RNA–Protein interactions for RNA: ENST00000504722.5

CNGA1-204, Transcript of cyclic nucleotide gated channel alpha 1, humanhuman

TSL 4

Gene CNGA1, Length 543 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CNGA1-204ENST00000504722 ANKLE2Q86XL3 938 aa9.14□□□□□ -0.95
CNGA1-204ENST00000504722 SAMD9LQ8IVG5 1584 aa9.14□□□□□ -0.95
CNGA1-204ENST00000504722 VWDEQ8N2E2 1590 aa9.14□□□□□ -0.95
CNGA1-204ENST00000504722 A2MP01023 1474 aa9.12□□□□□ -0.95
CNGA1-204ENST00000504722 EEA1Q15075 1411 aa9.12□□□□□ -0.95
CNGA1-204ENST00000504722 PLXNC1O60486 1568 aa9.12□□□□□ -0.95
CNGA1-204ENST00000504722 HNRNPMP52272 730 aaKnown RBP eCLIP9.11□□□□□ -0.95
CNGA1-204ENST00000504722 POTEAQ6S8J7 498 aa9.11□□□□□ -0.95
CNGA1-204ENST00000504722 ZNF777Q9ULD5 760 aaPredicted RBP9.11□□□□□ -0.95
CNGA1-204ENST00000504722 CDC42BPAQ5VT25 1732 aa9.11□□□□□ -0.95
CNGA1-204ENST00000504722 LRRIQ1Q96JM4 1722 aa9.11□□□□□ -0.95
CNGA1-204ENST00000504722 THEMISQ8N1K5 641 aaPredicted RBP9.1□□□□□ -0.95
CNGA1-204ENST00000504722 TNRQ92752 1358 aa9.1□□□□□ -0.95
CNGA1-204ENST00000504722 DROSHAQ9NRR4 1374 aaKnown RBP eCLIP9.1□□□□□ -0.95
CNGA1-204ENST00000504722 ATP7AQ04656 1500 aa9.1□□□□□ -0.95
CNGA1-204ENST00000504722 RNF17Q9BXT8 1623 aaKnown RBP9.09□□□□□ -0.95
CNGA1-204ENST00000504722 MED14O60244 1454 aa9.09□□□□□ -0.95
CNGA1-204ENST00000504722 NPHP4O75161 1426 aaPredicted RBP9.09□□□□□ -0.95
CNGA1-204ENST00000504722 LRRC7Q96NW7 1537 aa9.09□□□□□ -0.95
CNGA1-204ENST00000504722 SYCP2Q9BX26 1530 aa9.09□□□□□ -0.95
CNGA1-204ENST00000504722 FBXO31Q5XUX0 539 aaPredicted RBP9.08□□□□□ -0.96
CNGA1-204ENST00000504722 DEPDC5O75140 1603 aa9.08□□□□□ -0.96
CNGA1-204ENST00000504722 ARHGAP35Q9NRY4 1499 aa9.08□□□□□ -0.96
CNGA1-204ENST00000504722 INO80Q9ULG1 1556 aaPredicted RBP9.07□□□□□ -0.96
CNGA1-204ENST00000504722 STRCP1A6NGW2 1772 aa9.07□□□□□ -0.96
CNGA1-204ENST00000504722 SYNMO15061 1565 aa9.07□□□□□ -0.96
CNGA1-204ENST00000504722 IQGAP1P46940 1657 aa9.07□□□□□ -0.96
CNGA1-204ENST00000504722 FAM135AQ9P2D6 1515 aa9.06□□□□□ -0.96
CNGA1-204ENST00000504722 UBTFP17480 764 aaKnown RBP9.06□□□□□ -0.96
CNGA1-204ENST00000504722 ADGBQ8N7X0 1667 aa9.06□□□□□ -0.96
CNGA1-204ENST00000504722 KIAA1107Q9UPP5 1409 aa9.05□□□□□ -0.96
