RNA–Protein interactions for RNA: ENST00000505045.1

CDH9-203, Transcript of cadherin 9, humanhuman

TSL 1 (best)

Gene CDH9, Length 1,801 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CDH9-203ENST00000505045 RGS20O76081 388 aa8.58□□□□□ -1.04
CDH9-203ENST00000505045 NLRP6P59044 892 aa8.57□□□□□ -1.04
CDH9-203ENST00000505045 CYB5RLQ6IPT4 315 aa8.57□□□□□ -1.04
CDH9-203ENST00000505045 LSM11P83369 360 aaKnown RBP eCLIP8.57□□□□□ -1.04
CDH9-203ENST00000505045 NUP160Q12769 1436 aa8.56□□□□□ -1.04
CDH9-203ENST00000505045 MICALL2Q8IY33 904 aa8.56□□□□□ -1.04
CDH9-203ENST00000505045 SHROOM2Q13796 1616 aa8.56□□□□□ -1.04
CDH9-203ENST00000505045 FHAD1B1AJZ9 1412 aa8.55□□□□□ -1.04
CDH9-203ENST00000505045 HS6ST3Q8IZP7 471 aa8.55□□□□□ -1.04
CDH9-203ENST00000505045 RUSC2Q8N2Y8 1516 aa8.55□□□□□ -1.04
CDH9-203ENST00000505045 G3V3G9 751 aa8.52□□□□□ -1.04
CDH9-203ENST00000505045 TMEM92Q6UXU6 159 aa8.52□□□□□ -1.04
CDH9-203ENST00000505045 CUL7Q14999 1698 aa8.5□□□□□ -1.05
CDH9-203ENST00000505045 Q6ZNB5 142 aa8.49□□□□□ -1.05
CDH9-203ENST00000505045 ZSWIM6Q9HCJ5 1215 aa8.48□□□□□ -1.05
CDH9-203ENST00000505045 KIF27Q86VH2 1401 aa8.48□□□□□ -1.05
CDH9-203ENST00000505045 CHGAP10645 457 aaKnown RBP8.47□□□□□ -1.05
CDH9-203ENST00000505045 IGF1RP08069 1367 aa8.47□□□□□ -1.05
CDH9-203ENST00000505045 PPP1R37O75864 691 aa8.45□□□□□ -1.06
CDH9-203ENST00000505045 NKX1-1Q15270 411 aaPredicted RBP8.45□□□□□ -1.06
CDH9-203ENST00000505045 PRG4Q92954 1404 aaPredicted RBP8.45□□□□□ -1.06
CDH9-203ENST00000505045 GPR153Q6NV75 609 aa8.44□□□□□ -1.06
CDH9-203ENST00000505045 KIF3CO14782 793 aa8.43□□□□□ -1.06
CDH9-203ENST00000505045 ADCY10Q96PN6 1610 aa8.42□□□□□ -1.06
CDH9-203ENST00000505045 KIF13AQ9H1H9 1805 aa8.42□□□□□ -1.06
CDH9-203ENST00000505045 KIAA0586Q9BVV6 1533 aa8.42□□□□□ -1.06
CDH9-203ENST00000505045 JPH4Q96JJ6 628 aa8.4□□□□□ -1.06
CDH9-203ENST00000505045 CARMIL1Q5VZK9 1371 aa8.4□□□□□ -1.06
CDH9-203ENST00000505045 IQGAP2Q13576 1575 aa8.4□□□□□ -1.06
CDH9-203ENST00000505045 CTTNBP2Q8WZ74 1663 aa8.37□□□□□ -1.07
CDH9-203ENST00000505045 C2orf72A6NCS6 295 aa8.36□□□□□ -1.07
CDH9-203ENST00000505045 DISP1Q96F81 1524 aa8.36□□□□□ -1.07
