RNA–Protein interactions for RNA: ENST00000506165.1

APBB3-211, Transcript of amyloid beta precursor protein binding family B member 3, humanhuman

TSL 2

Gene APBB3, Length 560 nt, Biotype retained intron, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
APBB3-211ENST00000506165 FAM135AQ9P2D6 1515 aa27.99■■■□□ 2.07
APBB3-211ENST00000506165 DHX29Q7Z478 1369 aaKnown RBP27.99■■■□□ 2.07
APBB3-211ENST00000506165 PZPP20742 1482 aa27.95■■■□□ 2.07
APBB3-211ENST00000506165 CEP162Q5TB80 1403 aa27.95■■■□□ 2.07
APBB3-211ENST00000506165 CPS1P31327 1500 aa27.95■■■□□ 2.06
APBB3-211ENST00000506165 KDM5DQ9BY66 1539 aa27.95■■■□□ 2.06
APBB3-211ENST00000506165 ALKQ9UM73 1620 aa27.94■■■□□ 2.06
APBB3-211ENST00000506165 VWDEQ8N2E2 1590 aa27.94■■■□□ 2.06
APBB3-211ENST00000506165 MED1Q15648 1581 aaPredicted RBP27.91■■■□□ 2.06
APBB3-211ENST00000506165 SHANK2Q9UPX8 1470 aa27.91■■■□□ 2.06
APBB3-211ENST00000506165 DEPDC5O75140 1603 aa27.91■■■□□ 2.06
APBB3-211ENST00000506165 TNRQ92752 1358 aa27.9■■■□□ 2.06
APBB3-211ENST00000506165 FBXO31Q5XUX0 539 aaPredicted RBP27.9■■■□□ 2.06
APBB3-211ENST00000506165 STRCP1A6NGW2 1772 aa27.9■■■□□ 2.06
APBB3-211ENST00000506165 CCDC141Q6ZP82 1450 aa27.89■■■□□ 2.06
APBB3-211ENST00000506165 MED14O60244 1454 aa27.87■■■□□ 2.05
APBB3-211ENST00000506165 CAMSAP2Q08AD1 1489 aa27.86■■■□□ 2.05
APBB3-211ENST00000506165 ARHGEF5Q12774 1597 aa27.86■■■□□ 2.05
APBB3-211ENST00000506165 HSPA1LP34931 641 aa27.84■■■□□ 2.05
APBB3-211ENST00000506165 RNF17Q9BXT8 1623 aaKnown RBP27.84■■■□□ 2.05
APBB3-211ENST00000506165 KIF3BO15066 747 aa27.83■■■□□ 2.05
APBB3-211ENST00000506165 IQGAP1P46940 1657 aa27.83■■■□□ 2.05
APBB3-211ENST00000506165 NCOA2Q15596 1464 aa27.83■■■□□ 2.04
APBB3-211ENST00000506165 NLRP1Q9C000 1473 aa27.83■■■□□ 2.04
APBB3-211ENST00000506165 MIA2Q96PC5 1412 aa27.82■■■□□ 2.04
APBB3-211ENST00000506165 UGGT1Q9NYU2 1555 aa27.82■■■□□ 2.04
APBB3-211ENST00000506165 DROSHAQ9NRR4 1374 aaKnown RBP eCLIP27.8■■■□□ 2.04
APBB3-211ENST00000506165 ZC3H13Q5T200 1668 aaKnown RBP27.8■■■□□ 2.04
APBB3-211ENST00000506165 CFAP65Q6ZU64 1925 aaKnown RBP27.77■■■□□ 2.04
APBB3-211ENST00000506165 TOM1O60784 492 aa27.76■■■□□ 2.03
APBB3-211ENST00000506165 MAST1Q9Y2H9 1570 aa27.76■■■□□ 2.03