CNGA1-204ENST00000504722 SETD1AO15047 1707 aaKnown RBP9.05□□□□□ -0.96
CNGA1-204ENST00000504722 UGGT1Q9NYU2 1555 aa9.05□□□□□ -0.96
CNGA1-204ENST00000504722 CCDC18Q5T9S5 1454 aa9.05□□□□□ -0.96
CNGA1-204ENST00000504722 PZPP20742 1482 aa9.04□□□□□ -0.96
CNGA1-204ENST00000504722 PLEKHH2Q8IVE3 1493 aa9.04□□□□□ -0.96
CNGA1-204ENST00000504722 NLRP1Q9C000 1473 aa9.04□□□□□ -0.96
CNGA1-204ENST00000504722 GPATCH8Q9UKJ3 1502 aaKnown RBP9.04□□□□□ -0.96
CNGA1-204ENST00000504722 MIA2Q96PC5 1412 aa9.04□□□□□ -0.96
CNGA1-204ENST00000504722 EHMT2Q96KQ7 1210 aa9.03□□□□□ -0.96
CNGA1-204ENST00000504722 CFDP1Q9UEE9 299 aaPredicted RBP9.03□□□□□ -0.96
CNGA1-204ENST00000504722 FAM135BQ49AJ0 1406 aa9.03□□□□□ -0.96
CNGA1-204ENST00000504722 UPF1Q92900 1129 aaKnown RBP eCLIP9.02□□□□□ -0.97
CNGA1-204ENST00000504722 WASHC2CQ9Y4E1 1318 aa9.02□□□□□ -0.97
CNGA1-204ENST00000504722 DHX29Q7Z478 1369 aaKnown RBP9.01□□□□□ -0.97
CNGA1-204ENST00000504722 KDM5DQ9BY66 1539 aa9.01□□□□□ -0.97
CNGA1-204ENST00000504722 KIF3BO15066 747 aa9.01□□□□□ -0.97
CNGA1-204ENST00000504722 CASKIN1Q8WXD9 1431 aa9.01□□□□□ -0.97
CNGA1-204ENST00000504722 XIRP1Q702N8 1843 aaKnown RBP9.01□□□□□ -0.97
CNGA1-204ENST00000504722 RTEL1-TNFRSF6BF6WH68 1400 aa8.99□□□□□ -0.97
CNGA1-204ENST00000504722 ZC3H13Q5T200 1668 aaKnown RBP8.99□□□□□ -0.97
CNGA1-204ENST00000504722 CCNB3Q8WWL7 1395 aa8.99□□□□□ -0.97
CNGA1-204ENST00000504722 ROBO1Q9Y6N7 1651 aa8.97□□□□□ -0.97
CNGA1-204ENST00000504722 TRIM52Q96A61 297 aa8.96□□□□□ -0.98
CNGA1-204ENST00000504722 ZNF644Q9H582 1327 aaPredicted RBP8.96□□□□□ -0.98
CNGA1-204ENST00000504722 SCAF11Q99590 1463 aaKnown RBP8.96□□□□□ -0.98
CNGA1-204ENST00000504722 MBD5Q9P267 1494 aa8.96□□□□□ -0.98
CNGA1-204ENST00000504722 LTKP29376 864 aa8.95□□□□□ -0.98
CNGA1-204ENST00000504722 ZNF772Q68DY9 489 aaPredicted RBP8.95□□□□□ -0.98
CNGA1-204ENST00000504722 TXNDC2Q86VQ3 553 aa8.95□□□□□ -0.98
CNGA1-204ENST00000504722 JCADQ9P266 1359 aa8.95□□□□□ -0.98
CNGA1-204ENST00000504722 FYCO1Q9BQS8 1478 aa8.95□□□□□ -0.98
CNGA1-204ENST00000504722 TMEM94Q12767 1356 aa8.94□□□□□ -0.98
CNGA1-204ENST00000504722 UBR1Q8IWV7 1749 aa8.94□□□□□ -0.98
CNGA1-204ENST00000504722 EID1Q9Y6B2 187 aa8.93□□□□□ -0.98
CNGA1-204ENST00000504722 LRRC9Q6ZRR7 1453 aa8.93□□□□□ -0.98
