RNA–Protein interactions for RNA: ENST00000504807.5

DDX41-204, Transcript of DEAD-box helicase 41, humanhuman

TSL 2

Gene DDX41, Length 794 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
DDX41-204ENST00000504807 PTPRKQ15262 1439 aa21.04■□□□□ 0.96
DDX41-204ENST00000504807 PLEKHH2Q8IVE3 1493 aa21.04■□□□□ 0.96
DDX41-204ENST00000504807 SHANK2Q9UPX8 1470 aa21.04■□□□□ 0.96
DDX41-204ENST00000504807 SUPT6HQ7KZ85 1726 aaKnown RBP21.04■□□□□ 0.96
DDX41-204ENST00000504807 LRRC9Q6ZRR7 1453 aa21.01■□□□□ 0.95
DDX41-204ENST00000504807 KANK4Q5T7N3 995 aaPredicted RBP21■□□□□ 0.95
DDX41-204ENST00000504807 ALKQ9UM73 1620 aa21■□□□□ 0.95
DDX41-204ENST00000504807 CLTCQ00610 1675 aaKnown RBP20.99■□□□□ 0.95
DDX41-204ENST00000504807 A2MP01023 1474 aa20.99■□□□□ 0.95
DDX41-204ENST00000504807 CAMSAP2Q08AD1 1489 aa20.99■□□□□ 0.95
DDX41-204ENST00000504807 GGT6Q6P531 493 aa20.98■□□□□ 0.95
DDX41-204ENST00000504807 A2ML1A8K2U0 1454 aa20.96■□□□□ 0.95
DDX41-204ENST00000504807 ADGBQ8N7X0 1667 aa20.95■□□□□ 0.94
DDX41-204ENST00000504807 NEURL4Q96JN8 1562 aa20.93■□□□□ 0.94
DDX41-204ENST00000504807 DNMT1P26358 1616 aaKnown RBP20.93■□□□□ 0.94
DDX41-204ENST00000504807 CCDC141Q6ZP82 1450 aa20.92■□□□□ 0.94
DDX41-204ENST00000504807 MAP3K1Q13233 1512 aa20.91■□□□□ 0.94
DDX41-204ENST00000504807 POTEAQ6S8J7 498 aa20.91■□□□□ 0.94
DDX41-204ENST00000504807 VWDEQ8N2E2 1590 aa20.9■□□□□ 0.94
DDX41-204ENST00000504807 RTEL1-TNFRSF6BF6WH68 1400 aa20.9■□□□□ 0.94
DDX41-204ENST00000504807 ANKLE2Q86XL3 938 aa20.89■□□□□ 0.93
DDX41-204ENST00000504807 ARHGEF5Q12774 1597 aa20.88■□□□□ 0.93
DDX41-204ENST00000504807 POLR1AO95602 1720 aaPredicted RBP20.87■□□□□ 0.93
DDX41-204ENST00000504807 DROSHAQ9NRR4 1374 aaKnown RBP eCLIP20.86■□□□□ 0.93
DDX41-204ENST00000504807 DHX29Q7Z478 1369 aaKnown RBP20.85■□□□□ 0.93
DDX41-204ENST00000504807 FBXO31Q5XUX0 539 aaPredicted RBP20.85■□□□□ 0.93
DDX41-204ENST00000504807 TNRQ92752 1358 aa20.84■□□□□ 0.93
DDX41-204ENST00000504807 NPHP4O75161 1426 aaPredicted RBP20.83■□□□□ 0.93
DDX41-204ENST00000504807 MYOM3Q5VTT5 1437 aa20.82■□□□□ 0.92
DDX41-204ENST00000504807 LRRC7Q96NW7 1537 aa20.82■□□□□ 0.92
DDX41-204ENST00000504807 THEMISQ8N1K5 641 aaPredicted RBP20.79■□□□□ 0.92