CDH9-203ENST00000505045 RAPGEF2Q9Y4G8 1499 aa8.36□□□□□ -1.07
CDH9-203ENST00000505045 ZNF316A6NFI3 1004 aaPredicted RBP8.36□□□□□ -1.07
CDH9-203ENST00000505045 DIP2BQ9P265 1576 aa8.35□□□□□ -1.07
CDH9-203ENST00000505045 KIAA0556O60303 1618 aa8.34□□□□□ -1.07
CDH9-203ENST00000505045 GTPBP6O43824 516 aaPredicted RBP8.34□□□□□ -1.07
CDH9-203ENST00000505045 PBX2P40425 430 aa8.34□□□□□ -1.07
CDH9-203ENST00000505045 AMER1Q5JTC6 1135 aaPredicted RBP8.34□□□□□ -1.07
CDH9-203ENST00000505045 MAPKBP1O60336 1514 aa8.34□□□□□ -1.07
CDH9-203ENST00000505045 IFFO2Q5TF58 517 aa8.33□□□□□ -1.08
CDH9-203ENST00000505045 UGGT2Q9NYU1 1516 aa8.33□□□□□ -1.08
CDH9-203ENST00000505045 A0A0G2JS52 829 aa8.33□□□□□ -1.08
CDH9-203ENST00000505045 PRXQ9BXM0 1461 aa8.32□□□□□ -1.08
CDH9-203ENST00000505045 RTN4Q9NQC3 1192 aaKnown RBP8.32□□□□□ -1.08
CDH9-203ENST00000505045 RYDENQ9NUL5 291 aaKnown RBP8.32□□□□□ -1.08
CDH9-203ENST00000505045 ARSIQ5FYB1 569 aa8.31□□□□□ -1.08
CDH9-203ENST00000505045 ABCC10Q5T3U5 1492 aa8.3□□□□□ -1.08
CDH9-203ENST00000505045 TTBK1Q5TCY1 1321 aaPredicted RBP8.3□□□□□ -1.08
CDH9-203ENST00000505045 ABCC2Q92887 1545 aa8.3□□□□□ -1.08
CDH9-203ENST00000505045 POTEEQ6S8J3 1075 aa8.3□□□□□ -1.08
CDH9-203ENST00000505045 TSPOAP1O95153 1857 aa8.3□□□□□ -1.08
CDH9-203ENST00000505045 PTPRGP23470 1445 aa8.29□□□□□ -1.08
CDH9-203ENST00000505045 TMC2Q8TDI7 906 aa8.29□□□□□ -1.08
CDH9-203ENST00000505045 AXIN2Q9Y2T1 843 aa8.29□□□□□ -1.08
CDH9-203ENST00000505045 TNIKQ9UKE5 1360 aa8.29□□□□□ -1.08
CDH9-203ENST00000505045 CARMIL2Q6F5E8 1435 aa8.29□□□□□ -1.08
CDH9-203ENST00000505045 SLC34A2O95436 690 aa8.29□□□□□ -1.08
CDH9-203ENST00000505045 ZCCHC11Q5TAX3 1644 aaKnown RBP8.28□□□□□ -1.08
CDH9-203ENST00000505045 ADGRD1Q6QNK2 874 aa8.28□□□□□ -1.08
CDH9-203ENST00000505045 GPHNQ9NQX3 736 aaPredicted RBP8.28□□□□□ -1.08
CDH9-203ENST00000505045 PPRC1Q5VV67 1664 aaKnown RBP8.27□□□□□ -1.08
CDH9-203ENST00000505045 LCE2BO14633 110 aa8.26□□□□□ -1.09
CDH9-203ENST00000505045 FOXK1P85037 733 aa8.26□□□□□ -1.09
CDH9-203ENST00000505045 UHRF1BP1LA0JNW5 1464 aa8.26□□□□□ -1.09
CDH9-203ENST00000505045 PLB1Q6P1J6 1458 aa8.26□□□□□ -1.09
