RNA–Protein interactions for RNA: ENST00000507302.6

SNF8-205, Transcript of SNF8, ESCRT-II complex subunit, humanhuman

TSL 3

Gene SNF8, Length 742 nt, Biotype nonsense mediated decay, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SNF8-205ENST00000507302 ZNF644Q9H582 1327 aaPredicted RBP26.77■■□□□ 1.88
SNF8-205ENST00000507302 CEP162Q5TB80 1403 aa26.76■■□□□ 1.87
SNF8-205ENST00000507302 PZPP20742 1482 aa26.73■■□□□ 1.87
SNF8-205ENST00000507302 CPS1P31327 1500 aa26.72■■□□□ 1.87
SNF8-205ENST00000507302 KDM5DQ9BY66 1539 aa26.7■■□□□ 1.87
SNF8-205ENST00000507302 TNRQ92752 1358 aa26.68■■□□□ 1.86
SNF8-205ENST00000507302 CCDC141Q6ZP82 1450 aa26.67■■□□□ 1.86
SNF8-205ENST00000507302 SHANK2Q9UPX8 1470 aa26.67■■□□□ 1.86
SNF8-205ENST00000507302 VWDEQ8N2E2 1590 aa26.65■■□□□ 1.86
SNF8-205ENST00000507302 DEPDC5O75140 1603 aa26.65■■□□□ 1.86
SNF8-205ENST00000507302 MED14O60244 1454 aa26.64■■□□□ 1.86
SNF8-205ENST00000507302 FBXO31Q5XUX0 539 aaPredicted RBP26.64■■□□□ 1.86
SNF8-205ENST00000507302 CAMSAP2Q08AD1 1489 aa26.62■■□□□ 1.85
SNF8-205ENST00000507302 NLRP1Q9C000 1473 aa26.62■■□□□ 1.85
SNF8-205ENST00000507302 RSPH4AQ5TD94 716 aa26.62■■□□□ 1.85
SNF8-205ENST00000507302 ARHGEF5Q12774 1597 aa26.62■■□□□ 1.85
SNF8-205ENST00000507302 ALKQ9UM73 1620 aa26.61■■□□□ 1.85
SNF8-205ENST00000507302 KIF3BO15066 747 aa26.61■■□□□ 1.85
SNF8-205ENST00000507302 MED1Q15648 1581 aaPredicted RBP26.6■■□□□ 1.85
SNF8-205ENST00000507302 MIA2Q96PC5 1412 aa26.6■■□□□ 1.85
SNF8-205ENST00000507302 NCOA2Q15596 1464 aa26.59■■□□□ 1.85
SNF8-205ENST00000507302 HSPA1LP34931 641 aa26.57■■□□□ 1.84
SNF8-205ENST00000507302 UGGT1Q9NYU2 1555 aa26.57■■□□□ 1.84
SNF8-205ENST00000507302 RNF17Q9BXT8 1623 aaKnown RBP26.57■■□□□ 1.84
SNF8-205ENST00000507302 TOM1O60784 492 aa26.56■■□□□ 1.84
SNF8-205ENST00000507302 DROSHAQ9NRR4 1374 aaKnown RBP eCLIP26.56■■□□□ 1.843e-6■□□□□ 10.3
SNF8-205ENST00000507302 ANKLE2Q86XL3 938 aa26.55■■□□□ 1.84
SNF8-205ENST00000507302 THEMISQ8N1K5 641 aaPredicted RBP26.55■■□□□ 1.84
SNF8-205ENST00000507302 WASHC2CQ9Y4E1 1318 aa26.55■■□□□ 1.84
SNF8-205ENST00000507302 ZC3H13Q5T200 1668 aaKnown RBP26.53■■□□□ 1.84
SNF8-205ENST00000507302 NPHP4O75161 1426 aaPredicted RBP26.52■■□□□ 1.84
