RNA–Protein interactions for RNA: ENST00000507320.5

TRIM6-209, Transcript of tripartite motif containing 6, humanhuman

TSL 2 BASIC

Gene TRIM6, Length 1,767 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRIM6-209ENST00000507320 ARID4BQ4LE39 1312 aaPredicted RBP15.97■□□□□ 0.15
TRIM6-209ENST00000507320 MROH1Q8NDA8 1641 aa15.95■□□□□ 0.14
TRIM6-209ENST00000507320 MLECQ14165 292 aa15.95■□□□□ 0.14
TRIM6-209ENST00000507320 GGT6Q6P531 493 aa15.95■□□□□ 0.14
TRIM6-209ENST00000507320 RNF17Q9BXT8 1623 aaKnown RBP15.94■□□□□ 0.14
TRIM6-209ENST00000507320 DEPDC5O75140 1603 aa15.94■□□□□ 0.14
TRIM6-209ENST00000507320 UNC13BO14795 1591 aa15.92■□□□□ 0.14
TRIM6-209ENST00000507320 GRWD1Q9BQ67 446 aaKnown RBP eCLIP15.92■□□□□ 0.14
TRIM6-209ENST00000507320 PRDM15P57071 1507 aaPredicted RBP15.91■□□□□ 0.14
TRIM6-209ENST00000507320 NUP155O75694 1391 aa15.89■□□□□ 0.13
TRIM6-209ENST00000507320 TRIM52Q96A61 297 aa15.88■□□□□ 0.13
TRIM6-209ENST00000507320 VWDEQ8N2E2 1590 aa15.88■□□□□ 0.13
TRIM6-209ENST00000507320 CEP152O94986 1710 aa15.87■□□□□ 0.13
TRIM6-209ENST00000507320 HRCP23327 699 aa15.87■□□□□ 0.13
TRIM6-209ENST00000507320 IQGAP3Q86VI3 1631 aa15.86■□□□□ 0.13
TRIM6-209ENST00000507320 ADAMTSL3P82987 1691 aa15.86■□□□□ 0.13
TRIM6-209ENST00000507320 ABCC3O15438 1527 aa15.85■□□□□ 0.13
TRIM6-209ENST00000507320 KDM5DQ9BY66 1539 aa15.85■□□□□ 0.13
TRIM6-209ENST00000507320 PZPP20742 1482 aa15.85■□□□□ 0.13
TRIM6-209ENST00000507320 WASHC2CQ9Y4E1 1318 aa15.85■□□□□ 0.13
TRIM6-209ENST00000507320 FAM135AQ9P2D6 1515 aa15.85■□□□□ 0.13
TRIM6-209ENST00000507320 MADDQ8WXG6 1647 aa15.85■□□□□ 0.13
TRIM6-209ENST00000507320 CLTCQ00610 1675 aaKnown RBP15.85■□□□□ 0.13
TRIM6-209ENST00000507320 FER1L4A9Z1Z3 1794 aa15.85■□□□□ 0.13
TRIM6-209ENST00000507320 KANK1Q14678 1352 aa15.84■□□□□ 0.13
TRIM6-209ENST00000507320 PPP6R1Q9UPN7 881 aa15.82■□□□□ 0.12
TRIM6-209ENST00000507320 ZC3H13Q5T200 1668 aaKnown RBP15.82■□□□□ 0.12
TRIM6-209ENST00000507320 LMTK2Q8IWU2 1503 aa15.81■□□□□ 0.12
TRIM6-209ENST00000507320 CAMSAP1Q5T5Y3 1602 aa15.8■□□□□ 0.12
TRIM6-209ENST00000507320 SLC4A1APQ9BWU0 796 aaKnown RBP15.8■□□□□ 0.12
TRIM6-209ENST00000507320 TET3O43151 1660 aa15.8■□□□□ 0.12