APBB3-211ENST00000506165 NPHP4O75161 1426 aaPredicted RBP27.75■■■□□ 2.03
APBB3-211ENST00000506165 MROH1Q8NDA8 1641 aa27.75■■■□□ 2.03
APBB3-211ENST00000506165 RSPH4AQ5TD94 716 aa27.75■■■□□ 2.03
APBB3-211ENST00000506165 ANKLE2Q86XL3 938 aa27.75■■■□□ 2.03
APBB3-211ENST00000506165 WASHC2CQ9Y4E1 1318 aa27.74■■■□□ 2.03
APBB3-211ENST00000506165 PIP4K2BP78356 416 aa27.74■■■□□ 2.03
APBB3-211ENST00000506165 EIF2AK4Q9P2K8 1649 aaKnown RBP27.74■■■□□ 2.03
APBB3-211ENST00000506165 ABCC3O15438 1527 aa27.73■■■□□ 2.03
APBB3-211ENST00000506165 UBR1Q8IWV7 1749 aa27.73■■■□□ 2.03
APBB3-211ENST00000506165 THEMISQ8N1K5 641 aaPredicted RBP27.73■■■□□ 2.03
APBB3-211ENST00000506165 CEP152O94986 1710 aa27.72■■■□□ 2.03
APBB3-211ENST00000506165 XIRP1Q702N8 1843 aaKnown RBP27.71■■■□□ 2.03
APBB3-211ENST00000506165 SYNMO15061 1565 aa27.71■■■□□ 2.03
APBB3-211ENST00000506165 LRRC7Q96NW7 1537 aa27.69■■■□□ 2.02
APBB3-211ENST00000506165 SCAF1Q9H7N4 1312 aaKnown RBP27.68■■■□□ 2.02
APBB3-211ENST00000506165 ERVK-7P63135 1459 aa27.66■■■□□ 2.02
APBB3-211ENST00000506165 LRRC9Q6ZRR7 1453 aa27.59■■■□□ 2.01
APBB3-211ENST00000506165 TSPY4P0CV99 314 aa27.58■■■□□ 2.01
APBB3-211ENST00000506165 TSPY10P0CW01 314 aa27.58■■■□□ 2.01
APBB3-211ENST00000506165 ARHGAP23Q9P227 1491 aa27.57■■■□□ 2
APBB3-211ENST00000506165 SLIT1O75093 1534 aa27.57■■■□□ 2
APBB3-211ENST00000506165 CROCC2H7BZ55 1655 aa27.52■■■□□ 2
APBB3-211ENST00000506165 PRDM15P57071 1507 aaPredicted RBP27.52■■■□□ 2
APBB3-211ENST00000506165 SCAF11Q99590 1463 aaKnown RBP27.52■■■□□ 2
APBB3-211ENST00000506165 DUOX2Q9NRD8 1548 aa27.51■■□□□ 1.99
APBB3-211ENST00000506165 PIK3C2BO00750 1634 aa27.49■■□□□ 1.99
APBB3-211ENST00000506165 ARHGAP31Q2M1Z3 1444 aa27.49■■□□□ 1.99
APBB3-211ENST00000506165 MAP3K1Q13233 1512 aa27.48■■□□□ 1.99
APBB3-211ENST00000506165 KDM5AP29375 1690 aaKnown RBP27.48■■□□□ 1.99
APBB3-211ENST00000506165 VPS8Q8N3P4 1428 aa27.48■■□□□ 1.99
APBB3-211ENST00000506165 LTKP29376 864 aa27.47■■□□□ 1.99
APBB3-211ENST00000506165 MYOM3Q5VTT5 1437 aa27.44■■□□□ 1.98
APBB3-211ENST00000506165 PHF23Q9BUL5 403 aaPredicted RBP27.44■■□□□ 1.98
APBB3-211ENST00000506165 RGS17Q9UGC6 210 aaPredicted RBP27.42■■□□□ 1.98
