RNA–Protein interactions for RNA: ENST00000505526.1

PDCD6-203, Transcript of programmed cell death 6, humanhuman

TSL 1 (best)

Gene PDCD6, Length 1,484 nt, Biotype nonsense mediated decay, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PDCD6-203ENST00000505526 KIF3BO15066 747 aa24.69■■□□□ 1.54
PDCD6-203ENST00000505526 FBXO31Q5XUX0 539 aaPredicted RBP24.69■■□□□ 1.54
PDCD6-203ENST00000505526 TNRQ92752 1358 aa24.68■■□□□ 1.54
PDCD6-203ENST00000505526 VPS8Q8N3P4 1428 aa24.66■■□□□ 1.54
PDCD6-203ENST00000505526 POLR1AO95602 1720 aaPredicted RBP24.66■■□□□ 1.54
PDCD6-203ENST00000505526 PZPP20742 1482 aa24.65■■□□□ 1.54
PDCD6-203ENST00000505526 SCAF1Q9H7N4 1312 aaKnown RBP24.65■■□□□ 1.54
PDCD6-203ENST00000505526 NEURL4Q96JN8 1562 aa24.65■■□□□ 1.54
PDCD6-203ENST00000505526 KDM5DQ9BY66 1539 aa24.64■■□□□ 1.54
PDCD6-203ENST00000505526 CPS1P31327 1500 aa24.64■■□□□ 1.53
PDCD6-203ENST00000505526 CCDC141Q6ZP82 1450 aa24.64■■□□□ 1.53
PDCD6-203ENST00000505526 WASHC2CQ9Y4E1 1318 aa24.63■■□□□ 1.53
PDCD6-203ENST00000505526 PIP4K2BP78356 416 aa24.63■■□□□ 1.53
PDCD6-203ENST00000505526 FAM135AQ9P2D6 1515 aa24.62■■□□□ 1.53
PDCD6-203ENST00000505526 SHANK2Q9UPX8 1470 aa24.62■■□□□ 1.53
PDCD6-203ENST00000505526 TOM1O60784 492 aa24.62■■□□□ 1.53
PDCD6-203ENST00000505526 HSPA1LP34931 641 aa24.62■■□□□ 1.53
PDCD6-203ENST00000505526 CAMSAP2Q08AD1 1489 aa24.61■■□□□ 1.53
PDCD6-203ENST00000505526 RSPH4AQ5TD94 716 aa24.6■■□□□ 1.53
PDCD6-203ENST00000505526 ANKLE2Q86XL3 938 aa24.6■■□□□ 1.53
PDCD6-203ENST00000505526 DROSHAQ9NRR4 1374 aaKnown RBP eCLIP24.6■■□□□ 1.532e-7■■■■■ 43.8
PDCD6-203ENST00000505526 THEMISQ8N1K5 641 aaPredicted RBP24.58■■□□□ 1.53
PDCD6-203ENST00000505526 MIA2Q96PC5 1412 aa24.58■■□□□ 1.53
PDCD6-203ENST00000505526 NCOA2Q15596 1464 aa24.58■■□□□ 1.52
PDCD6-203ENST00000505526 NLRP1Q9C000 1473 aa24.56■■□□□ 1.52
PDCD6-203ENST00000505526 UGGT1Q9NYU2 1555 aa24.55■■□□□ 1.52
PDCD6-203ENST00000505526 MED1Q15648 1581 aaPredicted RBP24.54■■□□□ 1.52
PDCD6-203ENST00000505526 VWDEQ8N2E2 1590 aa24.54■■□□□ 1.52
PDCD6-203ENST00000505526 NPHP4O75161 1426 aaPredicted RBP24.53■■□□□ 1.52
PDCD6-203ENST00000505526 TSPY4P0CV99 314 aa24.52■■□□□ 1.52
PDCD6-203ENST00000505526 TSPY10P0CW01 314 aa24.52■■□□□ 1.52
