RNA–Protein interactions for RNA: ENST00000506707.1

USP46-206, Transcript of ubiquitin specific peptidase 46, humanhuman

TSL 2

Gene USP46, Length 536 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
USP46-206ENST00000506707 PLEKHH2Q8IVE3 1493 aa8.82□□□□□ -1
USP46-206ENST00000506707 FRMPD1Q5SYB0 1578 aa8.82□□□□□ -1
USP46-206ENST00000506707 ABCC1P33527 1531 aa8.81□□□□□ -1
USP46-206ENST00000506707 ZNF518AQ6AHZ1 1483 aa8.81□□□□□ -1
USP46-206ENST00000506707 FGD6Q6ZV73 1430 aa8.8□□□□□ -1
USP46-206ENST00000506707 GALR2O43603 387 aaPredicted RBP8.8□□□□□ -1
USP46-206ENST00000506707 OTUD5Q96G74 571 aa8.8□□□□□ -1
USP46-206ENST00000506707 CAMSAP2Q08AD1 1489 aa8.8□□□□□ -1
USP46-206ENST00000506707 SYCP2Q9BX26 1530 aa8.8□□□□□ -1
USP46-206ENST00000506707 YEATS2Q9ULM3 1422 aa8.8□□□□□ -1
USP46-206ENST00000506707 SPAG9O60271 1321 aaKnown RBP8.8□□□□□ -1
USP46-206ENST00000506707 MAGI2Q86UL8 1455 aa8.79□□□□□ -1
USP46-206ENST00000506707 MLH3Q9UHC1 1453 aa8.79□□□□□ -1
USP46-206ENST00000506707 MYT1LQ9UL68 1186 aa8.79□□□□□ -1
USP46-206ENST00000506707 RICTORQ6R327 1708 aa8.79□□□□□ -1
USP46-206ENST00000506707 ITSN2Q9NZM3 1697 aa8.78□□□□□ -1
USP46-206ENST00000506707 TCOF1Q13428 1488 aaKnown RBP8.78□□□□□ -1
USP46-206ENST00000506707 TSPY4P0CV99 314 aa8.78□□□□□ -1
USP46-206ENST00000506707 TSPY10P0CW01 314 aa8.78□□□□□ -1
USP46-206ENST00000506707 FAM50AQ14320 339 aaKnown RBP8.78□□□□□ -1
USP46-206ENST00000506707 CREBZFQ9NS37 354 aa8.78□□□□□ -1
USP46-206ENST00000506707 ZMYM4Q5VZL5 1548 aa8.78□□□□□ -1
USP46-206ENST00000506707 KDM5CP41229 1560 aa8.78□□□□□ -1
USP46-206ENST00000506707 STAG3Q9UJ98 1225 aa8.77□□□□□ -1.01
USP46-206ENST00000506707 ATP10AO60312 1499 aa8.77□□□□□ -1.01
USP46-206ENST00000506707 POTEMA6NI47 508 aa8.76□□□□□ -1.01
USP46-206ENST00000506707 PAK3O75914 559 aaPredicted RBP8.76□□□□□ -1.01
USP46-206ENST00000506707 RTEL1-TNFRSF6BF6WH68 1400 aa8.76□□□□□ -1.01
USP46-206ENST00000506707 ABCC5O15440 1437 aa8.76□□□□□ -1.01
USP46-206ENST00000506707 CCDC141Q6ZP82 1450 aa8.76□□□□□ -1.01
USP46-206ENST00000506707 KDM4FA0A1W2PPD8 638 aa8.75□□□□□ -1.01
USP46-206ENST00000506707 PTPN23Q9H3S7 1636 aa8.75□□□□□ -1.01
USP46-206ENST00000506707 ZFYVE16Q7Z3T8 1539 aa8.75□□□□□ -1.01
USP46-206ENST00000506707 DROSHAQ9NRR4 1374 aaKnown RBP eCLIP8.74□□□□□ -1.01
USP46-206ENST00000506707 ARHGEF5Q12774 1597 aa8.74□□□□□ -1.01
USP46-206ENST00000506707 ARID4BQ4LE39 1312 aaPredicted RBP8.74□□□□□ -1.01
USP46-206ENST00000506707 DAPK1P53355 1430 aa8.73□□□□□ -1.01
USP46-206ENST00000506707 RRBP1Q9P2E9 1410 aaKnown RBP8.73□□□□□ -1.01
USP46-206ENST00000506707 POTEB2H3BUK9 544 aa8.73□□□□□ -1.01
USP46-206ENST00000506707 CHIC2Q9UKJ5 165 aa8.73□□□□□ -1.01
USP46-206ENST00000506707 HECW2Q9P2P5 1572 aa8.73□□□□□ -1.01
USP46-206ENST00000506707 PTPRKQ15262 1439 aa8.72□□□□□ -1.01
USP46-206ENST00000506707 C9orf84Q5VXU9 1444 aa8.72□□□□□ -1.01
USP46-206ENST00000506707 KIDINS220Q9ULH0 1771 aa8.72□□□□□ -1.01
USP46-206ENST00000506707 ATP7AQ04656 1500 aa8.72□□□□□ -1.01
USP46-206ENST00000506707 ARHGEF40Q8TER5 1519 aa8.72□□□□□ -1.01
USP46-206ENST00000506707 POTEGQ6S5H5 508 aa8.72□□□□□ -1.01
USP46-206ENST00000506707 RRP7BPQ9NSQ0 103 aa8.72□□□□□ -1.01
USP46-206ENST00000506707 DHX29Q7Z478 1369 aaKnown RBP8.72□□□□□ -1.01