SNF8-205ENST00000507302 IQGAP1P46940 1657 aa26.52■■□□□ 1.84
SNF8-205ENST00000507302 MAST1Q9Y2H9 1570 aa26.51■■□□□ 1.83
SNF8-205ENST00000507302 STRCP1A6NGW2 1772 aa26.51■■□□□ 1.83
SNF8-205ENST00000507302 ABCC3O15438 1527 aa26.49■■□□□ 1.83
SNF8-205ENST00000507302 EIF2AK4Q9P2K8 1649 aaKnown RBP26.48■■□□□ 1.83
SNF8-205ENST00000507302 PIP4K2BP78356 416 aa26.47■■□□□ 1.83
SNF8-205ENST00000507302 MROH1Q8NDA8 1641 aa26.47■■□□□ 1.83
SNF8-205ENST00000507302 SYNMO15061 1565 aa26.45■■□□□ 1.82
SNF8-205ENST00000507302 LRRC7Q96NW7 1537 aa26.44■■□□□ 1.82
SNF8-205ENST00000507302 ERVK-7P63135 1459 aa26.42■■□□□ 1.82
SNF8-205ENST00000507302 SCAF1Q9H7N4 1312 aaKnown RBP26.42■■□□□ 1.82
SNF8-205ENST00000507302 TSPY4P0CV99 314 aa26.41■■□□□ 1.82
SNF8-205ENST00000507302 TSPY10P0CW01 314 aa26.41■■□□□ 1.82
SNF8-205ENST00000507302 UBR1Q8IWV7 1749 aa26.41■■□□□ 1.82
SNF8-205ENST00000507302 LRRC9Q6ZRR7 1453 aa26.38■■□□□ 1.81
SNF8-205ENST00000507302 CEP152O94986 1710 aa26.35■■□□□ 1.81
SNF8-205ENST00000507302 ARHGAP23Q9P227 1491 aa26.35■■□□□ 1.81
SNF8-205ENST00000507302 SLIT1O75093 1534 aa26.34■■□□□ 1.81
SNF8-205ENST00000507302 XIRP1Q702N8 1843 aaKnown RBP26.32■■□□□ 1.8
SNF8-205ENST00000507302 SCAF11Q99590 1463 aaKnown RBP26.31■■□□□ 1.8
SNF8-205ENST00000507302 MAP3K1Q13233 1512 aa26.31■■□□□ 1.8
SNF8-205ENST00000507302 ARHGAP31Q2M1Z3 1444 aa26.31■■□□□ 1.8
SNF8-205ENST00000507302 DUOX2Q9NRD8 1548 aa26.3■■□□□ 1.8
SNF8-205ENST00000507302 PRDM15P57071 1507 aaPredicted RBP26.29■■□□□ 1.8
SNF8-205ENST00000507302 CFAP65Q6ZU64 1925 aaKnown RBP26.29■■□□□ 1.8
SNF8-205ENST00000507302 VPS8Q8N3P4 1428 aa26.28■■□□□ 1.8
SNF8-205ENST00000507302 MYOM3Q5VTT5 1437 aa26.25■■□□□ 1.79
SNF8-205ENST00000507302 LTKP29376 864 aa26.24■■□□□ 1.79
SNF8-205ENST00000507302 KDM5AP29375 1690 aaKnown RBP26.23■■□□□ 1.79
SNF8-205ENST00000507302 CROCC2H7BZ55 1655 aa26.22■■□□□ 1.79
SNF8-205ENST00000507302 PHF23Q9BUL5 403 aaPredicted RBP26.21■■□□□ 1.79
SNF8-205ENST00000507302 ERBINQ96RT1 1412 aa26.21■■□□□ 1.79
SNF8-205ENST00000507302 PIK3C2BO00750 1634 aa26.19■■□□□ 1.78
SNF8-205ENST00000507302 KANK4Q5T7N3 995 aaPredicted RBP26.19■■□□□ 1.78
SNF8-205ENST00000507302 TXNDC2Q86VQ3 553 aa26.16■■□□□ 1.78
