RNA–Protein interactions for RNA: ENST00000507017.5

SFXN1-206, Transcript of sideroflexin 1, humanhuman

TSL 5

Gene SFXN1, Length 572 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SFXN1-206ENST00000507017 ZC3H13Q5T200 1668 aaKnown RBP11.82□□□□□ -0.52
SFXN1-206ENST00000507017 DNMT1P26358 1616 aaKnown RBP11.82□□□□□ -0.52
SFXN1-206ENST00000507017 ANKRD30AQ9BXX3 1397 aa11.81□□□□□ -0.52
SFXN1-206ENST00000507017 ERBINQ96RT1 1412 aa11.81□□□□□ -0.52
SFXN1-206ENST00000507017 CEBPAP49715 358 aaPredicted RBP11.81□□□□□ -0.52
SFXN1-206ENST00000507017 WASHC2CQ9Y4E1 1318 aa11.81□□□□□ -0.52
SFXN1-206ENST00000507017 DAPK1P53355 1430 aa11.8□□□□□ -0.52
SFXN1-206ENST00000507017 RNF17Q9BXT8 1623 aaKnown RBP11.8□□□□□ -0.52
SFXN1-206ENST00000507017 KANK1Q14678 1352 aa11.79□□□□□ -0.52
SFXN1-206ENST00000507017 KIF15Q9NS87 1388 aa11.79□□□□□ -0.52
SFXN1-206ENST00000507017 ZNF142P52746 1687 aaPredicted RBP11.78□□□□□ -0.52
SFXN1-206ENST00000507017 PZPP20742 1482 aa11.78□□□□□ -0.52
SFXN1-206ENST00000507017 HSPA2P54652 639 aa11.77□□□□□ -0.53
SFXN1-206ENST00000507017 MYO3AQ8NEV4 1616 aa11.77□□□□□ -0.53
SFXN1-206ENST00000507017 ABCC5O15440 1437 aa11.77□□□□□ -0.53
SFXN1-206ENST00000507017 PTPRKQ15262 1439 aa11.77□□□□□ -0.53
SFXN1-206ENST00000507017 FAM50AQ14320 339 aaKnown RBP11.75□□□□□ -0.53
SFXN1-206ENST00000507017 PTPRTO14522 1441 aa11.75□□□□□ -0.53
SFXN1-206ENST00000507017 PLA2R1Q13018 1463 aa11.75□□□□□ -0.53
SFXN1-206ENST00000507017 NLRP1Q9C000 1473 aa11.75□□□□□ -0.53
SFXN1-206ENST00000507017 CEP170BQ9Y4F5 1589 aaPredicted RBP11.75□□□□□ -0.53
SFXN1-206ENST00000507017 TNRQ92752 1358 aa11.74□□□□□ -0.53
SFXN1-206ENST00000507017 A2ML1A8K2U0 1454 aa11.74□□□□□ -0.53
SFXN1-206ENST00000507017 ADGRL2O95490 1459 aa11.74□□□□□ -0.53
SFXN1-206ENST00000507017 PRDM15P57071 1507 aaPredicted RBP11.74□□□□□ -0.53
SFXN1-206ENST00000507017 ABCC3O15438 1527 aa11.73□□□□□ -0.53
SFXN1-206ENST00000507017 PKD2Q13563 968 aa11.73□□□□□ -0.53
SFXN1-206ENST00000507017 NCOA1Q15788 1441 aa11.73□□□□□ -0.53
SFXN1-206ENST00000507017 DROSHAQ9NRR4 1374 aaKnown RBP eCLIP11.73□□□□□ -0.53
SFXN1-206ENST00000507017 CAMSAP1Q5T5Y3 1602 aa11.71□□□□□ -0.53
SFXN1-206ENST00000507017 RRP7BPQ9NSQ0 103 aa11.71□□□□□ -0.53
SFXN1-206ENST00000507017 DEPDC5O75140 1603 aa11.71□□□□□ -0.54