DDX41-204ENST00000504807 MAST1Q9Y2H9 1570 aa20.79■□□□□ 0.92
DDX41-204ENST00000504807 RNF17Q9BXT8 1623 aaKnown RBP20.78■□□□□ 0.92
DDX41-204ENST00000504807 MIA2Q96PC5 1412 aa20.77■□□□□ 0.91
DDX41-204ENST00000504807 KIF3BO15066 747 aa20.76■□□□□ 0.91
DDX41-204ENST00000504807 MED14O60244 1454 aa20.75■□□□□ 0.91
DDX41-204ENST00000504807 RSPH4AQ5TD94 716 aa20.74■□□□□ 0.91
DDX41-204ENST00000504807 SETD1AO15047 1707 aaKnown RBP20.73■□□□□ 0.91
DDX41-204ENST00000504807 MROH1Q8NDA8 1641 aa20.73■□□□□ 0.91
DDX41-204ENST00000504807 KDM5DQ9BY66 1539 aa20.73■□□□□ 0.91
DDX41-204ENST00000504807 STRCP1A6NGW2 1772 aa20.72■□□□□ 0.91
DDX41-204ENST00000504807 FAM135AQ9P2D6 1515 aa20.72■□□□□ 0.91
DDX41-204ENST00000504807 PTPN23Q9H3S7 1636 aa20.71■□□□□ 0.91
DDX41-204ENST00000504807 UGGT1Q9NYU2 1555 aa20.71■□□□□ 0.91
DDX41-204ENST00000504807 ABCC5O15440 1437 aa20.7■□□□□ 0.9
DDX41-204ENST00000504807 TSPY4P0CV99 314 aa20.7■□□□□ 0.9
DDX41-204ENST00000504807 TSPY10P0CW01 314 aa20.7■□□□□ 0.9
DDX41-204ENST00000504807 DEPDC5O75140 1603 aa20.7■□□□□ 0.9
DDX41-204ENST00000504807 CROCC2H7BZ55 1655 aa20.7■□□□□ 0.9
DDX41-204ENST00000504807 IQGAP1P46940 1657 aa20.7■□□□□ 0.9
DDX41-204ENST00000504807 PZPP20742 1482 aa20.69■□□□□ 0.9
DDX41-204ENST00000504807 SYNMO15061 1565 aa20.69■□□□□ 0.9
DDX41-204ENST00000504807 FGD6Q6ZV73 1430 aa20.67■□□□□ 0.9
DDX41-204ENST00000504807 NLRP1Q9C000 1473 aa20.67■□□□□ 0.9
DDX41-204ENST00000504807 ABCC3O15438 1527 aa20.66■□□□□ 0.9
DDX41-204ENST00000504807 EIF2AK4Q9P2K8 1649 aaKnown RBP20.65■□□□□ 0.9
DDX41-204ENST00000504807 WASHC2CQ9Y4E1 1318 aa20.65■□□□□ 0.9
DDX41-204ENST00000504807 UPF1Q92900 1129 aaKnown RBP eCLIP20.65■□□□□ 0.9
DDX41-204ENST00000504807 DAPK1P53355 1430 aa20.64■□□□□ 0.89
DDX41-204ENST00000504807 SRCAPQ6ZRS2 3230 aa20.64■□□□□ 0.89
DDX41-204ENST00000504807 FAM135BQ49AJ0 1406 aa20.62■□□□□ 0.89
DDX41-204ENST00000504807 DUOX2Q9NRD8 1548 aa20.62■□□□□ 0.89
DDX41-204ENST00000504807 CEP152O94986 1710 aa20.61■□□□□ 0.89
DDX41-204ENST00000504807 KIF15Q9NS87 1388 aa20.6■□□□□ 0.89
DDX41-204ENST00000504807 APLP2Q06481 763 aa20.6■□□□□ 0.89
DDX41-204ENST00000504807 RRP7BPQ9NSQ0 103 aa20.59■□□□□ 0.89
DDX41-204ENST00000504807 ZC3H13Q5T200 1668 aaKnown RBP20.58■□□□□ 0.88
