RNA–Protein interactions for RNA: ENST00000506958.5

APBB3-213, Transcript of amyloid beta precursor protein binding family B member 3, human

TSL 3

Gene APBB3, Length 987 nt, Biotype retained intron, Subcellular localisation Cytosol .

RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
APBB3-213	ENST00000506958	RNF17	Q9BXT8	1623 aa	Known RBP	32.99	■■■□□ 2.87
APBB3-213	ENST00000506958	ZMYM3	Q14202	1370 aa		32.98	■■■□□ 2.87
APBB3-213	ENST00000506958	ERBIN	Q96RT1	1412 aa		32.98	■■■□□ 2.87
APBB3-213	ENST00000506958	KDM5D	Q9BY66	1539 aa		32.97	■■■□□ 2.87
APBB3-213	ENST00000506958	PPARGC1B	Q86YN6	1023 aa	Known RBP	32.97	■■■□□ 2.87
APBB3-213	ENST00000506958	NPAT	Q14207	1427 aa		32.96	■■■□□ 2.87
APBB3-213	ENST00000506958	ADGRL2	O95490	1459 aa		32.94	■■■□□ 2.86
APBB3-213	ENST00000506958	UHRF1BP1	Q6BDS2	1440 aa		32.94	■■■□□ 2.86
APBB3-213	ENST00000506958	RRP7BP	Q9NSQ0	103 aa		32.93	■■■□□ 2.86
APBB3-213	ENST00000506958	DROSHA	Q9NRR4	1374 aa	Known RBP eCLIP	32.93	■■■□□ 2.86
APBB3-213	ENST00000506958	CHIC2	Q9UKJ5	165 aa		32.92	■■■□□ 2.86
APBB3-213	ENST00000506958	NCOA1	Q15788	1441 aa		32.91	■■■□□ 2.86
APBB3-213	ENST00000506958	WASHC2C	Q9Y4E1	1318 aa		32.9	■■■□□ 2.86
APBB3-213	ENST00000506958	ZC3H13	Q5T200	1668 aa	Known RBP	32.89	■■■□□ 2.86
APBB3-213	ENST00000506958	PTPRK	Q15262	1439 aa		32.84	■■■□□ 2.85
APBB3-213	ENST00000506958	MROH1	Q8NDA8	1641 aa		32.83	■■■□□ 2.85
APBB3-213	ENST00000506958	ABCC3	O15438	1527 aa		32.82	■■■□□ 2.84
APBB3-213	ENST00000506958	PRDM15	P57071	1507 aa	Predicted RBP	32.82	■■■□□ 2.84
APBB3-213	ENST00000506958	PZP	P20742	1482 aa		32.81	■■■□□ 2.84
APBB3-213	ENST00000506958	RRBP1	Q9P2E9	1410 aa	Known RBP	32.81	■■■□□ 2.84
APBB3-213	ENST00000506958	DEPDC5	O75140	1603 aa		32.79	■■■□□ 2.84
APBB3-213	ENST00000506958	ROCK1	Q13464	1354 aa		32.79	■■■□□ 2.84
APBB3-213	ENST00000506958	HSPA2	P54652	639 aa		32.78	■■■□□ 2.84
APBB3-213	ENST00000506958	KANK1	Q14678	1352 aa		32.76	■■■□□ 2.83
APBB3-213	ENST00000506958	MYO3A	Q8NEV4	1616 aa		32.75	■■■□□ 2.83
APBB3-213	ENST00000506958	ANKRD50	Q9ULJ7	1429 aa		32.75	■■■□□ 2.83
APBB3-213	ENST00000506958	CEP152	O94986	1710 aa		32.73	■■■□□ 2.83
APBB3-213	ENST00000506958	ZNF142	P52746	1687 aa	Predicted RBP	32.72	■■■□□ 2.83
APBB3-213	ENST00000506958	CAMSAP1	Q5T5Y3	1602 aa		32.71	■■■□□ 2.83
APBB3-213	ENST00000506958	TNR	Q92752	1358 aa		32.7	■■■□□ 2.82
APBB3-213	ENST00000506958	ITGAE	P38570	1179 aa		32.69	■■■□□ 2.82