CDH9-203ENST00000505045 KCTD12Q96CX2 325 aaKnown RBP8.26□□□□□ -1.09
CDH9-203ENST00000505045 CRISPLD2Q9H0B8 497 aa8.26□□□□□ -1.09
CDH9-203ENST00000505045 UACAQ9BZF9 1416 aa8.26□□□□□ -1.09
CDH9-203ENST00000505045 KDM5BQ9UGL1 1544 aa8.25□□□□□ -1.09
CDH9-203ENST00000505045 ASXL2Q76L83 1435 aa8.24□□□□□ -1.09
CDH9-203ENST00000505045 FAM69CQ0P6D2 419 aa8.24□□□□□ -1.09
CDH9-203ENST00000505045 KHSRPQ92945 711 aaKnown RBP eCLIP8.24□□□□□ -1.09
CDH9-203ENST00000505045 ABCA8O94911 1581 aa8.24□□□□□ -1.09
CDH9-203ENST00000505045 SAMD9Q5K651 1589 aa8.24□□□□□ -1.09
CDH9-203ENST00000505045 LOC100996750A0A140TA64 210 aa8.23□□□□□ -1.09
CDH9-203ENST00000505045 DSG2Q14126 1118 aa8.23□□□□□ -1.09
CDH9-203ENST00000505045 KRTAP4-6Q9BYQ5 205 aa8.23□□□□□ -1.09
CDH9-203ENST00000505045 TRAF7Q6Q0C0 670 aa8.22□□□□□ -1.09
CDH9-203ENST00000505045 PLPP6Q8IY26 295 aa8.22□□□□□ -1.09
CDH9-203ENST00000505045 BBXQ8WY36 941 aaPredicted RBP8.22□□□□□ -1.09
CDH9-203ENST00000505045 PCDHGA4Q9Y5G9 962 aa8.22□□□□□ -1.09
CDH9-203ENST00000505045 KDM6BO15054 1643 aa8.22□□□□□ -1.09
CDH9-203ENST00000505045 MAP3K4Q9Y6R4 1608 aa8.22□□□□□ -1.09
CDH9-203ENST00000505045 NCKAP5LQ9HCH0 1330 aa8.22□□□□□ -1.09
CDH9-203ENST00000505045 GLI2P10070 1586 aa8.22□□□□□ -1.09
CDH9-203ENST00000505045 GOLGA3Q08378 1498 aa8.21□□□□□ -1.09
CDH9-203ENST00000505045 KIF21BO75037 1637 aa8.21□□□□□ -1.09
CDH9-203ENST00000505045 KDM4FA0A1W2PPD8 638 aa8.21□□□□□ -1.1
CDH9-203ENST00000505045 PTCD2Q8WV60 388 aaKnown RBP8.21□□□□□ -1.1
CDH9-203ENST00000505045 EPRSP07814 1512 aaKnown RBP8.21□□□□□ -1.1
CDH9-203ENST00000505045 EEA1Q15075 1411 aa8.19□□□□□ -1.1
CDH9-203ENST00000505045 FAM9AQ8IZU1 332 aaPredicted RBP8.19□□□□□ -1.1
CDH9-203ENST00000505045 WDR7Q9Y4E6 1490 aa8.19□□□□□ -1.1
CDH9-203ENST00000505045 NUDT7P0C024 238 aa8.17□□□□□ -1.1
CDH9-203ENST00000505045 PDE4AP27815 886 aa8.17□□□□□ -1.1
CDH9-203ENST00000505045 CADPS2Q86UW7 1296 aa8.17□□□□□ -1.1
CDH9-203ENST00000505045 RAPGEF6Q8TEU7 1601 aa8.17□□□□□ -1.1
CDH9-203ENST00000505045 HRO43593 1189 aa8.17□□□□□ -1.1
CDH9-203ENST00000505045 MFSD10Q14728 455 aa8.17□□□□□ -1.1
Retrieved 100 of 20,778 RNA–protein pairs in 78.9 ms