PDCD6-203ENST00000505526 MED14O60244 1454 aa24.52■■□□□ 1.52
PDCD6-203ENST00000505526 DEPDC5O75140 1603 aa24.51■■□□□ 1.51
PDCD6-203ENST00000505526 ARHGEF5Q12774 1597 aa24.51■■□□□ 1.51
PDCD6-203ENST00000505526 IQGAP1P46940 1657 aa24.45■■□□□ 1.5
PDCD6-203ENST00000505526 ALKQ9UM73 1620 aa24.45■■□□□ 1.5
PDCD6-203ENST00000505526 RNF17Q9BXT8 1623 aaKnown RBP24.44■■□□□ 1.5
PDCD6-203ENST00000505526 ABCC3O15438 1527 aa24.43■■□□□ 1.5
PDCD6-203ENST00000505526 ZC3H13Q5T200 1668 aaKnown RBP24.41■■□□□ 1.5
PDCD6-203ENST00000505526 APLP2Q06481 763 aa24.39■■□□□ 1.5
PDCD6-203ENST00000505526 PHF23Q9BUL5 403 aaPredicted RBP24.39■■□□□ 1.5
PDCD6-203ENST00000505526 MAST1Q9Y2H9 1570 aa24.39■■□□□ 1.5
PDCD6-203ENST00000505526 ERVK-7P63135 1459 aa24.39■■□□□ 1.49
PDCD6-203ENST00000505526 LRRC7Q96NW7 1537 aa24.38■■□□□ 1.49
PDCD6-203ENST00000505526 STRCP1A6NGW2 1772 aa24.38■■□□□ 1.49
PDCD6-203ENST00000505526 EIF2AK4Q9P2K8 1649 aaKnown RBP24.37■■□□□ 1.49
PDCD6-203ENST00000505526 LRRC9Q6ZRR7 1453 aa24.37■■□□□ 1.49
PDCD6-203ENST00000505526 SENP3Q9H4L4 574 aaPredicted RBP24.35■■□□□ 1.49
PDCD6-203ENST00000505526 SYNMO15061 1565 aa24.34■■□□□ 1.49
PDCD6-203ENST00000505526 MROH1Q8NDA8 1641 aa24.34■■□□□ 1.49
PDCD6-203ENST00000505526 MAP3K1Q13233 1512 aa24.33■■□□□ 1.49
PDCD6-203ENST00000505526 UBR1Q8IWV7 1749 aa24.32■■□□□ 1.48
PDCD6-203ENST00000505526 CEP152O94986 1710 aa24.31■■□□□ 1.48
PDCD6-203ENST00000505526 SCAF11Q99590 1463 aaKnown RBP24.31■■□□□ 1.48
PDCD6-203ENST00000505526 DUOX2Q9NRD8 1548 aa24.28■■□□□ 1.48
PDCD6-203ENST00000505526 CFAP65Q6ZU64 1925 aaKnown RBP24.28■■□□□ 1.48
PDCD6-203ENST00000505526 LTKP29376 864 aa24.27■■□□□ 1.48
PDCD6-203ENST00000505526 KANK4Q5T7N3 995 aaPredicted RBP24.27■■□□□ 1.48
PDCD6-203ENST00000505526 TXNDC2Q86VQ3 553 aa24.26■■□□□ 1.47
PDCD6-203ENST00000505526 MYOM3Q5VTT5 1437 aa24.26■■□□□ 1.47
PDCD6-203ENST00000505526 ARHGAP23Q9P227 1491 aa24.25■■□□□ 1.47
PDCD6-203ENST00000505526 SLIT1O75093 1534 aa24.25■■□□□ 1.47
PDCD6-203ENST00000505526 PPARGC1BQ86YN6 1023 aaKnown RBP24.24■■□□□ 1.47
PDCD6-203ENST00000505526 ARHGAP31Q2M1Z3 1444 aa24.23■■□□□ 1.47
PDCD6-203ENST00000505526 EID1Q9Y6B2 187 aa24.22■■□□□ 1.47
PDCD6-203ENST00000505526 PRDM15P57071 1507 aaPredicted RBP24.21■■□□□ 1.47