APBB3-213	ENST00000506958	GRWD1	Q9BQ67	446 aa	Known RBP eCLIP	32.67	■■■□□ 2.82
APBB3-213	ENST00000506958	CEP170B	Q9Y4F5	1589 aa	Predicted RBP	32.66	■■■□□ 2.82
APBB3-213	ENST00000506958	VWDE	Q8N2E2	1590 aa		32.64	■■■□□ 2.82
APBB3-213	ENST00000506958	LMTK2	Q8IWU2	1503 aa		32.63	■■■□□ 2.81
APBB3-213	ENST00000506958	A2ML1	A8K2U0	1454 aa		32.63	■■■□□ 2.81
APBB3-213	ENST00000506958	ARHGAP31	Q2M1Z3	1444 aa		32.63	■■■□□ 2.81
APBB3-213	ENST00000506958	FBXO31	Q5XUX0	539 aa	Predicted RBP	32.63	■■■□□ 2.81
APBB3-213	ENST00000506958	SPATA31D1	Q6ZQQ2	1576 aa		32.62	■■■□□ 2.81
APBB3-213	ENST00000506958	NLRP1	Q9C000	1473 aa		32.61	■■■□□ 2.81
APBB3-213	ENST00000506958	ERVK-7	P63135	1459 aa		32.6	■■■□□ 2.81
APBB3-213	ENST00000506958	DMRT2	Q9Y5R5	561 aa		32.58	■■■□□ 2.81
APBB3-213	ENST00000506958	UNC13B	O14795	1591 aa		32.57	■■■□□ 2.8
APBB3-213	ENST00000506958	STRC	Q7RTU9	1775 aa		32.55	■■■□□ 2.8
APBB3-213	ENST00000506958	PLA2R1	Q13018	1463 aa		32.54	■■■□□ 2.8
APBB3-213	ENST00000506958	EFCAB6	Q5THR3	1501 aa		32.52	■■■□□ 2.8
APBB3-213	ENST00000506958	CFAP65	Q6ZU64	1925 aa	Known RBP	32.51	■■■□□ 2.8
APBB3-213	ENST00000506958	TET3	O43151	1660 aa		32.48	■■■□□ 2.79
APBB3-213	ENST00000506958	RPRD2	Q5VT52	1461 aa	Known RBP	32.47	■■■□□ 2.79
APBB3-213	ENST00000506958	GCC2	Q8IWJ2	1684 aa		32.46	■■■□□ 2.79
APBB3-213	ENST00000506958	UGGT1	Q9NYU2	1555 aa		32.46	■■■□□ 2.79
APBB3-213	ENST00000506958	PTPRT	O14522	1441 aa		32.46	■■■□□ 2.79
APBB3-213	ENST00000506958	PKD2	Q13563	968 aa		32.45	■■■□□ 2.79
APBB3-213	ENST00000506958	IQGAP3	Q86VI3	1631 aa		32.44	■■■□□ 2.78
APBB3-213	ENST00000506958	THEMIS	Q8N1K5	641 aa	Predicted RBP	32.43	■■■□□ 2.78
APBB3-213	ENST00000506958	HFM1	A2PYH4	1435 aa		32.41	■■■□□ 2.78
APBB3-213	ENST00000506958	NAIP	Q13075	1403 aa		32.41	■■■□□ 2.78
APBB3-213	ENST00000506958	NUP155	O75694	1391 aa		32.39	■■■□□ 2.78
APBB3-213	ENST00000506958	NOS1	P29475	1434 aa		32.36	■■■□□ 2.77
APBB3-213	ENST00000506958	POLR1A	O95602	1720 aa	Predicted RBP	32.36	■■■□□ 2.77
APBB3-213	ENST00000506958	NCKAP5L	Q9HCH0	1330 aa		32.35	■■■□□ 2.77
APBB3-213	ENST00000506958	UBR1	Q8IWV7	1749 aa		32.33	■■■□□ 2.77
APBB3-213	ENST00000506958	SYNM	O15061	1565 aa		32.32	■■■□□ 2.76
APBB3-213	ENST00000506958	ANKLE2	Q86XL3	938 aa		32.31	■■■□□ 2.76
APBB3-213	ENST00000506958	KDM5A	P29375	1690 aa	Known RBP	32.31	■■■□□ 2.76
APBB3-213	ENST00000506958	PIK3C2B	O00750	1634 aa		32.29	■■■□□ 2.76
