RNA–Protein interactions for RNA: ENST00000506134.5

TRIM6-208, Transcript of tripartite motif containing 6, humanhuman

TSL 2 BASIC

Gene TRIM6, Length 1,398 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRIM6-208ENST00000506134 ANKRD50Q9ULJ7 1429 aa14.77□□□□□ -0.05
TRIM6-208ENST00000506134 AGLP35573 1532 aa14.76□□□□□ -0.05
TRIM6-208ENST00000506134 MAPK8IP2Q13387 824 aaPredicted RBP14.75□□□□□ -0.05
TRIM6-208ENST00000506134 HFM1A2PYH4 1435 aa14.75□□□□□ -0.05
TRIM6-208ENST00000506134 ERBINQ96RT1 1412 aa14.74□□□□□ -0.05
TRIM6-208ENST00000506134 GRWD1Q9BQ67 446 aaKnown RBP eCLIP14.73□□□□□ -0.05
TRIM6-208ENST00000506134 PCGF6Q9BYE7 350 aa14.73□□□□□ -0.05
TRIM6-208ENST00000506134 SETD5Q9C0A6 1442 aa14.72□□□□□ -0.05
TRIM6-208ENST00000506134 KDM4FA0A1W2PPD8 638 aa14.7□□□□□ -0.06
TRIM6-208ENST00000506134 EIF2AK4Q9P2K8 1649 aaKnown RBP14.7□□□□□ -0.06
TRIM6-208ENST00000506134 GCC2Q8IWJ2 1684 aa14.7□□□□□ -0.06
TRIM6-208ENST00000506134 BCORL1Q5H9F3 1711 aa14.69□□□□□ -0.06
TRIM6-208ENST00000506134 TRIM52Q96A61 297 aa14.68□□□□□ -0.06
TRIM6-208ENST00000506134 RAB3GAP2Q9H2M9 1393 aa14.68□□□□□ -0.06
TRIM6-208ENST00000506134 WASHC2CQ9Y4E1 1318 aa14.67□□□□□ -0.06
TRIM6-208ENST00000506134 ESF1Q9H501 851 aaKnown RBP14.66□□□□□ -0.06
TRIM6-208ENST00000506134 ADAMTSL3P82987 1691 aa14.65□□□□□ -0.06
TRIM6-208ENST00000506134 MROH1Q8NDA8 1641 aa14.65□□□□□ -0.06
TRIM6-208ENST00000506134 RNF17Q9BXT8 1623 aaKnown RBP14.65□□□□□ -0.06
TRIM6-208ENST00000506134 NUP155O75694 1391 aa14.65□□□□□ -0.06
TRIM6-208ENST00000506134 HRCP23327 699 aa14.64□□□□□ -0.07
TRIM6-208ENST00000506134 DEPDC5O75140 1603 aa14.64□□□□□ -0.07
TRIM6-208ENST00000506134 KANK1Q14678 1352 aa14.63□□□□□ -0.07
TRIM6-208ENST00000506134 CEBPAP49715 358 aaPredicted RBP14.63□□□□□ -0.07
TRIM6-208ENST00000506134 MADDQ8WXG6 1647 aa14.62□□□□□ -0.07
TRIM6-208ENST00000506134 ZMYM3Q14202 1370 aa14.62□□□□□ -0.07
TRIM6-208ENST00000506134 UNC13BO14795 1591 aa14.62□□□□□ -0.07
TRIM6-208ENST00000506134 PRDM15P57071 1507 aaPredicted RBP14.61□□□□□ -0.07
TRIM6-208ENST00000506134 FER1L4A9Z1Z3 1794 aa14.61□□□□□ -0.07
TRIM6-208ENST00000506134 CLTCQ00610 1675 aaKnown RBP14.6□□□□□ -0.07
TRIM6-208ENST00000506134 VWDEQ8N2E2 1590 aa14.6□□□□□ -0.07