CNGA1-204ENST00000504722 PHLPP1O60346 1717 aa8.93□□□□□ -0.98
CNGA1-204ENST00000504722 CFAP65Q6ZU64 1925 aaKnown RBP8.92□□□□□ -0.98
CNGA1-204ENST00000504722 ERVK-7P63135 1459 aa8.92□□□□□ -0.98
CNGA1-204ENST00000504722 RXRBP28702 533 aa8.92□□□□□ -0.98
CNGA1-204ENST00000504722 MEX3CQ5U5Q3 659 aaKnown RBP8.92□□□□□ -0.98
CNGA1-204ENST00000504722 PROSER2Q86WR7 435 aaPredicted RBP8.92□□□□□ -0.98
CNGA1-204ENST00000504722 GRWD1Q9BQ67 446 aaKnown RBP eCLIP8.92□□□□□ -0.98
CNGA1-204ENST00000504722 SLIT1O75093 1534 aa8.91□□□□□ -0.98
CNGA1-204ENST00000504722 NCOA2Q15596 1464 aa8.91□□□□□ -0.98
CNGA1-204ENST00000504722 ARHGAP23Q9P227 1491 aa8.91□□□□□ -0.98
CNGA1-204ENST00000504722 SLAIN2Q9P270 581 aa8.91□□□□□ -0.98
CNGA1-204ENST00000504722 CCDC141Q6ZP82 1450 aa8.9□□□□□ -0.98
CNGA1-204ENST00000504722 MTUS2Q5JR59 1369 aa8.9□□□□□ -0.98
CNGA1-204ENST00000504722 SPATA31A6Q5VVP1 1343 aa8.9□□□□□ -0.98
CNGA1-204ENST00000504722 KCNA6P17658 529 aa8.9□□□□□ -0.98
CNGA1-204ENST00000504722 RSPH4AQ5TD94 716 aa8.9□□□□□ -0.98
CNGA1-204ENST00000504722 RBM33Q96EV2 1170 aaKnown RBP8.9□□□□□ -0.98
CNGA1-204ENST00000504722 TIAM1Q13009 1591 aa8.9□□□□□ -0.99
CNGA1-204ENST00000504722 ABCC3O15438 1527 aa8.9□□□□□ -0.99
CNGA1-204ENST00000504722 MAP3K1Q13233 1512 aa8.9□□□□□ -0.99
CNGA1-204ENST00000504722 LRP6O75581 1613 aa8.89□□□□□ -0.99
CNGA1-204ENST00000504722 MSH6P52701 1360 aa8.88□□□□□ -0.99
CNGA1-204ENST00000504722 SLC4A1APQ9BWU0 796 aaKnown RBP8.88□□□□□ -0.99
CNGA1-204ENST00000504722 CDK12Q9NYV4 1490 aaPredicted RBP8.88□□□□□ -0.99
CNGA1-204ENST00000504722 COL16A1Q07092 1604 aaPredicted RBP8.87□□□□□ -0.99
CNGA1-204ENST00000504722 PRDM15P57071 1507 aaPredicted RBP8.87□□□□□ -0.99
CNGA1-204ENST00000504722 TSPY4P0CV99 314 aa8.87□□□□□ -0.99
CNGA1-204ENST00000504722 TSPY10P0CW01 314 aa8.87□□□□□ -0.99
CNGA1-204ENST00000504722 FGD6Q6ZV73 1430 aa8.87□□□□□ -0.99
CNGA1-204ENST00000504722 TMEM2Q9UHN6 1383 aa8.86□□□□□ -0.99
CNGA1-204ENST00000504722 NKTRP30414 1462 aaKnown RBP8.86□□□□□ -0.99
CNGA1-204ENST00000504722 SLC26A8Q96RN1 970 aa8.86□□□□□ -0.99
CNGA1-204ENST00000504722 STAG3Q9UJ98 1225 aa8.86□□□□□ -0.99
CNGA1-204ENST00000504722 EP400Q96L91 3159 aa8.86□□□□□ -0.99
Retrieved 100 of 20,778 RNA–protein pairs in 21 ms