DDX41-204ENST00000504807 TRIM52Q96A61 297 aa20.57■□□□□ 0.88
DDX41-204ENST00000504807 PRDM15P57071 1507 aaPredicted RBP20.57■□□□□ 0.88
DDX41-204ENST00000504807 ERVK-7P63135 1459 aa20.55■□□□□ 0.88
DDX41-204ENST00000504807 CHIC2Q9UKJ5 165 aa20.54■□□□□ 0.88
DDX41-204ENST00000504807 ERBINQ96RT1 1412 aa20.53■□□□□ 0.88
DDX41-204ENST00000504807 SCAF11Q99590 1463 aaKnown RBP20.51■□□□□ 0.87
DDX41-204ENST00000504807 LTKP29376 864 aa20.51■□□□□ 0.87
DDX41-204ENST00000504807 TMEM94Q12767 1356 aa20.5■□□□□ 0.87
DDX41-204ENST00000504807 TXNDC2Q86VQ3 553 aa20.5■□□□□ 0.87
DDX41-204ENST00000504807 RBM33Q96EV2 1170 aaKnown RBP20.5■□□□□ 0.87
DDX41-204ENST00000504807 ROBO1Q9Y6N7 1651 aa20.5■□□□□ 0.87
DDX41-204ENST00000504807 XIRP1Q702N8 1843 aaKnown RBP20.5■□□□□ 0.87
DDX41-204ENST00000504807 ADGRL2O95490 1459 aa20.49■□□□□ 0.87
DDX41-204ENST00000504807 JCADQ9P266 1359 aa20.46■□□□□ 0.87
DDX41-204ENST00000504807 ANKRD30AQ9BXX3 1397 aa20.46■□□□□ 0.87
DDX41-204ENST00000504807 FAM50AQ14320 339 aaKnown RBP20.45■□□□□ 0.86
DDX41-204ENST00000504807 MEX3CQ5U5Q3 659 aaKnown RBP20.45■□□□□ 0.86
DDX41-204ENST00000504807 PPARGC1BQ86YN6 1023 aaKnown RBP20.45■□□□□ 0.86
DDX41-204ENST00000504807 GRWD1Q9BQ67 446 aaKnown RBP eCLIP20.45■□□□□ 0.861e-6■■■■□ 26.5
DDX41-204ENST00000504807 ARHGAP31Q2M1Z3 1444 aa20.44■□□□□ 0.86
DDX41-204ENST00000504807 ZNF772Q68DY9 489 aaPredicted RBP20.44■□□□□ 0.86
DDX41-204ENST00000504807 CFAP65Q6ZU64 1925 aaKnown RBP20.44■□□□□ 0.86
DDX41-204ENST00000504807 UBR1Q8IWV7 1749 aa20.44■□□□□ 0.86
DDX41-204ENST00000504807 LMTK2Q8IWU2 1503 aa20.43■□□□□ 0.86
DDX41-204ENST00000504807 PROSER2Q86WR7 435 aaPredicted RBP20.42■□□□□ 0.86
DDX41-204ENST00000504807 EID1Q9Y6B2 187 aa20.41■□□□□ 0.86
DDX41-204ENST00000504807 LRP6O75581 1613 aa20.4■□□□□ 0.86
DDX41-204ENST00000504807 RXRBP28702 533 aa20.39■□□□□ 0.85
DDX41-204ENST00000504807 PIK3C2BO00750 1634 aa20.38■□□□□ 0.85
DDX41-204ENST00000504807 ARHGAP23Q9P227 1491 aa20.38■□□□□ 0.85
DDX41-204ENST00000504807 SLAIN2Q9P270 581 aa20.38■□□□□ 0.85
DDX41-204ENST00000504807 EFCAB6Q5THR3 1501 aa20.37■□□□□ 0.85
DDX41-204ENST00000504807 PHLPP1O60346 1717 aa20.37■□□□□ 0.85
Retrieved 100 of 20,778 RNA–protein pairs in 34.8 ms