RNA–Protein interactions for RNA: ENST00000507516.3

COL6A4P2-203, Transcript of collagen type VI alpha 4 pseudogene 2, humanhuman

TSL 5

Gene COL6A4P2, Length 738 nt, Biotype processed transcript.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COL6A4P2-203ENST00000507516 ANKLE2Q86XL3 938 aa15.39■□□□□ 0.05
COL6A4P2-203ENST00000507516 DROSHAQ9NRR4 1374 aaKnown RBP eCLIP15.37■□□□□ 0.05
COL6A4P2-203ENST00000507516 THEMISQ8N1K5 641 aaPredicted RBP15.36■□□□□ 0.05
COL6A4P2-203ENST00000507516 SENP3Q9H4L4 574 aaPredicted RBP15.36■□□□□ 0.05
COL6A4P2-203ENST00000507516 VWDEQ8N2E2 1590 aa15.36■□□□□ 0.05
COL6A4P2-203ENST00000507516 DHX29Q7Z478 1369 aaKnown RBP15.36■□□□□ 0.05
COL6A4P2-203ENST00000507516 NPHP4O75161 1426 aaPredicted RBP15.34■□□□□ 0.05
COL6A4P2-203ENST00000507516 PZPP20742 1482 aa15.34■□□□□ 0.05
COL6A4P2-203ENST00000507516 ALKQ9UM73 1620 aa15.34■□□□□ 0.05
COL6A4P2-203ENST00000507516 ZNF644Q9H582 1327 aaPredicted RBP15.34■□□□□ 0.05
COL6A4P2-203ENST00000507516 ADGBQ8N7X0 1667 aa15.33■□□□□ 0.04
COL6A4P2-203ENST00000507516 KIF3BO15066 747 aa15.33■□□□□ 0.04
COL6A4P2-203ENST00000507516 POLR1AO95602 1720 aaPredicted RBP15.33■□□□□ 0.04
COL6A4P2-203ENST00000507516 RTEL1-TNFRSF6BF6WH68 1400 aa15.33■□□□□ 0.04
COL6A4P2-203ENST00000507516 WASHC2CQ9Y4E1 1318 aa15.32■□□□□ 0.04
COL6A4P2-203ENST00000507516 MTUS2Q5JR59 1369 aa15.32■□□□□ 0.04
COL6A4P2-203ENST00000507516 MIA2Q96PC5 1412 aa15.32■□□□□ 0.04
COL6A4P2-203ENST00000507516 MED14O60244 1454 aa15.32■□□□□ 0.04
COL6A4P2-203ENST00000507516 MBD5Q9P267 1494 aa15.32■□□□□ 0.04
COL6A4P2-203ENST00000507516 NLRP1Q9C000 1473 aa15.31■□□□□ 0.04
COL6A4P2-203ENST00000507516 KDM5DQ9BY66 1539 aa15.31■□□□□ 0.04
COL6A4P2-203ENST00000507516 FAM135AQ9P2D6 1515 aa15.31■□□□□ 0.04
COL6A4P2-203ENST00000507516 UGGT1Q9NYU2 1555 aa15.29■□□□□ 0.04
COL6A4P2-203ENST00000507516 LRRC7Q96NW7 1537 aa15.28■□□□□ 0.04
COL6A4P2-203ENST00000507516 RGS17Q9UGC6 210 aaPredicted RBP15.27■□□□□ 0.04
COL6A4P2-203ENST00000507516 DEPDC5O75140 1603 aa15.27■□□□□ 0.03
COL6A4P2-203ENST00000507516 RNF17Q9BXT8 1623 aaKnown RBP15.25■□□□□ 0.03
COL6A4P2-203ENST00000507516 TIAM1Q13009 1591 aa15.24■□□□□ 0.03
COL6A4P2-203ENST00000507516 IQGAP1P46940 1657 aa15.23■□□□□ 0.03
COL6A4P2-203ENST00000507516 CCDC141Q6ZP82 1450 aa15.23■□□□□ 0.03
COL6A4P2-203ENST00000507516 CHIC1Q5VXU3 224 aa15.23■□□□□ 0.03
