RNA–Protein interactions for RNA: ENST00000505010.5

TPM3-218, Transcript of tropomyosin 3, humanhuman

TSL 2

Gene TPM3, Length 540 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TPM3-218ENST00000505010 CAMSAP1Q5T5Y3 1602 aa13.97□□□□□ -0.17
TPM3-218ENST00000505010 AGLP35573 1532 aa13.96□□□□□ -0.17
TPM3-218ENST00000505010 MBD5Q9P267 1494 aa13.96□□□□□ -0.17
TPM3-218ENST00000505010 PKD2Q13563 968 aa13.95□□□□□ -0.18
TPM3-218ENST00000505010 CHIC2Q9UKJ5 165 aa13.95□□□□□ -0.18
TPM3-218ENST00000505010 HFM1A2PYH4 1435 aa13.95□□□□□ -0.18
TPM3-218ENST00000505010 KIAA1107Q9UPP5 1409 aa13.95□□□□□ -0.18
TPM3-218ENST00000505010 MAST1Q9Y2H9 1570 aa13.95□□□□□ -0.18
TPM3-218ENST00000505010 NPATQ14207 1427 aa13.94□□□□□ -0.18
TPM3-218ENST00000505010 ZMYM3Q14202 1370 aa13.94□□□□□ -0.18
TPM3-218ENST00000505010 RAB3GAP2Q9H2M9 1393 aa13.94□□□□□ -0.18
TPM3-218ENST00000505010 ADGRL2O95490 1459 aa13.93□□□□□ -0.18
TPM3-218ENST00000505010 SCAF1Q9H7N4 1312 aaKnown RBP13.93□□□□□ -0.18
TPM3-218ENST00000505010 HNRNPMP52272 730 aaKnown RBP eCLIP13.93□□□□□ -0.18
TPM3-218ENST00000505010 ROCK1Q13464 1354 aa13.93□□□□□ -0.18
TPM3-218ENST00000505010 ABCA6Q8N139 1617 aa13.93□□□□□ -0.18
TPM3-218ENST00000505010 NAIPQ13075 1403 aa13.92□□□□□ -0.18
TPM3-218ENST00000505010 HSPA1LP34931 641 aa13.92□□□□□ -0.18
TPM3-218ENST00000505010 PIP4K2BP78356 416 aa13.91□□□□□ -0.18
TPM3-218ENST00000505010 RRP7BPQ9NSQ0 103 aa13.91□□□□□ -0.18
TPM3-218ENST00000505010 PLXNC1O60486 1568 aa13.91□□□□□ -0.18
TPM3-218ENST00000505010 TOM1O60784 492 aa13.9□□□□□ -0.18
TPM3-218ENST00000505010 PPP6R1Q9UPN7 881 aa13.9□□□□□ -0.18
TPM3-218ENST00000505010 ANKRD30AQ9BXX3 1397 aa13.89□□□□□ -0.19
TPM3-218ENST00000505010 PHF23Q9BUL5 403 aaPredicted RBP13.89□□□□□ -0.19
TPM3-218ENST00000505010 INO80Q9ULG1 1556 aaPredicted RBP13.88□□□□□ -0.19
TPM3-218ENST00000505010 TSPY4P0CV99 314 aa13.88□□□□□ -0.19
TPM3-218ENST00000505010 TSPY10P0CW01 314 aa13.88□□□□□ -0.19
TPM3-218ENST00000505010 RSPH4AQ5TD94 716 aa13.88□□□□□ -0.19
TPM3-218ENST00000505010 CCER1Q8TC90 406 aaPredicted RBP13.88□□□□□ -0.19
TPM3-218ENST00000505010 PLA2R1Q13018 1463 aa13.87□□□□□ -0.19
TPM3-218ENST00000505010 MED1Q15648 1581 aaPredicted RBP13.87□□□□□ -0.19