USP46-206ENST00000506707 DIP2CQ9Y2E4 1556 aa8.71□□□□□ -1.02
USP46-206ENST00000506707 ITGAEP38570 1179 aa8.71□□□□□ -1.02
USP46-206ENST00000506707 MLECQ14165 292 aa8.71□□□□□ -1.02
USP46-206ENST00000506707 NCOA1Q15788 1441 aa8.71□□□□□ -1.02
USP46-206ENST00000506707 A2MP01023 1474 aa8.7□□□□□ -1.02
USP46-206ENST00000506707 INO80Q9ULG1 1556 aaPredicted RBP8.7□□□□□ -1.02
USP46-206ENST00000506707 ABCA6Q8N139 1617 aa8.69□□□□□ -1.02
USP46-206ENST00000506707 PHF12Q96QT6 1004 aa8.69□□□□□ -1.02
USP46-206ENST00000506707 ANKRD30AQ9BXX3 1397 aa8.69□□□□□ -1.02
USP46-206ENST00000506707 SHANK2Q9UPX8 1470 aa8.69□□□□□ -1.02
USP46-206ENST00000506707 AGLP35573 1532 aa8.69□□□□□ -1.02
USP46-206ENST00000506707 REREQ9P2R6 1566 aa8.69□□□□□ -1.02
USP46-206ENST00000506707 MAST1Q9Y2H9 1570 aa8.69□□□□□ -1.02
USP46-206ENST00000506707 DNMT1P26358 1616 aaKnown RBP8.69□□□□□ -1.02
USP46-206ENST00000506707 SIGLEC1Q9BZZ2 1709 aa8.68□□□□□ -1.02
USP46-206ENST00000506707 KIF3BO15066 747 aa8.68□□□□□ -1.02
USP46-206ENST00000506707 GGT6Q6P531 493 aa8.68□□□□□ -1.02
USP46-206ENST00000506707 PCDH10Q9P2E7 1040 aa8.68□□□□□ -1.02
USP46-206ENST00000506707 KIF15Q9NS87 1388 aa8.68□□□□□ -1.02
USP46-206ENST00000506707 ROCK1Q13464 1354 aa8.67□□□□□ -1.02
USP46-206ENST00000506707 PLXNC1O60486 1568 aa8.66□□□□□ -1.02
USP46-206ENST00000506707 ADGRL2O95490 1459 aa8.66□□□□□ -1.02
USP46-206ENST00000506707 DUOX2Q9NRD8 1548 aa8.64□□□□□ -1.03
USP46-206ENST00000506707 BCORL1Q5H9F3 1711 aa8.63□□□□□ -1.03
USP46-206ENST00000506707 ADAMTSL3P82987 1691 aa8.63□□□□□ -1.03
USP46-206ENST00000506707 CEBPAP49715 358 aaPredicted RBP8.63□□□□□ -1.03
USP46-206ENST00000506707 PELP1Q8IZL8 1130 aaKnown RBP8.63□□□□□ -1.03
USP46-206ENST00000506707 METRNQ9UJH8 293 aa8.63□□□□□ -1.03
USP46-206ENST00000506707 ERBINQ96RT1 1412 aa8.63□□□□□ -1.03
USP46-206ENST00000506707 ANKRD50Q9ULJ7 1429 aa8.63□□□□□ -1.03
USP46-206ENST00000506707 CROCC2H7BZ55 1655 aa8.62□□□□□ -1.03
USP46-206ENST00000506707 ADGBQ8N7X0 1667 aa8.62□□□□□ -1.03
USP46-206ENST00000506707 WASHC2CQ9Y4E1 1318 aa8.62□□□□□ -1.03
USP46-206ENST00000506707 ASTLQ6HA08 431 aaPredicted RBP8.62□□□□□ -1.03
USP46-206ENST00000506707 SLC39A7Q92504 469 aa8.62□□□□□ -1.03
USP46-206ENST00000506707 ESF1Q9H501 851 aaKnown RBP8.62□□□□□ -1.03
USP46-206ENST00000506707 PTPRMP28827 1452 aa8.62□□□□□ -1.03
USP46-206ENST00000506707 ZMYM3Q14202 1370 aa8.61□□□□□ -1.03
USP46-206ENST00000506707 MAMSTRQ6ZN01 415 aa8.61□□□□□ -1.03
USP46-206ENST00000506707 NAIPQ13075 1403 aa8.61□□□□□ -1.03
USP46-206ENST00000506707 MADDQ8WXG6 1647 aa8.59□□□□□ -1.03
USP46-206ENST00000506707 C7P10643 843 aa8.59□□□□□ -1.03
USP46-206ENST00000506707 HFM1A2PYH4 1435 aa8.59□□□□□ -1.03
USP46-206ENST00000506707 CNTLNQ9NXG0 1405 aa8.59□□□□□ -1.03
USP46-206ENST00000506707 FBXO31Q5XUX0 539 aaPredicted RBP8.58□□□□□ -1.04
USP46-206ENST00000506707 MS4A3Q96HJ5 214 aa8.58□□□□□ -1.04
USP46-206ENST00000506707 ATMINO43313 823 aaPredicted RBP8.57□□□□□ -1.04
USP46-206ENST00000506707 MNX1P50219 401 aaPredicted RBP8.57□□□□□ -1.04
USP46-206ENST00000506707 MROH1Q8NDA8 1641 aa8.57□□□□□ -1.04
USP46-206ENST00000506707 EIF2AK4Q9P2K8 1649 aaKnown RBP8.57□□□□□ -1.04
USP46-206ENST00000506707 KDM5DQ9BY66 1539 aa8.56□□□□□ -1.04
Retrieved 100 of 20,778 RNA–protein pairs in 40.4 ms