SFXN1-206ENST00000507017 ARHGAP31Q2M1Z3 1444 aa11.7□□□□□ -0.54
SFXN1-206ENST00000507017 ROCK1Q13464 1354 aa11.69□□□□□ -0.54
SFXN1-206ENST00000507017 MROH1Q8NDA8 1641 aa11.69□□□□□ -0.54
SFXN1-206ENST00000507017 FBXO41Q8TF61 875 aa11.69□□□□□ -0.54
SFXN1-206ENST00000507017 SPATA31D1Q6ZQQ2 1576 aa11.69□□□□□ -0.54
SFXN1-206ENST00000507017 THEMISQ8N1K5 641 aaPredicted RBP11.68□□□□□ -0.54
SFXN1-206ENST00000507017 STRCQ7RTU9 1775 aa11.68□□□□□ -0.54
SFXN1-206ENST00000507017 ANKRD50Q9ULJ7 1429 aa11.68□□□□□ -0.54
SFXN1-206ENST00000507017 UGGT1Q9NYU2 1555 aa11.67□□□□□ -0.54
SFXN1-206ENST00000507017 LMTK2Q8IWU2 1503 aa11.67□□□□□ -0.54
SFXN1-206ENST00000507017 CEP152O94986 1710 aa11.67□□□□□ -0.54
SFXN1-206ENST00000507017 CHIC2Q9UKJ5 165 aa11.67□□□□□ -0.54
SFXN1-206ENST00000507017 ERVK-7P63135 1459 aa11.67□□□□□ -0.54
SFXN1-206ENST00000507017 IQSEC2Q5JU85 1478 aa11.66□□□□□ -0.54
SFXN1-206ENST00000507017 RPRD2Q5VT52 1461 aaKnown RBP11.65□□□□□ -0.54
SFXN1-206ENST00000507017 GRWD1Q9BQ67 446 aaKnown RBP eCLIP11.65□□□□□ -0.548e-7■■□□□ 11.6
SFXN1-206ENST00000507017 POLR1AO95602 1720 aaPredicted RBP11.65□□□□□ -0.54
SFXN1-206ENST00000507017 ANKLE2Q86XL3 938 aa11.64□□□□□ -0.55
SFXN1-206ENST00000507017 CERKQ8TCT0 537 aa11.64□□□□□ -0.55
SFXN1-206ENST00000507017 VWDEQ8N2E2 1590 aa11.63□□□□□ -0.55
SFXN1-206ENST00000507017 FBXO31Q5XUX0 539 aaPredicted RBP11.63□□□□□ -0.55
SFXN1-206ENST00000507017 ILDR1Q86SU0 546 aaPredicted RBP11.63□□□□□ -0.55
SFXN1-206ENST00000507017 EFCAB6Q5THR3 1501 aa11.63□□□□□ -0.55
SFXN1-206ENST00000507017 KDM5AP29375 1690 aaKnown RBP11.62□□□□□ -0.55
SFXN1-206ENST00000507017 RRBP1Q9P2E9 1410 aaKnown RBP11.61□□□□□ -0.55
SFXN1-206ENST00000507017 STAG3Q9UJ98 1225 aa11.61□□□□□ -0.55
SFXN1-206ENST00000507017 UNC13BO14795 1591 aa11.61□□□□□ -0.55
SFXN1-206ENST00000507017 TET3O43151 1660 aa11.61□□□□□ -0.55
SFXN1-206ENST00000507017 EID1Q9Y6B2 187 aa11.6□□□□□ -0.55
SFXN1-206ENST00000507017 NCKAP5LQ9HCH0 1330 aa11.6□□□□□ -0.55
SFXN1-206ENST00000507017 GCC2Q8IWJ2 1684 aa11.59□□□□□ -0.55
SFXN1-206ENST00000507017 SLC52A1Q9NWF4 448 aa11.59□□□□□ -0.55
SFXN1-206ENST00000507017 NPHP4O75161 1426 aaPredicted RBP11.59□□□□□ -0.55
SFXN1-206ENST00000507017 ACIN1Q9UKV3 1341 aaKnown RBP11.59□□□□□ -0.55
