RNA–Protein interactions for RNA: ENST00000506065.1

PRDM5-208, Transcript of PR/SET domain 5, humanhuman

TSL 5

Gene PRDM5, Length 696 nt, Biotype processed transcript, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PRDM5-208ENST00000506065 FECHP22830 423 aa13.08□□□□□ -0.32
PRDM5-208ENST00000506065 PTGDRQ13258 359 aa13.07□□□□□ -0.32
PRDM5-208ENST00000506065 PCMTD1Q96MG8 357 aaPredicted RBP13.07□□□□□ -0.32
PRDM5-208ENST00000506065 ARID3AQ99856 593 aa13.06□□□□□ -0.32
PRDM5-208ENST00000506065 PODXL2Q9NZ53 605 aa13.06□□□□□ -0.32
PRDM5-208ENST00000506065 EVI5O60447 810 aa13.05□□□□□ -0.32
PRDM5-208ENST00000506065 GIGYF2Q6Y7W6 1299 aaKnown RBP13.05□□□□□ -0.32
PRDM5-208ENST00000506065 APBB1O00213 710 aa12.99□□□□□ -0.33
PRDM5-208ENST00000506065 CLCN1P35523 988 aa12.98□□□□□ -0.33
PRDM5-208ENST00000506065 C1orf115Q9H7X2 142 aa12.98□□□□□ -0.33
PRDM5-208ENST00000506065 MS4A1P11836 297 aa12.97□□□□□ -0.33
PRDM5-208ENST00000506065 PRIM1P49642 420 aaKnown RBP12.97□□□□□ -0.33
PRDM5-208ENST00000506065 TMEM92Q6UXU6 159 aa12.97□□□□□ -0.33
PRDM5-208ENST00000506065 ARID3CA6NKF2 412 aa12.96□□□□□ -0.33
PRDM5-208ENST00000506065 ONECUT3O60422 494 aaPredicted RBP12.96□□□□□ -0.33
PRDM5-208ENST00000506065 A6NJR5 290 aa12.95□□□□□ -0.34
PRDM5-208ENST00000506065 SH3D19Q5HYK7 790 aa12.95□□□□□ -0.34
PRDM5-208ENST00000506065 PTCD2Q8WV60 388 aaKnown RBP12.94□□□□□ -0.34
PRDM5-208ENST00000506065 EPAS1Q99814 870 aa12.94□□□□□ -0.34
PRDM5-208ENST00000506065 EN1Q05925 392 aaPredicted RBP12.93□□□□□ -0.34
PRDM5-208ENST00000506065 MMRN1Q13201 1228 aa12.93□□□□□ -0.34
PRDM5-208ENST00000506065 GPCPD1Q9NPB8 672 aa12.93□□□□□ -0.34
PRDM5-208ENST00000506065 SNPHO15079 494 aa12.92□□□□□ -0.34
PRDM5-208ENST00000506065 SPNS2Q8IVW8 549 aa12.92□□□□□ -0.34
PRDM5-208ENST00000506065 EIF2AK3Q9NZJ5 1116 aaKnown RBP12.92□□□□□ -0.34
PRDM5-208ENST00000506065 MAP3K7O43318 606 aa12.91□□□□□ -0.34
PRDM5-208ENST00000506065 PHF14O94880 888 aa12.91□□□□□ -0.34
PRDM5-208ENST00000506065 REPIN1Q9BWE0 567 aaKnown RBP12.91□□□□□ -0.34
PRDM5-208ENST00000506065 MARVELD3Q96A59 401 aa12.9□□□□□ -0.34
PRDM5-208ENST00000506065 ANO8Q9HCE9 1232 aaPredicted RBP12.9□□□□□ -0.34
PRDM5-208ENST00000506065 TRAK2O60296 914 aa12.88□□□□□ -0.35