TRIM6-209ENST00000507320 RIMS1Q86UR5 1692 aaKnown RBP15.8■□□□□ 0.12
TRIM6-209ENST00000507320 KDM4FA0A1W2PPD8 638 aa15.8■□□□□ 0.12
TRIM6-209ENST00000507320 MPHOSPH9Q99550 1183 aa15.8■□□□□ 0.12
TRIM6-209ENST00000507320 ESF1Q9H501 851 aaKnown RBP15.8■□□□□ 0.12
TRIM6-209ENST00000507320 EFCAB6Q5THR3 1501 aa15.79■□□□□ 0.12
TRIM6-209ENST00000507320 CFAP65Q6ZU64 1925 aaKnown RBP15.78■□□□□ 0.12
TRIM6-209ENST00000507320 ACIN1Q9UKV3 1341 aaKnown RBP15.78■□□□□ 0.12
TRIM6-209ENST00000507320 E9PCH4 1651 aa15.78■□□□□ 0.12
TRIM6-209ENST00000507320 CNTLNQ9NXG0 1405 aa15.78■□□□□ 0.12
TRIM6-209ENST00000507320 ZMYM3Q14202 1370 aa15.77■□□□□ 0.12
TRIM6-209ENST00000507320 NPATQ14207 1427 aa15.77■□□□□ 0.12
TRIM6-209ENST00000507320 MROH2AA6NES4 1674 aa15.77■□□□□ 0.11
TRIM6-209ENST00000507320 PKD2Q13563 968 aa15.77■□□□□ 0.11
TRIM6-209ENST00000507320 FOXD1Q16676 465 aa15.77■□□□□ 0.11
TRIM6-209ENST00000507320 CEBPAP49715 358 aaPredicted RBP15.76■□□□□ 0.11
TRIM6-209ENST00000507320 DHX57Q6P158 1386 aaKnown RBP15.76■□□□□ 0.11
TRIM6-209ENST00000507320 C3P01024 1663 aa15.76■□□□□ 0.11
TRIM6-209ENST00000507320 ARHGAP31Q2M1Z3 1444 aa15.74■□□□□ 0.11
TRIM6-209ENST00000507320 FBXO31Q5XUX0 539 aaPredicted RBP15.74■□□□□ 0.11
TRIM6-209ENST00000507320 PLPPR3Q6T4P5 718 aa15.74■□□□□ 0.11
TRIM6-209ENST00000507320 PTPRMP28827 1452 aa15.73■□□□□ 0.11
TRIM6-209ENST00000507320 RPRD2Q5VT52 1461 aaKnown RBP15.72■□□□□ 0.11
TRIM6-209ENST00000507320 PREX1Q8TCU6 1659 aa15.71■□□□□ 0.11
TRIM6-209ENST00000507320 ERVK-7P63135 1459 aa15.7■□□□□ 0.1
TRIM6-209ENST00000507320 PLA2R1Q13018 1463 aa15.7■□□□□ 0.1
TRIM6-209ENST00000507320 SPHKAPQ2M3C7 1700 aa15.69■□□□□ 0.1
TRIM6-209ENST00000507320 NOS1P29475 1434 aa15.68■□□□□ 0.1
TRIM6-209ENST00000507320 SPATA31D1Q6ZQQ2 1576 aa15.68■□□□□ 0.1
TRIM6-209ENST00000507320 PTPRTO14522 1441 aa15.68■□□□□ 0.1
TRIM6-209ENST00000507320 SYNMO15061 1565 aa15.67■□□□□ 0.1
TRIM6-209ENST00000507320 ANKRD30BQ9BXX2 1392 aa15.67■□□□□ 0.1
TRIM6-209ENST00000507320 UGGT1Q9NYU2 1555 aa15.67■□□□□ 0.1
TRIM6-209ENST00000507320 TRPM2O94759 1503 aa15.64■□□□□ 0.09
TRIM6-209ENST00000507320 TNRQ92752 1358 aa15.63■□□□□ 0.09
TRIM6-209ENST00000507320 CCER1Q8TC90 406 aaPredicted RBP15.62■□□□□ 0.09