TPM3-218ENST00000505010 MROH2AA6NES4 1674 aa13.85□□□□□ -0.19
TPM3-218ENST00000505010 ATP7AQ04656 1500 aa13.85□□□□□ -0.19
TPM3-218ENST00000505010 KIF15Q9NS87 1388 aa13.84□□□□□ -0.19
TPM3-218ENST00000505010 KIDINS220Q9ULH0 1771 aa13.84□□□□□ -0.19
TPM3-218ENST00000505010 DHX57Q6P158 1386 aaKnown RBP13.83□□□□□ -0.19
TPM3-218ENST00000505010 GGT6Q6P531 493 aa13.83□□□□□ -0.2
TPM3-218ENST00000505010 SPAG9O60271 1321 aaKnown RBP13.83□□□□□ -0.2
TPM3-218ENST00000505010 CEP170BQ9Y4F5 1589 aaPredicted RBP13.82□□□□□ -0.2
TPM3-218ENST00000505010 DUOX2Q9NRD8 1548 aa13.81□□□□□ -0.2
TPM3-218ENST00000505010 HRCP23327 699 aa13.81□□□□□ -0.2
TPM3-218ENST00000505010 ANKRD50Q9ULJ7 1429 aa13.81□□□□□ -0.2
TPM3-218ENST00000505010 MYO3AQ8NEV4 1616 aa13.8□□□□□ -0.2
TPM3-218ENST00000505010 RTEL1-TNFRSF6BF6WH68 1400 aa13.8□□□□□ -0.2
TPM3-218ENST00000505010 ZNF142P52746 1687 aaPredicted RBP13.79□□□□□ -0.2
TPM3-218ENST00000505010 CPS1P31327 1500 aa13.79□□□□□ -0.2
TPM3-218ENST00000505010 CLTCQ00610 1675 aaKnown RBP13.79□□□□□ -0.2
TPM3-218ENST00000505010 UNC13BO14795 1591 aa13.78□□□□□ -0.2
TPM3-218ENST00000505010 EIF2AK4Q9P2K8 1649 aaKnown RBP13.76□□□□□ -0.21
TPM3-218ENST00000505010 A2ML1A8K2U0 1454 aa13.76□□□□□ -0.21
TPM3-218ENST00000505010 ERBINQ96RT1 1412 aa13.76□□□□□ -0.21
TPM3-218ENST00000505010 TRIM52Q96A61 297 aa13.76□□□□□ -0.21
TPM3-218ENST00000505010 A2MP01023 1474 aa13.75□□□□□ -0.21
TPM3-218ENST00000505010 ANKLE2Q86XL3 938 aa13.75□□□□□ -0.21
TPM3-218ENST00000505010 SENP3Q9H4L4 574 aaPredicted RBP13.75□□□□□ -0.21
TPM3-218ENST00000505010 ACIN1Q9UKV3 1341 aaKnown RBP13.74□□□□□ -0.21
TPM3-218ENST00000505010 ZEB1P37275 1124 aaPredicted RBP13.74□□□□□ -0.21
TPM3-218ENST00000505010 KDM5DQ9BY66 1539 aa13.74□□□□□ -0.21
TPM3-218ENST00000505010 DEPDC5O75140 1603 aa13.72□□□□□ -0.21
TPM3-218ENST00000505010 THEMISQ8N1K5 641 aaPredicted RBP13.72□□□□□ -0.21
TPM3-218ENST00000505010 PZPP20742 1482 aa13.72□□□□□ -0.21
TPM3-218ENST00000505010 IQGAP3Q86VI3 1631 aa13.72□□□□□ -0.21
TPM3-218ENST00000505010 CLSPNQ9HAW4 1339 aa13.71□□□□□ -0.21
TPM3-218ENST00000505010 FBXO31Q5XUX0 539 aaPredicted RBP13.71□□□□□ -0.21
TPM3-218ENST00000505010 TNRQ92752 1358 aa13.7□□□□□ -0.22
TPM3-218ENST00000505010 FAM135AQ9P2D6 1515 aa13.69□□□□□ -0.22
