RNA–Protein interactions for RNA: ENST00000507123.1

SH3TC1-211, Transcript of SH3 domain and tetratricopeptide repeats 1, humanhuman

TSL 1 (best)

Gene SH3TC1, Length 554 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SH3TC1-211ENST00000507123 PTPRTO14522 1441 aa26.53■■□□□ 1.84
SH3TC1-211ENST00000507123 CAMSAP1Q5T5Y3 1602 aa26.51■■□□□ 1.83
SH3TC1-211ENST00000507123 CEP170BQ9Y4F5 1589 aaPredicted RBP26.51■■□□□ 1.83
SH3TC1-211ENST00000507123 RNF17Q9BXT8 1623 aaKnown RBP26.5■■□□□ 1.83
SH3TC1-211ENST00000507123 PTPN23Q9H3S7 1636 aa26.5■■□□□ 1.83
SH3TC1-211ENST00000507123 EIF2AK4Q9P2K8 1649 aaKnown RBP26.49■■□□□ 1.83
SH3TC1-211ENST00000507123 PZPP20742 1482 aa26.49■■□□□ 1.83
SH3TC1-211ENST00000507123 CROCC2H7BZ55 1655 aa26.47■■□□□ 1.83
SH3TC1-211ENST00000507123 CERKQ8TCT0 537 aa26.47■■□□□ 1.83
SH3TC1-211ENST00000507123 SHANK2Q9UPX8 1470 aa26.47■■□□□ 1.83
SH3TC1-211ENST00000507123 FGD6Q6ZV73 1430 aa26.46■■□□□ 1.83
SH3TC1-211ENST00000507123 PLA2R1Q13018 1463 aa26.45■■□□□ 1.82
SH3TC1-211ENST00000507123 WASHC2CQ9Y4E1 1318 aa26.44■■□□□ 1.82
SH3TC1-211ENST00000507123 TCOF1Q13428 1488 aaKnown RBP26.44■■□□□ 1.82
SH3TC1-211ENST00000507123 ABCC5O15440 1437 aa26.44■■□□□ 1.82
SH3TC1-211ENST00000507123 A2ML1A8K2U0 1454 aa26.43■■□□□ 1.82
SH3TC1-211ENST00000507123 DUOX2Q9NRD8 1548 aa26.43■■□□□ 1.82
SH3TC1-211ENST00000507123 ZC3H13Q5T200 1668 aaKnown RBP26.42■■□□□ 1.82
SH3TC1-211ENST00000507123 MROH1Q8NDA8 1641 aa26.42■■□□□ 1.82
SH3TC1-211ENST00000507123 ABCC3O15438 1527 aa26.41■■□□□ 1.82
SH3TC1-211ENST00000507123 DNMT1P26358 1616 aaKnown RBP26.41■■□□□ 1.82
SH3TC1-211ENST00000507123 TNRQ92752 1358 aa26.4■■□□□ 1.82
SH3TC1-211ENST00000507123 DAPK1P53355 1430 aa26.39■■□□□ 1.82
SH3TC1-211ENST00000507123 FBXO31Q5XUX0 539 aaPredicted RBP26.39■■□□□ 1.82
SH3TC1-211ENST00000507123 LTBP4Q8N2S1 1624 aa26.36■■□□□ 1.81
SH3TC1-211ENST00000507123 KIF15Q9NS87 1388 aa26.36■■□□□ 1.81
SH3TC1-211ENST00000507123 NCKAP5LQ9HCH0 1330 aa26.36■■□□□ 1.81
SH3TC1-211ENST00000507123 ERBINQ96RT1 1412 aa26.35■■□□□ 1.81
SH3TC1-211ENST00000507123 PKD2Q13563 968 aa26.34■■□□□ 1.81
SH3TC1-211ENST00000507123 PRDM15P57071 1507 aaPredicted RBP26.33■■□□□ 1.81
SH3TC1-211ENST00000507123 NLRP1Q9C000 1473 aa26.31■■□□□ 1.8