COL6A4P2-203ENST00000507516 SYNMO15061 1565 aa15.22■□□□□ 0.03
COL6A4P2-203ENST00000507516 RSPH4AQ5TD94 716 aa15.21■□□□□ 0.03
COL6A4P2-203ENST00000507516 CEP162Q5TB80 1403 aa15.2■□□□□ 0.02
COL6A4P2-203ENST00000507516 EHBP1L1Q8N3D4 1523 aa15.19■□□□□ 0.02
COL6A4P2-203ENST00000507516 POTEAQ6S8J7 498 aa15.18■□□□□ 0.02
COL6A4P2-203ENST00000507516 STRCP1A6NGW2 1772 aa15.18■□□□□ 0.02
COL6A4P2-203ENST00000507516 CAMSAP2Q08AD1 1489 aa15.17■□□□□ 0.02
COL6A4P2-203ENST00000507516 ERVK-7P63135 1459 aa15.16■□□□□ 0.02
COL6A4P2-203ENST00000507516 SCAF11Q99590 1463 aaKnown RBP15.16■□□□□ 0.02
COL6A4P2-203ENST00000507516 TSPY4P0CV99 314 aa15.16■□□□□ 0.02
COL6A4P2-203ENST00000507516 TSPY10P0CW01 314 aa15.16■□□□□ 0.02
COL6A4P2-203ENST00000507516 ABCC3O15438 1527 aa15.15■□□□□ 0.02
COL6A4P2-203ENST00000507516 FAM135BQ49AJ0 1406 aa15.15■□□□□ 0.02
COL6A4P2-203ENST00000507516 TXNDC2Q86VQ3 553 aa15.14■□□□□ 0.01
COL6A4P2-203ENST00000507516 LTKP29376 864 aa15.13■□□□□ 0.01
COL6A4P2-203ENST00000507516 NCOA2Q15596 1464 aa15.12■□□□□ 0.01
COL6A4P2-203ENST00000507516 ZC3H13Q5T200 1668 aaKnown RBP15.12■□□□□ 0.01
COL6A4P2-203ENST00000507516 EID1Q9Y6B2 187 aa15.11■□□□□ 0.01
COL6A4P2-203ENST00000507516 ARHGAP23Q9P227 1491 aa15.1■□□□□ 0.01
COL6A4P2-203ENST00000507516 ARHGEF5Q12774 1597 aa15.1■□□□□ 0.01
COL6A4P2-203ENST00000507516 SLIT1O75093 1534 aa15.09■□□□□ 0.01
COL6A4P2-203ENST00000507516 TMEM94Q12767 1356 aa15.09■□□□□ 0.01
COL6A4P2-203ENST00000507516 UBR1Q8IWV7 1749 aa15.06■□□□□ 0
COL6A4P2-203ENST00000507516 KCNA6P17658 529 aa15.05■□□□□ -0
COL6A4P2-203ENST00000507516 TMEM2Q9UHN6 1383 aa15.05■□□□□ -0
COL6A4P2-203ENST00000507516 MROH1Q8NDA8 1641 aa15.04■□□□□ -0
COL6A4P2-203ENST00000507516 PROSER2Q86WR7 435 aaPredicted RBP15.04■□□□□ -0
COL6A4P2-203ENST00000507516 EIF2AK4Q9P2K8 1649 aaKnown RBP15.03■□□□□ -0
COL6A4P2-203ENST00000507516 LRRC9Q6ZRR7 1453 aa15.03■□□□□ -0
COL6A4P2-203ENST00000507516 RBM33Q96EV2 1170 aaKnown RBP15.03■□□□□ -0
COL6A4P2-203ENST00000507516 STAG3Q9UJ98 1225 aa15.03■□□□□ -0
COL6A4P2-203ENST00000507516 MAST1Q9Y2H9 1570 aa15.02■□□□□ -0
COL6A4P2-203ENST00000507516 ARHGAP31Q2M1Z3 1444 aa15.02■□□□□ -0
COL6A4P2-203ENST00000507516 XIRP1Q702N8 1843 aaKnown RBP15.02■□□□□ -0
COL6A4P2-203ENST00000507516 JCADQ9P266 1359 aa15.01□□□□□ -0.01
COL6A4P2-203ENST00000507516 ROBO1Q9Y6N7 1651 aa15.01□□□□□ -0.01