APBB3-211ENST00000506165 KANK4Q5T7N3 995 aaPredicted RBP27.41■■□□□ 1.98
APBB3-211ENST00000506165 ERBINQ96RT1 1412 aa27.38■■□□□ 1.97
APBB3-211ENST00000506165 TET3O43151 1660 aa27.37■■□□□ 1.97
APBB3-211ENST00000506165 TXNDC2Q86VQ3 553 aa27.37■■□□□ 1.97
APBB3-211ENST00000506165 ABCC5O15440 1437 aa27.35■■□□□ 1.97
APBB3-211ENST00000506165 SENP3Q9H4L4 574 aaPredicted RBP27.35■■□□□ 1.97
APBB3-211ENST00000506165 FAM135BQ49AJ0 1406 aa27.34■■□□□ 1.97
APBB3-211ENST00000506165 PTPN23Q9H3S7 1636 aa27.34■■□□□ 1.97
APBB3-211ENST00000506165 KIF15Q9NS87 1388 aa27.34■■□□□ 1.97
APBB3-211ENST00000506165 TMEM2Q9UHN6 1383 aa27.34■■□□□ 1.97
APBB3-211ENST00000506165 LMTK2Q8IWU2 1503 aa27.33■■□□□ 1.97
APBB3-211ENST00000506165 ROBO1Q9Y6N7 1651 aa27.33■■□□□ 1.97
APBB3-211ENST00000506165 EFCAB6Q5THR3 1501 aa27.31■■□□□ 1.96
APBB3-211ENST00000506165 NWD1Q149M9 1564 aa27.29■■□□□ 1.96
APBB3-211ENST00000506165 MYO5BQ9ULV0 1848 aa27.28■■□□□ 1.96
APBB3-211ENST00000506165 DAPK1P53355 1430 aa27.25■■□□□ 1.95
APBB3-211ENST00000506165 CHD2O14647 1828 aaKnown RBP27.25■■□□□ 1.95
APBB3-211ENST00000506165 TMEM94Q12767 1356 aa27.24■■□□□ 1.95
APBB3-211ENST00000506165 EID1Q9Y6B2 187 aa27.24■■□□□ 1.95
APBB3-211ENST00000506165 NOS1P29475 1434 aa27.24■■□□□ 1.95
APBB3-211ENST00000506165 ADGRB3O60242 1522 aa27.23■■□□□ 1.95
APBB3-211ENST00000506165 RRP7BPQ9NSQ0 103 aa27.23■■□□□ 1.95
APBB3-211ENST00000506165 IDI1Q13907 227 aa27.22■■□□□ 1.95
APBB3-211ENST00000506165 KCNA6P17658 529 aa27.2■■□□□ 1.94
APBB3-211ENST00000506165 NKTRP30414 1462 aaKnown RBP27.19■■□□□ 1.94
APBB3-211ENST00000506165 POTEAQ6S8J7 498 aa27.18■■□□□ 1.94
APBB3-211ENST00000506165 PHLPP1O60346 1717 aa27.17■■□□□ 1.94
APBB3-211ENST00000506165 GRWD1Q9BQ67 446 aaKnown RBP eCLIP27.17■■□□□ 1.94
APBB3-211ENST00000506165 KANK1Q14678 1352 aa27.16■■□□□ 1.94
APBB3-211ENST00000506165 SETD1AO15047 1707 aaKnown RBP27.16■■□□□ 1.94
APBB3-211ENST00000506165 FGD6Q6ZV73 1430 aa27.15■■□□□ 1.94
APBB3-211ENST00000506165 GCC2Q8IWJ2 1684 aa27.14■■□□□ 1.94
APBB3-211ENST00000506165 SLC26A8Q96RN1 970 aa27.13■■□□□ 1.93
APBB3-211ENST00000506165 ZFYVE9O95405 1425 aa27.11■■□□□ 1.93
APBB3-211ENST00000506165 RBM33Q96EV2 1170 aaKnown RBP27.11■■□□□ 1.93
Retrieved 100 of 20,778 RNA–protein pairs in 37.5 ms