RNA–Protein interactions for RNA: ENST00000505728.1

COL4A5-208, Transcript of collagen type IV alpha 5 chain, humanhuman

TSL 3

Gene COL4A5, Length 537 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COL4A5-208ENST00000505728 SLC4A1APQ9BWU0 796 aaKnown RBP11.61□□□□□ -0.55
COL4A5-208ENST00000505728 KDM5CP41229 1560 aa11.6□□□□□ -0.55
COL4A5-208ENST00000505728 RTEL1-TNFRSF6BF6WH68 1400 aa11.6□□□□□ -0.55
COL4A5-208ENST00000505728 ATP10AO60312 1499 aa11.59□□□□□ -0.55
COL4A5-208ENST00000505728 TONSLQ96HA7 1378 aa11.59□□□□□ -0.55
COL4A5-208ENST00000505728 ANKRD30BQ9BXX2 1392 aa11.59□□□□□ -0.55
COL4A5-208ENST00000505728 PLPPR3Q6T4P5 718 aa11.59□□□□□ -0.55
COL4A5-208ENST00000505728 PLXNC1O60486 1568 aa11.58□□□□□ -0.55
COL4A5-208ENST00000505728 PZPP20742 1482 aa11.58□□□□□ -0.56
COL4A5-208ENST00000505728 HSPA2P54652 639 aa11.58□□□□□ -0.56
COL4A5-208ENST00000505728 MLECQ14165 292 aa11.58□□□□□ -0.56
COL4A5-208ENST00000505728 DIP2CQ9Y2E4 1556 aa11.58□□□□□ -0.56
COL4A5-208ENST00000505728 ABCA6Q8N139 1617 aa11.57□□□□□ -0.56
COL4A5-208ENST00000505728 KDM5DQ9BY66 1539 aa11.57□□□□□ -0.56
COL4A5-208ENST00000505728 PREX1Q8TCU6 1659 aa11.57□□□□□ -0.56
COL4A5-208ENST00000505728 FBXO41Q8TF61 875 aa11.57□□□□□ -0.56
COL4A5-208ENST00000505728 TRAPPC8Q9Y2L5 1435 aa11.57□□□□□ -0.56
COL4A5-208ENST00000505728 SPAG9O60271 1321 aaKnown RBP11.57□□□□□ -0.56
COL4A5-208ENST00000505728 ZNF518AQ6AHZ1 1483 aa11.57□□□□□ -0.56
COL4A5-208ENST00000505728 NUP155O75694 1391 aa11.56□□□□□ -0.56
COL4A5-208ENST00000505728 DUOX2Q9NRD8 1548 aa11.56□□□□□ -0.56
COL4A5-208ENST00000505728 DIEXFQ68CQ4 756 aaKnown RBP11.55□□□□□ -0.56
COL4A5-208ENST00000505728 AFAP1Q8N556 730 aa11.55□□□□□ -0.56
COL4A5-208ENST00000505728 ERBINQ96RT1 1412 aa11.54□□□□□ -0.56
COL4A5-208ENST00000505728 PKD2Q13563 968 aa11.54□□□□□ -0.56
COL4A5-208ENST00000505728 STRCQ7RTU9 1775 aa11.54□□□□□ -0.56
COL4A5-208ENST00000505728 KIDINS220Q9ULH0 1771 aa11.54□□□□□ -0.56
COL4A5-208ENST00000505728 REREQ9P2R6 1566 aa11.54□□□□□ -0.56
COL4A5-208ENST00000505728 C3P01024 1663 aa11.53□□□□□ -0.56
COL4A5-208ENST00000505728 SETD1BQ9UPS6 1966 aaKnown RBP11.52□□□□□ -0.56
COL4A5-208ENST00000505728 RPRD2Q5VT52 1461 aaKnown RBP11.51□□□□□ -0.57
COL4A5-208ENST00000505728 MLH3Q9UHC1 1453 aa11.51□□□□□ -0.57