PRDM5-208ENST00000506065 MDM2Q00987 491 aaPredicted RBP12.88□□□□□ -0.35
PRDM5-208ENST00000506065 TMUB1Q9BVT8 246 aa12.88□□□□□ -0.35
PRDM5-208ENST00000506065 CDHR5Q9HBB8 845 aa12.88□□□□□ -0.35
PRDM5-208ENST00000506065 ATP1B4Q9UN42 357 aaPredicted RBP12.88□□□□□ -0.35
PRDM5-208ENST00000506065 TRIM26Q12899 539 aaPredicted RBP12.87□□□□□ -0.35
PRDM5-208ENST00000506065 MCM6Q14566 821 aa12.87□□□□□ -0.35
PRDM5-208ENST00000506065 SKIV2LQ15477 1246 aaKnown RBP12.87□□□□□ -0.35
PRDM5-208ENST00000506065 CLUAP1Q96AJ1 413 aa12.87□□□□□ -0.35
PRDM5-208ENST00000506065 SLC34A2O95436 690 aa12.86□□□□□ -0.35
PRDM5-208ENST00000506065 SSTR3P32745 418 aaPredicted RBP12.86□□□□□ -0.35
PRDM5-208ENST00000506065 NPDC1Q9NQX5 325 aaPredicted RBP12.86□□□□□ -0.35
PRDM5-208ENST00000506065 C3orf67Q6ZVT6 689 aa12.85□□□□□ -0.35
PRDM5-208ENST00000506065 RBM33Q96EV2 1170 aaKnown RBP12.83□□□□□ -0.36
PRDM5-208ENST00000506065 TYW1BQ6NUM6 668 aa12.82□□□□□ -0.36
PRDM5-208ENST00000506065 CCDC82Q8N4S0 544 aa12.82□□□□□ -0.36
PRDM5-208ENST00000506065 BEGAINQ9BUH8 593 aa12.82□□□□□ -0.36
PRDM5-208ENST00000506065 RAD21O60216 631 aa12.81□□□□□ -0.36
PRDM5-208ENST00000506065 OATP04181 439 aa12.81□□□□□ -0.36
PRDM5-208ENST00000506065 RANGAP1P46060 587 aaPredicted RBP12.81□□□□□ -0.36
PRDM5-208ENST00000506065 FBXW7Q969H0 707 aa12.8□□□□□ -0.36
PRDM5-208ENST00000506065 PDIA4P13667 645 aaKnown RBP12.79□□□□□ -0.36
PRDM5-208ENST00000506065 PROSER2Q86WR7 435 aaPredicted RBP12.79□□□□□ -0.36
PRDM5-208ENST00000506065 PCDHGA10Q9Y5H3 936 aa12.79□□□□□ -0.36
PRDM5-208ENST00000506065 TSR1Q2NL82 804 aaKnown RBP12.78□□□□□ -0.36
PRDM5-208ENST00000506065 CERKQ8TCT0 537 aa12.78□□□□□ -0.36
PRDM5-208ENST00000506065 PHOX2BQ99453 314 aa12.78□□□□□ -0.36
PRDM5-208ENST00000506065 FAM217BQ9NTX9 383 aaPredicted RBP12.78□□□□□ -0.36
PRDM5-208ENST00000506065 EMP3P54852 163 aa12.76□□□□□ -0.37
PRDM5-208ENST00000506065 METTL3Q86U44 580 aaKnown RBP12.76□□□□□ -0.37
PRDM5-208ENST00000506065 HRCP23327 699 aa12.74□□□□□ -0.37
PRDM5-208ENST00000506065 JPH4Q96JJ6 628 aa12.74□□□□□ -0.37
PRDM5-208ENST00000506065 POLR3EQ9NVU0 708 aa12.74□□□□□ -0.37
PRDM5-208ENST00000506065 DIXDC1Q155Q3 683 aa12.73□□□□□ -0.37
PRDM5-208ENST00000506065 ZBTB7CA1YPR0 619 aa12.72□□□□□ -0.37
PRDM5-208ENST00000506065 SPDYE5A6NIY4 337 aa12.72□□□□□ -0.37