PDCD6-203ENST00000505526 KIF15Q9NS87 1388 aa24.21■■□□□ 1.47
PDCD6-203ENST00000505526 RRP7BPQ9NSQ0 103 aa24.19■■□□□ 1.46
PDCD6-203ENST00000505526 ERBINQ96RT1 1412 aa24.18■■□□□ 1.46
PDCD6-203ENST00000505526 XIRP1Q702N8 1843 aaKnown RBP24.17■■□□□ 1.46
PDCD6-203ENST00000505526 GRWD1Q9BQ67 446 aaKnown RBP eCLIP24.17■■□□□ 1.469e-7■■■■□ 21.2
PDCD6-203ENST00000505526 PIK3C2BO00750 1634 aa24.16■■□□□ 1.46
PDCD6-203ENST00000505526 TMEM2Q9UHN6 1383 aa24.16■■□□□ 1.46
PDCD6-203ENST00000505526 ABCC5O15440 1437 aa24.15■■□□□ 1.46
PDCD6-203ENST00000505526 RGS17Q9UGC6 210 aaPredicted RBP24.15■■□□□ 1.46
PDCD6-203ENST00000505526 STAG3Q9UJ98 1225 aa24.15■■□□□ 1.46
PDCD6-203ENST00000505526 CROCC2H7BZ55 1655 aa24.13■■□□□ 1.45
PDCD6-203ENST00000505526 KANK1Q14678 1352 aa24.12■■□□□ 1.45
PDCD6-203ENST00000505526 FAM135BQ49AJ0 1406 aa24.12■■□□□ 1.45
PDCD6-203ENST00000505526 EFCAB6Q5THR3 1501 aa24.09■■□□□ 1.45
PDCD6-203ENST00000505526 TMEM94Q12767 1356 aa24.09■■□□□ 1.45
PDCD6-203ENST00000505526 IDI1Q13907 227 aa24.09■■□□□ 1.45
PDCD6-203ENST00000505526 PTPN23Q9H3S7 1636 aa24.09■■□□□ 1.45
PDCD6-203ENST00000505526 DAPK1P53355 1430 aa24.08■■□□□ 1.45
PDCD6-203ENST00000505526 KCNA6P17658 529 aa24.08■■□□□ 1.45
PDCD6-203ENST00000505526 KDM5AP29375 1690 aaKnown RBP24.08■■□□□ 1.44
PDCD6-203ENST00000505526 SLC26A8Q96RN1 970 aa24.06■■□□□ 1.44
PDCD6-203ENST00000505526 LMTK2Q8IWU2 1503 aa24.05■■□□□ 1.44
PDCD6-203ENST00000505526 PROSER2Q86WR7 435 aaPredicted RBP24.05■■□□□ 1.44
PDCD6-203ENST00000505526 TET3O43151 1660 aa24.04■■□□□ 1.44
PDCD6-203ENST00000505526 RBM33Q96EV2 1170 aaKnown RBP24.03■■□□□ 1.44
PDCD6-203ENST00000505526 ANKRD30AQ9BXX3 1397 aa24.02■■□□□ 1.44
PDCD6-203ENST00000505526 CHIC2Q9UKJ5 165 aa24.02■■□□□ 1.44
PDCD6-203ENST00000505526 ROBO1Q9Y6N7 1651 aa24.02■■□□□ 1.44
PDCD6-203ENST00000505526 NOS1P29475 1434 aa24■■□□□ 1.43
PDCD6-203ENST00000505526 FGD6Q6ZV73 1430 aa24■■□□□ 1.43
PDCD6-203ENST00000505526 POTEAQ6S8J7 498 aa24■■□□□ 1.43
PDCD6-203ENST00000505526 ADGRB3O60242 1522 aa23.98■■□□□ 1.43
PDCD6-203ENST00000505526 NKTRP30414 1462 aaKnown RBP23.97■■□□□ 1.43
PDCD6-203ENST00000505526 BCANQ96GW7 911 aa23.97■■□□□ 1.43
Retrieved 100 of 20,778 RNA–protein pairs in 15.9 ms