TPM3-218ENST00000505010 RNF17Q9BXT8 1623 aaKnown RBP13.68□□□□□ -0.22
TPM3-218ENST00000505010 NEURL4Q96JN8 1562 aa13.68□□□□□ -0.22
TPM3-218ENST00000505010 RGS17Q9UGC6 210 aaPredicted RBP13.68□□□□□ -0.22
TPM3-218ENST00000505010 NUP155O75694 1391 aa13.68□□□□□ -0.22
TPM3-218ENST00000505010 POLR1AO95602 1720 aaPredicted RBP13.67□□□□□ -0.22
TPM3-218ENST00000505010 MPHOSPH9Q99550 1183 aa13.67□□□□□ -0.22
TPM3-218ENST00000505010 DHX29Q7Z478 1369 aaKnown RBP13.67□□□□□ -0.22
TPM3-218ENST00000505010 MROH1Q8NDA8 1641 aa13.67□□□□□ -0.22
TPM3-218ENST00000505010 NPHP4O75161 1426 aaPredicted RBP13.66□□□□□ -0.22
TPM3-218ENST00000505010 PRDM15P57071 1507 aaPredicted RBP13.66□□□□□ -0.22
TPM3-218ENST00000505010 CEP152O94986 1710 aa13.66□□□□□ -0.22
TPM3-218ENST00000505010 VWDEQ8N2E2 1590 aa13.66□□□□□ -0.22
TPM3-218ENST00000505010 ALKQ9UM73 1620 aa13.65□□□□□ -0.22
TPM3-218ENST00000505010 KIF3BO15066 747 aa13.65□□□□□ -0.22
TPM3-218ENST00000505010 SLC4A1APQ9BWU0 796 aaKnown RBP13.65□□□□□ -0.22
TPM3-218ENST00000505010 WASHC2CQ9Y4E1 1318 aa13.64□□□□□ -0.23
TPM3-218ENST00000505010 TET3O43151 1660 aa13.64□□□□□ -0.23
TPM3-218ENST00000505010 GRWD1Q9BQ67 446 aaKnown RBP eCLIP13.64□□□□□ -0.237e-21■■■■■ 27.3
TPM3-218ENST00000505010 MED14O60244 1454 aa13.63□□□□□ -0.23
TPM3-218ENST00000505010 NLRP1Q9C000 1473 aa13.61□□□□□ -0.23
TPM3-218ENST00000505010 KANK1Q14678 1352 aa13.61□□□□□ -0.23
TPM3-218ENST00000505010 LRRC7Q96NW7 1537 aa13.61□□□□□ -0.23
TPM3-218ENST00000505010 E9PCH4 1651 aa13.61□□□□□ -0.23
TPM3-218ENST00000505010 UGGT1Q9NYU2 1555 aa13.61□□□□□ -0.23
TPM3-218ENST00000505010 FOXD1Q16676 465 aa13.6□□□□□ -0.23
TPM3-218ENST00000505010 ZC3H13Q5T200 1668 aaKnown RBP13.59□□□□□ -0.23
TPM3-218ENST00000505010 POTEAQ6S8J7 498 aa13.59□□□□□ -0.23
TPM3-218ENST00000505010 SIN3AQ96ST3 1273 aa13.59□□□□□ -0.23
TPM3-218ENST00000505010 SPHKAPQ2M3C7 1700 aa13.59□□□□□ -0.23
TPM3-218ENST00000505010 NEUROD1Q13562 356 aa13.58□□□□□ -0.24
TPM3-218ENST00000505010 EFCAB6Q5THR3 1501 aa13.57□□□□□ -0.24
TPM3-218ENST00000505010 ANKRD30BQ9BXX2 1392 aa13.57□□□□□ -0.24
TPM3-218ENST00000505010 IQGAP1P46940 1657 aa13.56□□□□□ -0.24
Retrieved 100 of 20,778 RNA–protein pairs in 82.6 ms