RNA–Protein interactions for RNA: ENST00000505397.1

LIN54-204, Transcript of lin-54 DREAM MuvB core complex component, humanhuman

APPRIS P1 TSL 5 BASIC

Gene LIN54, Length 2,742 nt, Biotype protein coding.

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LIN54-204ENST00000505397 C11orf95C9JLR9 678 aaPredicted RBP23.46■■□□□ 1.35
LIN54-204ENST00000505397 NBPF8Q3BBV2 869 aa23.46■■□□□ 1.35
LIN54-204ENST00000505397 AFAP1Q8N556 730 aa23.46■■□□□ 1.35
LIN54-204ENST00000505397 SCAPERQ9BY12 1400 aa23.45■■□□□ 1.34
LIN54-204ENST00000505397 RIMBP3CA6NJZ7 1639 aa23.45■■□□□ 1.34
LIN54-204ENST00000505397 RIMBP3BA6NNM3 1639 aa23.45■■□□□ 1.34
LIN54-204ENST00000505397 RIMBP3Q9UFD9 1639 aa23.45■■□□□ 1.34
LIN54-204ENST00000505397 POLR1AO95602 1720 aaPredicted RBP23.44■■□□□ 1.34
LIN54-204ENST00000505397 CD109Q6YHK3 1445 aa23.43■■□□□ 1.34
LIN54-204ENST00000505397 IQGAP3Q86VI3 1631 aa23.43■■□□□ 1.34
LIN54-204ENST00000505397 ATP7AQ04656 1500 aa23.43■■□□□ 1.34
LIN54-204ENST00000505397 INO80Q9ULG1 1556 aaPredicted RBP23.43■■□□□ 1.34
LIN54-204ENST00000505397 HNRNPUQ00839 825 aaKnown RBP eCLIP23.42■■□□□ 1.34
LIN54-204ENST00000505397 GRWD1Q9BQ67 446 aaKnown RBP eCLIP23.41■■□□□ 1.34
LIN54-204ENST00000505397 CYB5RLQ6IPT4 315 aa23.4■■□□□ 1.34
LIN54-204ENST00000505397 MYT1LQ9UL68 1186 aa23.39■■□□□ 1.34
LIN54-204ENST00000505397 MAGI2Q86UL8 1455 aa23.39■■□□□ 1.34
LIN54-204ENST00000505397 PRKRIP1Q9H875 184 aaPredicted RBP23.39■■□□□ 1.33
LIN54-204ENST00000505397 ZNF518AQ6AHZ1 1483 aa23.36■■□□□ 1.33
LIN54-204ENST00000505397 CCDC184Q52MB2 194 aa23.35■■□□□ 1.33
LIN54-204ENST00000505397 KIF7Q2M1P5 1343 aa23.33■■□□□ 1.33
LIN54-204ENST00000505397 CCDC144AA2RUR9 1427 aa23.3■■□□□ 1.32
LIN54-204ENST00000505397 KIDINS220Q9ULH0 1771 aa23.29■■□□□ 1.32
LIN54-204ENST00000505397 DEPDC5O75140 1603 aa23.29■■□□□ 1.32
LIN54-204ENST00000505397 EIF2AK4Q9P2K8 1649 aaKnown RBP23.29■■□□□ 1.32
LIN54-204ENST00000505397 POGZQ7Z3K3 1410 aa23.28■■□□□ 1.32
LIN54-204ENST00000505397 NEO1Q92859 1461 aa23.28■■□□□ 1.32
LIN54-204ENST00000505397 RBM19Q9Y4C8 960 aaKnown RBP23.27■■□□□ 1.32
LIN54-204ENST00000505397 KDM5CP41229 1560 aa23.26■■□□□ 1.31
LIN54-204ENST00000505397 ERICH6BQ5W0A0 696 aa23.26■■□□□ 1.31