COL6A4P2-203ENST00000507516 MAP3K1Q13233 1512 aa15.01□□□□□ -0.01
COL6A4P2-203ENST00000507516 SLC26A8Q96RN1 970 aa15□□□□□ -0.01
COL6A4P2-203ENST00000507516 MSH6P52701 1360 aa14.98□□□□□ -0.01
COL6A4P2-203ENST00000507516 PRDM15P57071 1507 aaPredicted RBP14.98□□□□□ -0.01
COL6A4P2-203ENST00000507516 DUOX2Q9NRD8 1548 aa14.98□□□□□ -0.01
COL6A4P2-203ENST00000507516 SETD1AO15047 1707 aaKnown RBP14.98□□□□□ -0.01
COL6A4P2-203ENST00000507516 UPF1Q92900 1129 aaKnown RBP eCLIP14.98□□□□□ -0.01
COL6A4P2-203ENST00000507516 SLAIN2Q9P270 581 aa14.98□□□□□ -0.01
COL6A4P2-203ENST00000507516 CEP152O94986 1710 aa14.97□□□□□ -0.01
COL6A4P2-203ENST00000507516 NKTRP30414 1462 aaKnown RBP14.97□□□□□ -0.01
COL6A4P2-203ENST00000507516 GRWD1Q9BQ67 446 aaKnown RBP eCLIP14.97□□□□□ -0.01
COL6A4P2-203ENST00000507516 EFCAB6Q5THR3 1501 aa14.97□□□□□ -0.01
COL6A4P2-203ENST00000507516 IDI1Q13907 227 aa14.96□□□□□ -0.01
COL6A4P2-203ENST00000507516 KIF15Q9NS87 1388 aa14.96□□□□□ -0.02
COL6A4P2-203ENST00000507516 PIK3C2BO00750 1634 aa14.95□□□□□ -0.02
COL6A4P2-203ENST00000507516 ZNF772Q68DY9 489 aaPredicted RBP14.95□□□□□ -0.02
COL6A4P2-203ENST00000507516 TRIM52Q96A61 297 aa14.95□□□□□ -0.02
COL6A4P2-203ENST00000507516 MYOM3Q5VTT5 1437 aa14.94□□□□□ -0.02
COL6A4P2-203ENST00000507516 ERBINQ96RT1 1412 aa14.94□□□□□ -0.02
COL6A4P2-203ENST00000507516 MEX3CQ5U5Q3 659 aaKnown RBP14.94□□□□□ -0.02
COL6A4P2-203ENST00000507516 BCANQ96GW7 911 aa14.94□□□□□ -0.02
COL6A4P2-203ENST00000507516 KANK1Q14678 1352 aa14.94□□□□□ -0.02
COL6A4P2-203ENST00000507516 TET3O43151 1660 aa14.93□□□□□ -0.02
COL6A4P2-203ENST00000507516 SPATA31A6Q5VVP1 1343 aa14.93□□□□□ -0.02
COL6A4P2-203ENST00000507516 RRP7BPQ9NSQ0 103 aa14.92□□□□□ -0.02
COL6A4P2-203ENST00000507516 NWD1Q149M9 1564 aa14.92□□□□□ -0.02
COL6A4P2-203ENST00000507516 LRP6O75581 1613 aa14.92□□□□□ -0.02
COL6A4P2-203ENST00000507516 PHLPP1O60346 1717 aa14.91□□□□□ -0.02
COL6A4P2-203ENST00000507516 FGD6Q6ZV73 1430 aa14.91□□□□□ -0.02
COL6A4P2-203ENST00000507516 CFAP65Q6ZU64 1925 aaKnown RBP14.89□□□□□ -0.03
COL6A4P2-203ENST00000507516 KDM5AP29375 1690 aaKnown RBP14.89□□□□□ -0.03
COL6A4P2-203ENST00000507516 COL16A1Q07092 1604 aaPredicted RBP14.88□□□□□ -0.03
COL6A4P2-203ENST00000507516 RXRBP28702 533 aa14.88□□□□□ -0.03
Retrieved 100 of 20,778 RNA–protein pairs in 11.7 ms