TRIM6-208ENST00000506134 ABCC3O15438 1527 aa14.6□□□□□ -0.07
TRIM6-208ENST00000506134 KDM5DQ9BY66 1539 aa14.59□□□□□ -0.07
TRIM6-208ENST00000506134 RIMS1Q86UR5 1692 aaKnown RBP14.59□□□□□ -0.07
TRIM6-208ENST00000506134 MPHOSPH9Q99550 1183 aa14.59□□□□□ -0.07
TRIM6-208ENST00000506134 CNTLNQ9NXG0 1405 aa14.59□□□□□ -0.07
TRIM6-208ENST00000506134 CEP152O94986 1710 aa14.58□□□□□ -0.07
TRIM6-208ENST00000506134 ACIN1Q9UKV3 1341 aaKnown RBP14.58□□□□□ -0.08
TRIM6-208ENST00000506134 FBXO31Q5XUX0 539 aaPredicted RBP14.58□□□□□ -0.08
TRIM6-208ENST00000506134 SLC4A1APQ9BWU0 796 aaKnown RBP14.58□□□□□ -0.08
TRIM6-208ENST00000506134 FAM135AQ9P2D6 1515 aa14.57□□□□□ -0.08
TRIM6-208ENST00000506134 IQGAP3Q86VI3 1631 aa14.57□□□□□ -0.08
TRIM6-208ENST00000506134 PZPP20742 1482 aa14.56□□□□□ -0.08
TRIM6-208ENST00000506134 PTPRMP28827 1452 aa14.56□□□□□ -0.08
TRIM6-208ENST00000506134 LMTK2Q8IWU2 1503 aa14.56□□□□□ -0.08
TRIM6-208ENST00000506134 PKD2Q13563 968 aa14.56□□□□□ -0.08
TRIM6-208ENST00000506134 PPP4R3CPQ6ZMV5 832 aa14.55□□□□□ -0.08
TRIM6-208ENST00000506134 ZC3H13Q5T200 1668 aaKnown RBP14.55□□□□□ -0.08
TRIM6-208ENST00000506134 CFAP65Q6ZU64 1925 aaKnown RBP14.54□□□□□ -0.08
TRIM6-208ENST00000506134 CAMSAP1Q5T5Y3 1602 aa14.54□□□□□ -0.08
TRIM6-208ENST00000506134 NPATQ14207 1427 aa14.54□□□□□ -0.08
TRIM6-208ENST00000506134 SCAF1Q9H7N4 1312 aaKnown RBP14.54□□□□□ -0.08
TRIM6-208ENST00000506134 MROH2AA6NES4 1674 aa14.53□□□□□ -0.08
TRIM6-208ENST00000506134 C3P01024 1663 aa14.53□□□□□ -0.08
TRIM6-208ENST00000506134 ARHGAP31Q2M1Z3 1444 aa14.53□□□□□ -0.08
TRIM6-208ENST00000506134 TET3O43151 1660 aa14.53□□□□□ -0.08
TRIM6-208ENST00000506134 EFCAB6Q5THR3 1501 aa14.51□□□□□ -0.09
TRIM6-208ENST00000506134 E9PCH4 1651 aa14.5□□□□□ -0.09
TRIM6-208ENST00000506134 DMRT2Q9Y5R5 561 aa14.47□□□□□ -0.09
TRIM6-208ENST00000506134 ERVK-7P63135 1459 aa14.47□□□□□ -0.09
TRIM6-208ENST00000506134 RPRD2Q5VT52 1461 aaKnown RBP14.47□□□□□ -0.09
TRIM6-208ENST00000506134 TNRQ92752 1358 aa14.46□□□□□ -0.09
TRIM6-208ENST00000506134 NOS1P29475 1434 aa14.46□□□□□ -0.09
TRIM6-208ENST00000506134 PREX1Q8TCU6 1659 aa14.46□□□□□ -0.1
TRIM6-208ENST00000506134 DHX57Q6P158 1386 aaKnown RBP14.45□□□□□ -0.1
TRIM6-208ENST00000506134 PLA2R1Q13018 1463 aa14.45□□□□□ -0.1