SH3TC1-211ENST00000507123 SPATA31D1Q6ZQQ2 1576 aa26.31■■□□□ 1.8
SH3TC1-211ENST00000507123 CEP152O94986 1710 aa26.31■■□□□ 1.8
SH3TC1-211ENST00000507123 RRP7BPQ9NSQ0 103 aa26.28■■□□□ 1.8
SH3TC1-211ENST00000507123 DEPDC5O75140 1603 aa26.28■■□□□ 1.8
SH3TC1-211ENST00000507123 ERVK-7P63135 1459 aa26.27■■□□□ 1.8
SH3TC1-211ENST00000507123 POLR1AO95602 1720 aaPredicted RBP26.26■■□□□ 1.79
SH3TC1-211ENST00000507123 NEURL4Q96JN8 1562 aa26.25■■□□□ 1.79
SH3TC1-211ENST00000507123 IQSEC2Q5JU85 1478 aa26.25■■□□□ 1.79
SH3TC1-211ENST00000507123 UGGT1Q9NYU2 1555 aa26.24■■□□□ 1.79
SH3TC1-211ENST00000507123 ANKRD30AQ9BXX3 1397 aa26.24■■□□□ 1.79
SH3TC1-211ENST00000507123 ADGRL2O95490 1459 aa26.23■■□□□ 1.79
SH3TC1-211ENST00000507123 ARHGAP31Q2M1Z3 1444 aa26.22■■□□□ 1.79
SH3TC1-211ENST00000507123 ZNF335Q9H4Z2 1342 aaPredicted RBP26.21■■□□□ 1.79
SH3TC1-211ENST00000507123 CHIC2Q9UKJ5 165 aa26.2■■□□□ 1.78
SH3TC1-211ENST00000507123 DROSHAQ9NRR4 1374 aaKnown RBP eCLIP26.2■■□□□ 1.78
SH3TC1-211ENST00000507123 THEMISQ8N1K5 641 aaPredicted RBP26.18■■□□□ 1.78
SH3TC1-211ENST00000507123 VWDEQ8N2E2 1590 aa26.18■■□□□ 1.78
SH3TC1-211ENST00000507123 LMTK2Q8IWU2 1503 aa26.16■■□□□ 1.78
SH3TC1-211ENST00000507123 FAM50AQ14320 339 aaKnown RBP26.15■■□□□ 1.78
SH3TC1-211ENST00000507123 MED14O60244 1454 aa26.14■■□□□ 1.78
SH3TC1-211ENST00000507123 CFAP65Q6ZU64 1925 aaKnown RBP26.14■■□□□ 1.77
SH3TC1-211ENST00000507123 KANK1Q14678 1352 aa26.13■■□□□ 1.77
SH3TC1-211ENST00000507123 ANKLE2Q86XL3 938 aa26.13■■□□□ 1.77
SH3TC1-211ENST00000507123 UBR1Q8IWV7 1749 aa26.12■■□□□ 1.77
SH3TC1-211ENST00000507123 GRWD1Q9BQ67 446 aaKnown RBP eCLIP26.12■■□□□ 1.77
SH3TC1-211ENST00000507123 NPHP4O75161 1426 aaPredicted RBP26.09■■□□□ 1.77
SH3TC1-211ENST00000507123 ANKRD50Q9ULJ7 1429 aa26.07■■□□□ 1.76
SH3TC1-211ENST00000507123 IQGAP1P46940 1657 aa26.07■■□□□ 1.76
SH3TC1-211ENST00000507123 EFCAB6Q5THR3 1501 aa26.07■■□□□ 1.76
SH3TC1-211ENST00000507123 CPS1P31327 1500 aa26.04■■□□□ 1.76
SH3TC1-211ENST00000507123 ARHGAP23Q9P227 1491 aa26.04■■□□□ 1.76
SH3TC1-211ENST00000507123 SLIT1O75093 1534 aa26.04■■□□□ 1.76
SH3TC1-211ENST00000507123 PIK3C2BO00750 1634 aa26.03■■□□□ 1.76
SH3TC1-211ENST00000507123 SYNMO15061 1565 aa26.01■■□□□ 1.75