TRIM6-209ENST00000507320 CLTCL1P53675 1640 aa15.62■□□□□ 0.09
TRIM6-209ENST00000507320 SETD1BQ9UPS6 1966 aaKnown RBP15.62■□□□□ 0.09
TRIM6-209ENST00000507320 PIK3C2BO00750 1634 aa15.62■□□□□ 0.09
TRIM6-209ENST00000507320 IDI1Q13907 227 aa15.61■□□□□ 0.09
TRIM6-209ENST00000507320 PHF23Q9BUL5 403 aaPredicted RBP15.61■□□□□ 0.09
TRIM6-209ENST00000507320 SIN3AQ96ST3 1273 aa15.6■□□□□ 0.09
TRIM6-209ENST00000507320 CCDC144AA2RUR9 1427 aa15.6■□□□□ 0.09
TRIM6-209ENST00000507320 MYO3AQ8NEV4 1616 aa15.59■□□□□ 0.09
TRIM6-209ENST00000507320 SLC52A1Q9NWF4 448 aa15.58■□□□□ 0.08
TRIM6-209ENST00000507320 NLRP1Q9C000 1473 aa15.56■□□□□ 0.08
TRIM6-209ENST00000507320 MYO5BQ9ULV0 1848 aa15.56■□□□□ 0.08
TRIM6-209ENST00000507320 NEUROD1Q13562 356 aa15.55■□□□□ 0.08
TRIM6-209ENST00000507320 KIF1BO60333 1816 aa15.55■□□□□ 0.08
TRIM6-209ENST00000507320 CEP170BQ9Y4F5 1589 aaPredicted RBP15.54■□□□□ 0.08
TRIM6-209ENST00000507320 TMEM131LA2VDJ0 1609 aa15.54■□□□□ 0.08
TRIM6-209ENST00000507320 CLSPNQ9HAW4 1339 aa15.54■□□□□ 0.08
TRIM6-209ENST00000507320 UBR1Q8IWV7 1749 aa15.53■□□□□ 0.08
TRIM6-209ENST00000507320 UHRF1BP1Q6BDS2 1440 aa15.53■□□□□ 0.08
TRIM6-209ENST00000507320 ZNF142P52746 1687 aaPredicted RBP15.53■□□□□ 0.08
TRIM6-209ENST00000507320 CHGAP10645 457 aaKnown RBP15.53■□□□□ 0.08
TRIM6-209ENST00000507320 A2ML1A8K2U0 1454 aa15.53■□□□□ 0.08
TRIM6-209ENST00000507320 SPATA31E1Q6ZUB1 1445 aa15.53■□□□□ 0.08
TRIM6-209ENST00000507320 ADGRB3O60242 1522 aa15.52■□□□□ 0.08
TRIM6-209ENST00000507320 RGL3Q3MIN7 710 aa15.51■□□□□ 0.07
TRIM6-209ENST00000507320 STAG3Q9UJ98 1225 aa15.51■□□□□ 0.07
TRIM6-209ENST00000507320 KDM5AP29375 1690 aaKnown RBP15.5■□□□□ 0.07
TRIM6-209ENST00000507320 LMTK3Q96Q04 1460 aa15.49■□□□□ 0.07
TRIM6-209ENST00000507320 NEURL4Q96JN8 1562 aa15.47■□□□□ 0.07
TRIM6-209ENST00000507320 ZNF326Q5BKZ1 582 aaKnown RBP15.47■□□□□ 0.07
TRIM6-209ENST00000507320 HSPA2P54652 639 aa15.46■□□□□ 0.07
TRIM6-209ENST00000507320 THEMISQ8N1K5 641 aaPredicted RBP15.45■□□□□ 0.06
TRIM6-209ENST00000507320 NEXMIFQ5QGS0 1516 aa15.45■□□□□ 0.06
TRIM6-209ENST00000507320 TMEM2Q9UHN6 1383 aa15.45■□□□□ 0.06
TRIM6-209ENST00000507320 NUTM2DQ5VT03 806 aaPredicted RBP15.44■□□□□ 0.06
Retrieved 100 of 20,778 RNA–protein pairs in 20.6 ms