0.29
SMAD1-207ENST00000507594 PZPP20742 1482 aa13.26□□□□□ -0.29
SMAD1-207ENST00000507594 PKD2Q13563 968 aa13.26□□□□□ -0.29
SMAD1-207ENST00000507594 MPHOSPH9Q99550 1183 aa13.26□□□□□ -0.29
SMAD1-207ENST00000507594 LMTK2Q8IWU2 1503 aa13.25□□□□□ -0.29
SMAD1-207ENST00000507594 E9PCH4 1651 aa13.24□□□□□ -0.29
SMAD1-207ENST00000507594 C3P01024 1663 aa13.24□□□□□ -0.29
SMAD1-207ENST00000507594 ZMYM3Q14202 1370 aa13.23□□□□□ -0.29
SMAD1-207ENST00000507594 CCER1Q8TC90 406 aaPredicted RBP13.23□□□□□ -0.29
SMAD1-207ENST00000507594 CEBPAP49715 358 aaPredicted RBP13.22□□□□□ -0.29
SMAD1-207ENST00000507594 PREX1Q8TCU6 1659 aa13.21□□□□□ -0.29
SMAD1-207ENST00000507594 SPHKAPQ2M3C7 1700 aa13.21□□□□□ -0.3
SMAD1-207ENST00000507594 PTPRMP28827 1452 aa13.21□□□□□ -0.3
SMAD1-207ENST00000507594 NPATQ14207 1427 aa13.21□□□□□ -0.3
SMAD1-207ENST00000507594 RPRD2Q5VT52 1461 aaKnown RBP13.2□□□□□ -0.3
SMAD1-207ENST00000507594 DHX57Q6P158 1386 aaKnown RBP13.2□□□□□ -0.3
SMAD1-207ENST00000507594 ERVK-7P63135 1459 aa13.19□□□□□ -0.3
SMAD1-207ENST00000507594 KDM4FA0A1W2PPD8 638 aa13.19□□□□□ -0.3
SMAD1-207ENST00000507594 ARHGAP31Q2M1Z3 1444 aa13.19□□□□□ -0.3
SMAD1-207ENST00000507594 CHGAP10645 457 aaKnown RBP13.18□□□□□ -0.3
SMAD1-207ENST00000507594 FBXO31Q5XUX0 539 aaPredicted RBP13.18□□□□□ -0.3
SMAD1-207ENST00000507594 STAG3Q9UJ98 1225 aa13.18□□□□□ -0.3
SMAD1-207ENST00000507594 TNRQ92752 1358 aa13.18□□□□□ -0.3
SMAD1-207ENST00000507594 CCDC144AA2RUR9 1427 aa13.16□□□□□ -0.3
SMAD1-207ENST00000507594 SPATA31D1Q6ZQQ2 1576 aa13.15□□□□□ -0.3
SMAD1-207ENST00000507594 TRPM2O94759 1503 aa13.15□□□□□ -0.3
SMAD1-207ENST00000507594 MYO3AQ8NEV4 1616 aa13.14□□□□□ -0.31
SMAD1-207ENST00000507594 SYNMO15061 1565 aa13.14□□□□□ -0.31
SMAD1-207ENST00000507594 UGGT1Q9NYU2 1555 aa13.14□□□□□ -0.31
SMAD1-207ENST00000507594 NEUROD1Q13562 356 aa13.13□□□□□ -0.31
SMAD1-207ENST00000507594 KIF1BO60333 1816 aa13.13□□□□□ -0.31
SMAD1-207ENST00000507594 CLTCL1P53675 1640 aa13.13□□□□□ -0.31
SMAD1-207ENST00000507594 NOS1P29475 1434 aa13.12□□□□□ -0.31
SMAD1-207ENST00000507594 UHRF1BP1Q6BDS2 1440 aa13.12□□□□□ -0.31
SMAD1-207ENST00000507594 FKBP8Q14318 412 aa13.11□□□□□ -0.31
SMAD1-207ENST00000507594 ZNF326Q5BKZ1 582 aaKnown RBP13.11□□□□□ -0.31
SMAD1-207ENST00000507594 RTN4Q9NQC3 1192 aaKnown RBP13.11□□□□□ -0.31
SMAD1-207ENST00000507594 PIK3C2BO00750 1634 aa13.1□□□□□ -0.31
SMAD1-207ENST00000507594 SLC52A1Q9NWF4 448 aa13.1□□□□□ -0.31
SMAD1-207ENST00000507594 PTPRTO14522 1441 aa13.1□□□□□ -0.31
SMAD1-207ENST00000507594 NLRP1Q9C000 1473 aa13.1□□□□□ -0.31
SMAD1-207ENST00000507594 ANKRD30BQ9BXX2 1392 aa13.09□□□□□ -0.31
SMAD1-207ENST00000507594 SETD1BQ9UPS6 1966 aaKnown RBP13.09□□□□□ -0.31
SMAD1-207ENST00000507594 ADGRB3O60242 1522 aa13.08□□□□□ -0.31
Retrieved 100 of 20,778 RNA–protein pairs in 23.6 ms