SH3TC1-211ENST00000507123 SCAF11Q99590 1463 aaKnown RBP26■■□□□ 1.75
SH3TC1-211ENST00000507123 NOS1P29475 1434 aa26■■□□□ 1.75
SH3TC1-211ENST00000507123 ROCK1Q13464 1354 aa26■■□□□ 1.75
SH3TC1-211ENST00000507123 KDM5AP29375 1690 aaKnown RBP25.99■■□□□ 1.75
SH3TC1-211ENST00000507123 UNC13BO14795 1591 aa25.99■■□□□ 1.75
SH3TC1-211ENST00000507123 RPRD2Q5VT52 1461 aaKnown RBP25.97■■□□□ 1.75
SH3TC1-211ENST00000507123 TET3O43151 1660 aa25.96■■□□□ 1.75
SH3TC1-211ENST00000507123 UBAP1LF5GYI3 381 aa25.94■■□□□ 1.74
SH3TC1-211ENST00000507123 TMEM2Q9UHN6 1383 aa25.94■■□□□ 1.74
SH3TC1-211ENST00000507123 LTKP29376 864 aa25.93■■□□□ 1.74
SH3TC1-211ENST00000507123 STRCP1A6NGW2 1772 aa25.92■■□□□ 1.74
SH3TC1-211ENST00000507123 IDI1Q13907 227 aa25.92■■□□□ 1.74
SH3TC1-211ENST00000507123 PPARGC1BQ86YN6 1023 aaKnown RBP25.92■■□□□ 1.74
SH3TC1-211ENST00000507123 ADGRB3O60242 1522 aa25.92■■□□□ 1.74
SH3TC1-211ENST00000507123 GCC2Q8IWJ2 1684 aa25.91■■□□□ 1.74
SH3TC1-211ENST00000507123 TXNDC2Q86VQ3 553 aa25.9■■□□□ 1.74
SH3TC1-211ENST00000507123 STAG3Q9UJ98 1225 aa25.87■■□□□ 1.73
SH3TC1-211ENST00000507123 EID1Q9Y6B2 187 aa25.87■■□□□ 1.73
SH3TC1-211ENST00000507123 IQGAP3Q86VI3 1631 aa25.87■■□□□ 1.73
SH3TC1-211ENST00000507123 SLC52A1Q9NWF4 448 aa25.86■■□□□ 1.73
SH3TC1-211ENST00000507123 LRRC7Q96NW7 1537 aa25.85■■□□□ 1.73
SH3TC1-211ENST00000507123 RRBP1Q9P2E9 1410 aaKnown RBP25.84■■□□□ 1.73
SH3TC1-211ENST00000507123 E9PCH4 1651 aa25.83■■□□□ 1.73
SH3TC1-211ENST00000507123 ITGAEP38570 1179 aa25.83■■□□□ 1.73
SH3TC1-211ENST00000507123 ALKQ9UM73 1620 aa25.82■■□□□ 1.72
SH3TC1-211ENST00000507123 TOM1O60784 492 aa25.79■■□□□ 1.72
SH3TC1-211ENST00000507123 TMEM131LA2VDJ0 1609 aa25.77■■□□□ 1.72
SH3TC1-211ENST00000507123 NUP155O75694 1391 aa25.77■■□□□ 1.72
SH3TC1-211ENST00000507123 ZFYVE9O95405 1425 aa25.77■■□□□ 1.72
SH3TC1-211ENST00000507123 MYO5BQ9ULV0 1848 aa25.77■■□□□ 1.72
SH3TC1-211ENST00000507123 DISP3Q9P2K9 1392 aa25.73■■□□□ 1.71
SH3TC1-211ENST00000507123 PIP4K2BP78356 416 aa25.73■■□□□ 1.71
SH3TC1-211ENST00000507123 XIRP1Q702N8 1843 aaKnown RBP25.72■■□□□ 1.71
SH3TC1-211ENST00000507123 SCAF1Q9H7N4 1312 aaKnown RBP25.71■■□□□ 1.71
SH3TC1-211ENST00000507123 RIMS2Q9UQ26 1411 aa25.7■■□□□ 1.7
Retrieved 100 of 20,778 RNA–protein pairs in 10 ms