APBB3-213	ENST00000506958	SLC52A1	Q9NWF4	448 aa		32.29	■■■□□ 2.76
APBB3-213	ENST00000506958		E9PCH4	1651 aa		32.29	■■■□□ 2.76
APBB3-213	ENST00000506958	STAG3	Q9UJ98	1225 aa		32.27	■■■□□ 2.76
APBB3-213	ENST00000506958	NEURL4	Q96JN8	1562 aa		32.24	■■■□□ 2.75
APBB3-213	ENST00000506958	IDI1	Q13907	227 aa		32.23	■■■□□ 2.75
APBB3-213	ENST00000506958	ADGRB3	O60242	1522 aa		32.21	■■■□□ 2.75
APBB3-213	ENST00000506958	SLIT1	O75093	1534 aa		32.21	■■■□□ 2.75
APBB3-213	ENST00000506958	MED14	O60244	1454 aa		32.21	■■■□□ 2.75
APBB3-213	ENST00000506958	ARHGAP23	Q9P227	1491 aa		32.2	■■■□□ 2.75
APBB3-213	ENST00000506958	NPHP4	O75161	1426 aa	Predicted RBP	32.18	■■■□□ 2.74
APBB3-213	ENST00000506958	SCAF11	Q99590	1463 aa	Known RBP	32.17	■■■□□ 2.74
APBB3-213	ENST00000506958	TRIM52	Q96A61	297 aa		32.16	■■■□□ 2.74
APBB3-213	ENST00000506958	ACIN1	Q9UKV3	1341 aa	Known RBP	32.16	■■■□□ 2.74
APBB3-213	ENST00000506958	EID1	Q9Y6B2	187 aa		32.15	■■■□□ 2.74
APBB3-213	ENST00000506958	TMEM2	Q9UHN6	1383 aa		32.15	■■■□□ 2.74
APBB3-213	ENST00000506958	IQGAP1	P46940	1657 aa		32.15	■■■□□ 2.74
APBB3-213	ENST00000506958	SPHKAP	Q2M3C7	1700 aa		32.13	■■■□□ 2.73
APBB3-213	ENST00000506958	CERK	Q8TCT0	537 aa		32.13	■■■□□ 2.73
APBB3-213	ENST00000506958	TXNDC2	Q86VQ3	553 aa		32.1	■■■□□ 2.73
APBB3-213	ENST00000506958	LTBP4	Q8N2S1	1624 aa		32.09	■■■□□ 2.73
APBB3-213	ENST00000506958	TMEM131L	A2VDJ0	1609 aa		32.07	■■■□□ 2.72
APBB3-213	ENST00000506958	SETD5	Q9C0A6	1442 aa		32.06	■■■□□ 2.72
APBB3-213	ENST00000506958	ZNF335	Q9H4Z2	1342 aa	Predicted RBP	32.05	■■■□□ 2.72
APBB3-213	ENST00000506958	FBXO41	Q8TF61	875 aa		32.05	■■■□□ 2.72
APBB3-213	ENST00000506958	SLC4A1AP	Q9BWU0	796 aa	Known RBP	32.05	■■■□□ 2.72
APBB3-213	ENST00000506958	LTK	P29376	864 aa		32.04	■■■□□ 2.72
APBB3-213	ENST00000506958	MYO5B	Q9ULV0	1848 aa		32.03	■■■□□ 2.72
APBB3-213	ENST00000506958	HDGF	P51858	240 aa	Known RBP	32.03	■■■□□ 2.72
APBB3-213	ENST00000506958	TRPM2	O94759	1503 aa		32.03	■■■□□ 2.72
APBB3-213	ENST00000506958	IQSEC2	Q5JU85	1478 aa		32.03	■■■□□ 2.72
APBB3-213	ENST00000506958	CHGA	P10645	457 aa	Known RBP	32.01	■■■□□ 2.71
APBB3-213	ENST00000506958	ILDR1	Q86SU0	546 aa	Predicted RBP	31.99	■■■□□ 2.71
APBB3-213	ENST00000506958	CPS1	P31327	1500 aa		31.99	■■■□□ 2.71
APBB3-213	ENST00000506958	ZFYVE9	O95405	1425 aa		31.97	■■■□□ 2.71

Retrieved 100 of 20,778 RNA–protein pairs in 22.9 ms