LIN54-204ENST00000505397 MAP3K4Q9Y6R4 1608 aa23.26■■□□□ 1.31
LIN54-204ENST00000505397 DHX29Q7Z478 1369 aaKnown RBP23.25■■□□□ 1.31
LIN54-204ENST00000505397 ANP32EQ9BTT0 268 aa23.24■■□□□ 1.31
LIN54-204ENST00000505397 KANK1Q14678 1352 aa23.24■■□□□ 1.31
LIN54-204ENST00000505397 HECW2Q9P2P5 1572 aa23.24■■□□□ 1.31
LIN54-204ENST00000505397 ZNF326Q5BKZ1 582 aaKnown RBP23.23■■□□□ 1.31
LIN54-204ENST00000505397 GLI2P10070 1586 aa23.23■■□□□ 1.31
LIN54-204ENST00000505397 ZBED9Q6R2W3 1325 aa23.23■■□□□ 1.31
LIN54-204ENST00000505397 MRS2Q9HD23 443 aa23.22■■□□□ 1.31
LIN54-204ENST00000505397 BCORL1Q5H9F3 1711 aa23.21■■□□□ 1.31
LIN54-204ENST00000505397 KIF3BO15066 747 aa23.21■■□□□ 1.31
LIN54-204ENST00000505397 UHRF1BP1Q6BDS2 1440 aa23.21■■□□□ 1.31
LIN54-204ENST00000505397 E9PCH4 1651 aa23.2■■□□□ 1.31
LIN54-204ENST00000505397 TET3O43151 1660 aa23.2■■□□□ 1.31
LIN54-204ENST00000505397 ATP10AO60312 1499 aa23.2■■□□□ 1.3
LIN54-204ENST00000505397 PLA2R1Q13018 1463 aa23.2■■□□□ 1.3
LIN54-204ENST00000505397 MLH3Q9UHC1 1453 aa23.2■■□□□ 1.3
LIN54-204ENST00000505397 PRDM15P57071 1507 aaPredicted RBP23.19■■□□□ 1.3
LIN54-204ENST00000505397 A2MP01023 1474 aa23.18■■□□□ 1.3
LIN54-204ENST00000505397 ARID4BQ4LE39 1312 aaPredicted RBP23.18■■□□□ 1.3
LIN54-204ENST00000505397 USP47Q96K76 1375 aa23.18■■□□□ 1.3
LIN54-204ENST00000505397 FAM9BQ8IZU0 186 aa23.17■■□□□ 1.3
LIN54-204ENST00000505397 DIP2BQ9P265 1576 aa23.17■■□□□ 1.3
LIN54-204ENST00000505397 VWDEQ8N2E2 1590 aa23.16■■□□□ 1.3
LIN54-204ENST00000505397 DCAF11Q8TEB1 546 aa23.16■■□□□ 1.3
LIN54-204ENST00000505397 SPHKAPQ2M3C7 1700 aa23.15■■□□□ 1.3
LIN54-204ENST00000505397 RALGAPBQ86X10 1494 aa23.15■■□□□ 1.3
LIN54-204ENST00000505397 MROH1Q8NDA8 1641 aa23.15■■□□□ 1.3
LIN54-204ENST00000505397 KDM2AQ9Y2K7 1162 aa23.14■■□□□ 1.3
LIN54-204ENST00000505397 IRX6P78412 446 aaPredicted RBP23.14■■□□□ 1.29
LIN54-204ENST00000505397 ABCA6Q8N139 1617 aa23.13■■□□□ 1.29
LIN54-204ENST00000505397 RICTORQ6R327 1708 aa23.13■■□□□ 1.29
LIN54-204ENST00000505397 FAM69CQ0P6D2 419 aa23.12■■□□□ 1.29
LIN54-204ENST00000505397 TRPM2O94759 1503 aa23.12■■□□□ 1.29
LIN54-204ENST00000505397 RNF17Q9BXT8 1623 aaKnown RBP23.12■■□□□ 1.29