COL4A5-208ENST00000505728 CEBPAP49715 358 aaPredicted RBP11.51□□□□□ -0.57
COL4A5-208ENST00000505728 UNC13BO14795 1591 aa11.5□□□□□ -0.57
COL4A5-208ENST00000505728 AGLP35573 1532 aa11.49□□□□□ -0.57
COL4A5-208ENST00000505728 ATP7AQ04656 1500 aa11.49□□□□□ -0.57
COL4A5-208ENST00000505728 L3MBTL2Q969R5 705 aa11.48□□□□□ -0.57
COL4A5-208ENST00000505728 DHX29Q7Z478 1369 aaKnown RBP11.48□□□□□ -0.57
COL4A5-208ENST00000505728 FAM135AQ9P2D6 1515 aa11.48□□□□□ -0.57
COL4A5-208ENST00000505728 INO80Q9ULG1 1556 aaPredicted RBP11.48□□□□□ -0.57
COL4A5-208ENST00000505728 MYT1LQ9UL68 1186 aa11.47□□□□□ -0.57
COL4A5-208ENST00000505728 IQGAP3Q86VI3 1631 aa11.46□□□□□ -0.57
COL4A5-208ENST00000505728 GRWD1Q9BQ67 446 aaKnown RBP eCLIP11.46□□□□□ -0.57
COL4A5-208ENST00000505728 UHRF1BP1Q6BDS2 1440 aa11.44□□□□□ -0.58
COL4A5-208ENST00000505728 MROH2AA6NES4 1674 aa11.44□□□□□ -0.58
COL4A5-208ENST00000505728 CERKQ8TCT0 537 aa11.44□□□□□ -0.58
COL4A5-208ENST00000505728 KANK1Q14678 1352 aa11.43□□□□□ -0.58
COL4A5-208ENST00000505728 EIF2AK4Q9P2K8 1649 aaKnown RBP11.43□□□□□ -0.58
COL4A5-208ENST00000505728 CLTCQ00610 1675 aaKnown RBP11.42□□□□□ -0.58
COL4A5-208ENST00000505728 A2MP01023 1474 aa11.41□□□□□ -0.58
COL4A5-208ENST00000505728 KIF3BO15066 747 aa11.41□□□□□ -0.58
COL4A5-208ENST00000505728 DEPDC5O75140 1603 aa11.41□□□□□ -0.58
COL4A5-208ENST00000505728 CCDC144AA2RUR9 1427 aa11.39□□□□□ -0.59
COL4A5-208ENST00000505728 NBPF8Q3BBV2 869 aa11.39□□□□□ -0.59
COL4A5-208ENST00000505728 VWDEQ8N2E2 1590 aa11.39□□□□□ -0.59
COL4A5-208ENST00000505728 PLA2R1Q13018 1463 aa11.38□□□□□ -0.59
COL4A5-208ENST00000505728 CNTLNQ9NXG0 1405 aa11.38□□□□□ -0.59
COL4A5-208ENST00000505728 EIF4G2P78344 907 aaKnown RBP eCLIP11.38□□□□□ -0.59
COL4A5-208ENST00000505728 ZNF142P52746 1687 aaPredicted RBP11.37□□□□□ -0.59
COL4A5-208ENST00000505728 PTPRTO14522 1441 aa11.37□□□□□ -0.59
COL4A5-208ENST00000505728 LTBP4Q8N2S1 1624 aa11.37□□□□□ -0.59
COL4A5-208ENST00000505728 MYO3AQ8NEV4 1616 aa11.37□□□□□ -0.59
COL4A5-208ENST00000505728 TET3O43151 1660 aa11.36□□□□□ -0.59
COL4A5-208ENST00000505728 CAMSAP1Q5T5Y3 1602 aa11.36□□□□□ -0.59
COL4A5-208ENST00000505728 ESF1Q9H501 851 aaKnown RBP11.36□□□□□ -0.59
COL4A5-208ENST00000505728 DMRT2Q9Y5R5 561 aa11.36□□□□□ -0.59