PRDM5-208ENST00000506065 PROCA1Q8NCQ7 364 aaPredicted RBP12.72□□□□□ -0.37
PRDM5-208ENST00000506065 CCDC97Q96F63 343 aaPredicted RBP12.72□□□□□ -0.37
PRDM5-208ENST00000506065 PCDHGA4Q9Y5G9 962 aa12.72□□□□□ -0.37
PRDM5-208ENST00000506065 MYSM1Q5VVJ2 828 aa12.71□□□□□ -0.37
PRDM5-208ENST00000506065 CLK2P49760 499 aaKnown RBP12.7□□□□□ -0.38
PRDM5-208ENST00000506065 PADI6Q6TGC4 694 aa12.7□□□□□ -0.38
PRDM5-208ENST00000506065 PXYLP1Q8TE99 480 aa12.7□□□□□ -0.38
PRDM5-208ENST00000506065 GNL3Q9BVP2 549 aaKnown RBP eCLIP12.7□□□□□ -0.38
PRDM5-208ENST00000506065 RBM27Q9P2N5 1060 aaKnown RBP12.7□□□□□ -0.38
PRDM5-208ENST00000506065 SERPINA10Q9UK55 444 aa12.7□□□□□ -0.38
PRDM5-208ENST00000506065 ZNF777Q9ULD5 760 aaPredicted RBP12.7□□□□□ -0.38
PRDM5-208ENST00000506065 ADGRG1Q9Y653 693 aa12.7□□□□□ -0.38
PRDM5-208ENST00000506065 POTEB3A0JP26 581 aa12.69□□□□□ -0.38
PRDM5-208ENST00000506065 FAM161AQ3B820 660 aa12.69□□□□□ -0.38
PRDM5-208ENST00000506065 POTEBQ6S5H4 581 aa12.69□□□□□ -0.38
PRDM5-208ENST00000506065 BANK1Q8NDB2 785 aa12.68□□□□□ -0.38
PRDM5-208ENST00000506065 FNBP4Q8N3X1 1017 aaPredicted RBP12.67□□□□□ -0.38
PRDM5-208ENST00000506065 POM121Q96HA1 1249 aa12.67□□□□□ -0.38
PRDM5-208ENST00000506065 HS3ST6Q96QI5 342 aa12.67□□□□□ -0.38
PRDM5-208ENST00000506065 KRTAP3-3Q9BYR6 98 aa12.67□□□□□ -0.38
PRDM5-208ENST00000506065 KRTAP3-2Q9BYR7 98 aa12.67□□□□□ -0.38
PRDM5-208ENST00000506065 FAM205CA6NFA0 338 aa12.66□□□□□ -0.38
PRDM5-208ENST00000506065 C6orf132Q5T0Z8 1188 aa12.66□□□□□ -0.38
PRDM5-208ENST00000506065 NLRP7Q8WX94 980 aa12.66□□□□□ -0.38
PRDM5-208ENST00000506065 RBM46Q8TBY0 533 aaKnown RBP12.65□□□□□ -0.38
PRDM5-208ENST00000506065 TBC1D2Q9BYX2 928 aa12.65□□□□□ -0.38
PRDM5-208ENST00000506065 FOSBP53539 338 aa12.64□□□□□ -0.39
PRDM5-208ENST00000506065 RFC5P40937 340 aa12.63□□□□□ -0.39
PRDM5-208ENST00000506065 TMEM259Q4ZIN3 620 aa12.63□□□□□ -0.39
PRDM5-208ENST00000506065 ZDHHC16Q969W1 377 aa12.63□□□□□ -0.39
PRDM5-208ENST00000506065 TTC13Q8NBP0 860 aa12.62□□□□□ -0.39
PRDM5-208ENST00000506065 COG6Q9Y2V7 657 aa12.62□□□□□ -0.39
PRDM5-208ENST00000506065 WWC1Q8IX03 1113 aa12.6□□□□□ -0.39
PRDM5-208ENST00000506065 ZNF454Q8N9F8 522 aa12.6□□□□□ -0.39
Retrieved 100 of 20,778 RNA–protein pairs in 23.2 ms