TRIM6-208ENST00000506134 SPATA31D1Q6ZQQ2 1576 aa14.45□□□□□ -0.1
TRIM6-208ENST00000506134 IDI1Q13907 227 aa14.45□□□□□ -0.1
TRIM6-208ENST00000506134 PTPRTO14522 1441 aa14.44□□□□□ -0.1
TRIM6-208ENST00000506134 SETD1BQ9UPS6 1966 aaKnown RBP14.44□□□□□ -0.1
TRIM6-208ENST00000506134 SYNMO15061 1565 aa14.42□□□□□ -0.1
TRIM6-208ENST00000506134 SLC52A1Q9NWF4 448 aa14.42□□□□□ -0.1
TRIM6-208ENST00000506134 ANKRD30BQ9BXX2 1392 aa14.41□□□□□ -0.1
TRIM6-208ENST00000506134 UGGT1Q9NYU2 1555 aa14.41□□□□□ -0.1
TRIM6-208ENST00000506134 SPHKAPQ2M3C7 1700 aa14.4□□□□□ -0.1
TRIM6-208ENST00000506134 CHGAP10645 457 aaKnown RBP14.38□□□□□ -0.11
TRIM6-208ENST00000506134 TRPM2O94759 1503 aa14.37□□□□□ -0.11
TRIM6-208ENST00000506134 SIN3AQ96ST3 1273 aa14.37□□□□□ -0.11
TRIM6-208ENST00000506134 STAG3Q9UJ98 1225 aa14.37□□□□□ -0.11
TRIM6-208ENST00000506134 NLRP1Q9C000 1473 aa14.37□□□□□ -0.11
TRIM6-208ENST00000506134 UHRF1BP1Q6BDS2 1440 aa14.37□□□□□ -0.11
TRIM6-208ENST00000506134 MYO3AQ8NEV4 1616 aa14.36□□□□□ -0.11
TRIM6-208ENST00000506134 A2ML1A8K2U0 1454 aa14.36□□□□□ -0.11
TRIM6-208ENST00000506134 PIK3C2BO00750 1634 aa14.35□□□□□ -0.11
TRIM6-208ENST00000506134 CLTCL1P53675 1640 aa14.35□□□□□ -0.11
TRIM6-208ENST00000506134 HSPA2P54652 639 aa14.35□□□□□ -0.11
TRIM6-208ENST00000506134 CCER1Q8TC90 406 aaPredicted RBP14.35□□□□□ -0.11
TRIM6-208ENST00000506134 CCDC144AA2RUR9 1427 aa14.35□□□□□ -0.11
TRIM6-208ENST00000506134 THEMISQ8N1K5 641 aaPredicted RBP14.34□□□□□ -0.11
TRIM6-208ENST00000506134 NEUROD1Q13562 356 aa14.34□□□□□ -0.11
TRIM6-208ENST00000506134 LMTK3Q96Q04 1460 aa14.33□□□□□ -0.12
TRIM6-208ENST00000506134 CEP170BQ9Y4F5 1589 aaPredicted RBP14.33□□□□□ -0.12
TRIM6-208ENST00000506134 RGL3Q3MIN7 710 aa14.33□□□□□ -0.12
TRIM6-208ENST00000506134 TMEM131LA2VDJ0 1609 aa14.31□□□□□ -0.12
TRIM6-208ENST00000506134 ZNF326Q5BKZ1 582 aaKnown RBP14.31□□□□□ -0.12
TRIM6-208ENST00000506134 UBR1Q8IWV7 1749 aa14.3□□□□□ -0.12
TRIM6-208ENST00000506134 ZNF142P52746 1687 aaPredicted RBP14.3□□□□□ -0.12
TRIM6-208ENST00000506134 NUTM2DQ5VT03 806 aaPredicted RBP14.3□□□□□ -0.12
TRIM6-208ENST00000506134 KIF1BO60333 1816 aa14.3□□□□□ -0.12
TRIM6-208ENST00000506134 MYO5BQ9ULV0 1848 aa14.3□□□□□ -0.12
Retrieved 100 of 20,778 RNA–protein pairs in 14.4 ms