SFXN1-206ENST00000507017 MED14O60244 1454 aa11.58□□□□□ -0.56
SFXN1-206ENST00000507017 HDGFP51858 240 aaKnown RBP11.58□□□□□ -0.56
SFXN1-206ENST00000507017 CPS1P31327 1500 aa11.58□□□□□ -0.56
SFXN1-206ENST00000507017 UBR1Q8IWV7 1749 aa11.57□□□□□ -0.56
SFXN1-206ENST00000507017 ITGAEP38570 1179 aa11.57□□□□□ -0.56
SFXN1-206ENST00000507017 SCAF11Q99590 1463 aaKnown RBP11.57□□□□□ -0.56
SFXN1-206ENST00000507017 IQGAP3Q86VI3 1631 aa11.57□□□□□ -0.56
SFXN1-206ENST00000507017 SLIT1O75093 1534 aa11.56□□□□□ -0.56
SFXN1-206ENST00000507017 IQGAP1P46940 1657 aa11.56□□□□□ -0.56
SFXN1-206ENST00000507017 NOS1P29475 1434 aa11.56□□□□□ -0.56
SFXN1-206ENST00000507017 NEURL4Q96JN8 1562 aa11.55□□□□□ -0.56
SFXN1-206ENST00000507017 LTBP4Q8N2S1 1624 aa11.55□□□□□ -0.56
SFXN1-206ENST00000507017 ADGRB3O60242 1522 aa11.55□□□□□ -0.56
SFXN1-206ENST00000507017 CFAP65Q6ZU64 1925 aaKnown RBP11.54□□□□□ -0.56
SFXN1-206ENST00000507017 PIK3C2BO00750 1634 aa11.54□□□□□ -0.56
SFXN1-206ENST00000507017 ARHGAP23Q9P227 1491 aa11.54□□□□□ -0.56
SFXN1-206ENST00000507017 NUP155O75694 1391 aa11.54□□□□□ -0.56
SFXN1-206ENST00000507017 PPARGC1BQ86YN6 1023 aaKnown RBP11.53□□□□□ -0.56
SFXN1-206ENST00000507017 TMEM2Q9UHN6 1383 aa11.53□□□□□ -0.56
SFXN1-206ENST00000507017 TXNDC2Q86VQ3 553 aa11.52□□□□□ -0.57
SFXN1-206ENST00000507017 SYNMO15061 1565 aa11.52□□□□□ -0.57
SFXN1-206ENST00000507017 ZNF335Q9H4Z2 1342 aaPredicted RBP11.52□□□□□ -0.57
SFXN1-206ENST00000507017 HFM1A2PYH4 1435 aa11.52□□□□□ -0.57
SFXN1-206ENST00000507017 ABCF1Q8NE71 845 aaKnown RBP eCLIP11.51□□□□□ -0.57
SFXN1-206ENST00000507017 IDI1Q13907 227 aa11.5□□□□□ -0.57
SFXN1-206ENST00000507017 E9PCH4 1651 aa11.49□□□□□ -0.57
SFXN1-206ENST00000507017 TOM1O60784 492 aa11.48□□□□□ -0.57
SFXN1-206ENST00000507017 PPP1R15AO75807 674 aaPredicted RBP11.48□□□□□ -0.57
SFXN1-206ENST00000507017 NAIPQ13075 1403 aa11.48□□□□□ -0.57
SFXN1-206ENST00000507017 UBAP1LF5GYI3 381 aa11.46□□□□□ -0.57
SFXN1-206ENST00000507017 BCANQ96GW7 911 aa11.46□□□□□ -0.57
SFXN1-206ENST00000507017 SPHKAPQ2M3C7 1700 aa11.46□□□□□ -0.58
SFXN1-206ENST00000507017 CHGAP10645 457 aaKnown RBP11.45□□□□□ -0.58
SFXN1-206ENST00000507017 TMEM131LA2VDJ0 1609 aa11.45□□□□□ -0.58
Retrieved 100 of 20,778 RNA–protein pairs in 22.5 ms