SNF8-205ENST00000507302 RGS17Q9UGC6 210 aaPredicted RBP26.16■■□□□ 1.78
SNF8-205ENST00000507302 KIF15Q9NS87 1388 aa26.16■■□□□ 1.78
SNF8-205ENST00000507302 FAM135BQ49AJ0 1406 aa26.15■■□□□ 1.78
SNF8-205ENST00000507302 TMEM2Q9UHN6 1383 aa26.15■■□□□ 1.78
SNF8-205ENST00000507302 ABCC5O15440 1437 aa26.14■■□□□ 1.78
SNF8-205ENST00000507302 LMTK2Q8IWU2 1503 aa26.14■■□□□ 1.77
SNF8-205ENST00000507302 TET3O43151 1660 aa26.12■■□□□ 1.77
SNF8-205ENST00000507302 EID1Q9Y6B2 187 aa26.09■■□□□ 1.77
SNF8-205ENST00000507302 EFCAB6Q5THR3 1501 aa26.09■■□□□ 1.77
SNF8-205ENST00000507302 PTPN23Q9H3S7 1636 aa26.08■■□□□ 1.77
SNF8-205ENST00000507302 NWD1Q149M9 1564 aa26.05■■□□□ 1.76
SNF8-205ENST00000507302 DAPK1P53355 1430 aa26.05■■□□□ 1.76
SNF8-205ENST00000507302 TMEM94Q12767 1356 aa26.04■■□□□ 1.76
SNF8-205ENST00000507302 NOS1P29475 1434 aa26.04■■□□□ 1.76
SNF8-205ENST00000507302 KCNA6P17658 529 aa26.03■■□□□ 1.76
SNF8-205ENST00000507302 SENP3Q9H4L4 574 aaPredicted RBP26.03■■□□□ 1.76
SNF8-205ENST00000507302 RRP7BPQ9NSQ0 103 aa26.03■■□□□ 1.76
SNF8-205ENST00000507302 ROBO1Q9Y6N7 1651 aa26.03■■□□□ 1.76
SNF8-205ENST00000507302 IDI1Q13907 227 aa26.02■■□□□ 1.76
SNF8-205ENST00000507302 KANK1Q14678 1352 aa26.01■■□□□ 1.75
SNF8-205ENST00000507302 NKTRP30414 1462 aaKnown RBP26■■□□□ 1.75
SNF8-205ENST00000507302 ADGRB3O60242 1522 aa25.99■■□□□ 1.75
SNF8-205ENST00000507302 FGD6Q6ZV73 1430 aa25.97■■□□□ 1.75
SNF8-205ENST00000507302 LOC105371045A0A1W2PR82 267 aa25.95■■□□□ 1.74
SNF8-205ENST00000507302 GRWD1Q9BQ67 446 aaKnown RBP eCLIP25.95■■□□□ 1.741e-6■■■■□ 19.4
SNF8-205ENST00000507302 ANKRD30AQ9BXX3 1397 aa25.94■■□□□ 1.74
SNF8-205ENST00000507302 POTEAQ6S8J7 498 aa25.93■■□□□ 1.74
SNF8-205ENST00000507302 ADGRL2O95490 1459 aa25.92■■□□□ 1.74
SNF8-205ENST00000507302 STAG3Q9UJ98 1225 aa25.92■■□□□ 1.74
SNF8-205ENST00000507302 CHD2O14647 1828 aaKnown RBP25.92■■□□□ 1.74
SNF8-205ENST00000507302 RPRD2Q5VT52 1461 aaKnown RBP25.91■■□□□ 1.74
SNF8-205ENST00000507302 ZFYVE9O95405 1425 aa25.91■■□□□ 1.74
SNF8-205ENST00000507302 SLC26A8Q96RN1 970 aa25.91■■□□□ 1.74
SNF8-205ENST00000507302 SLC52A1Q9NWF4 448 aa25.91■■□□□ 1.74
Retrieved 100 of 20,778 RNA–protein pairs in 39 ms