COL4A5-208ENST00000505728 NPATQ14207 1427 aa11.35□□□□□ -0.59
COL4A5-208ENST00000505728 PRDM15P57071 1507 aaPredicted RBP11.35□□□□□ -0.59
COL4A5-208ENST00000505728 HSPA5P11021 654 aaKnown RBP11.35□□□□□ -0.59
COL4A5-208ENST00000505728 STAC3Q96MF2 364 aa11.35□□□□□ -0.59
COL4A5-208ENST00000505728 ZMYM3Q14202 1370 aa11.35□□□□□ -0.59
COL4A5-208ENST00000505728 RNF17Q9BXT8 1623 aaKnown RBP11.35□□□□□ -0.59
COL4A5-208ENST00000505728 LMTK2Q8IWU2 1503 aa11.35□□□□□ -0.59
COL4A5-208ENST00000505728 E9PCH4 1651 aa11.34□□□□□ -0.59
COL4A5-208ENST00000505728 MROH1Q8NDA8 1641 aa11.34□□□□□ -0.59
COL4A5-208ENST00000505728 MIER1Q8N108 512 aa11.33□□□□□ -0.6
COL4A5-208ENST00000505728 DCAF11Q8TEB1 546 aa11.33□□□□□ -0.6
COL4A5-208ENST00000505728 CEP170BQ9Y4F5 1589 aaPredicted RBP11.32□□□□□ -0.6
COL4A5-208ENST00000505728 TRPM2O94759 1503 aa11.31□□□□□ -0.6
COL4A5-208ENST00000505728 HIRIP3Q9BW71 556 aaPredicted RBP11.31□□□□□ -0.6
COL4A5-208ENST00000505728 KDM2AQ9Y2K7 1162 aa11.31□□□□□ -0.6
COL4A5-208ENST00000505728 SPHKAPQ2M3C7 1700 aa11.31□□□□□ -0.6
COL4A5-208ENST00000505728 DDX10Q13206 875 aaKnown RBP11.3□□□□□ -0.6
COL4A5-208ENST00000505728 GGT6Q6P531 493 aa11.3□□□□□ -0.6
COL4A5-208ENST00000505728 RALGAPBQ86X10 1494 aa11.3□□□□□ -0.6
COL4A5-208ENST00000505728 SPATA31E1Q6ZUB1 1445 aa11.29□□□□□ -0.6
COL4A5-208ENST00000505728 RGL3Q3MIN7 710 aa11.29□□□□□ -0.6
COL4A5-208ENST00000505728 NCKAP5LQ9HCH0 1330 aa11.29□□□□□ -0.6
COL4A5-208ENST00000505728 NEURL4Q96JN8 1562 aa11.28□□□□□ -0.6
COL4A5-208ENST00000505728 ZNF326Q5BKZ1 582 aaKnown RBP11.28□□□□□ -0.6
COL4A5-208ENST00000505728 PPP6R1Q9UPN7 881 aa11.28□□□□□ -0.6
COL4A5-208ENST00000505728 POLR1AO95602 1720 aaPredicted RBP11.28□□□□□ -0.6
COL4A5-208ENST00000505728 EFCAB6Q5THR3 1501 aa11.28□□□□□ -0.6
COL4A5-208ENST00000505728 WASHC2CQ9Y4E1 1318 aa11.28□□□□□ -0.6
COL4A5-208ENST00000505728 PRAG1Q86YV5 1406 aa11.27□□□□□ -0.6
COL4A5-208ENST00000505728 IQSEC2Q5JU85 1478 aa11.27□□□□□ -0.6
COL4A5-208ENST00000505728 CEP152O94986 1710 aa11.27□□□□□ -0.61
COL4A5-208ENST00000505728 CARD11Q9BXL7 1154 aa11.26□□□□□ -0.61
COL4A5-208ENST00000505728 ARHGAP31Q2M1Z3 1444 aa11.26□□□□□ -0.61
COL4A5-208ENST00000505728 ABCC3O15438 1527 aa11.25□□□□□ -0.61
Retrieved 100 of 20,778 RNA–protein pairs in 21.7 ms