LIN54-204ENST00000505397 RAPGEF3O95398 923 aa23.1■■□□□ 1.29
LIN54-204ENST00000505397 RGL3Q3MIN7 710 aa23.1■■□□□ 1.29
LIN54-204ENST00000505397 PPP4R2Q9NY27 417 aa23.1■■□□□ 1.29
LIN54-204ENST00000505397 FRMPD1Q5SYB0 1578 aa23.09■■□□□ 1.29
LIN54-204ENST00000505397 TSPOAP1O95153 1857 aa23.08■■□□□ 1.29
LIN54-204ENST00000505397 CEP152O94986 1710 aa23.07■■□□□ 1.28
LIN54-204ENST00000505397 ROCK2O75116 1388 aaKnown RBP23.06■■□□□ 1.28
LIN54-204ENST00000505397 EFCAB6Q5THR3 1501 aa23.06■■□□□ 1.28
LIN54-204ENST00000505397 PTPRTO14522 1441 aa23.06■■□□□ 1.28
LIN54-204ENST00000505397 DIP2CQ9Y2E4 1556 aa23.05■■□□□ 1.28
LIN54-204ENST00000505397 CARD11Q9BXL7 1154 aa23.05■■□□□ 1.28
LIN54-204ENST00000505397 PRAG1Q86YV5 1406 aa23.05■■□□□ 1.28
LIN54-204ENST00000505397 TRPM1Q7Z4N2 1603 aa23.04■■□□□ 1.28
LIN54-204ENST00000505397 LMTK2Q8IWU2 1503 aa23.03■■□□□ 1.28
LIN54-204ENST00000505397 SMG6Q86US8 1419 aaKnown RBP23.03■■□□□ 1.28
LIN54-204ENST00000505397 CLTCL1P53675 1640 aa23.03■■□□□ 1.28
LIN54-204ENST00000505397 PPRC1Q5VV67 1664 aaKnown RBP23.03■■□□□ 1.28
LIN54-204ENST00000505397 FANCIQ9NVI1 1328 aa23■■□□□ 1.27
LIN54-204ENST00000505397 GGT6Q6P531 493 aa23■■□□□ 1.27
LIN54-204ENST00000505397 ZMYM4Q5VZL5 1548 aa22.97■■□□□ 1.27
LIN54-204ENST00000505397 KIF1BO60333 1816 aa22.95■■□□□ 1.27
LIN54-204ENST00000505397 KIF13AQ9H1H9 1805 aa22.95■■□□□ 1.26
LIN54-204ENST00000505397 RNF123Q5XPI4 1314 aa22.95■■□□□ 1.26
LIN54-204ENST00000505397 YEATS2Q9ULM3 1422 aa22.95■■□□□ 1.26
LIN54-204ENST00000505397 PNISRQ8TF01 805 aaKnown RBP22.95■■□□□ 1.26
LIN54-204ENST00000505397 MSH5O43196 834 aa22.94■■□□□ 1.26
LIN54-204ENST00000505397 LAMC1P11047 1609 aa22.93■■□□□ 1.26
LIN54-204ENST00000505397 WASHC2CQ9Y4E1 1318 aa22.93■■□□□ 1.26
LIN54-204ENST00000505397 ABCC3O15438 1527 aa22.93■■□□□ 1.26
LIN54-204ENST00000505397 KTN1Q86UP2 1357 aaKnown RBP22.93■■□□□ 1.26
LIN54-204ENST00000505397 NEURL4Q96JN8 1562 aa22.92■■□□□ 1.26
LIN54-204ENST00000505397 NUDCQ9Y266 331 aa22.92■■□□□ 1.26
LIN54-204ENST00000505397 POLR3GLQ9BT43 218 aa22.92■■□□□ 1.26
LIN54-204ENST00000505397 CAMSAP1Q5T5Y3 1602 aa22.91■■□□□ 1.26
LIN54-204ENST00000505397 ST20-MTHFSA0A0A6YYL1 179 aa22.91■■□□□ 1.26
Retrieved 100 of 20,778 RNA–protein pairs in 15.9 ms