RNA–Protein interactions for RNA: ENST00000504417.1

ITGA3-203, Transcript of integrin subunit alpha 3, humanhuman

TSL 3

Gene ITGA3, Length 227 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ITGA3-203ENST00000504417 ZC3H13Q5T200 1668 aaKnown RBP11.36□□□□□ -0.59
ITGA3-203ENST00000504417 SPAG9O60271 1321 aaKnown RBP11.36□□□□□ -0.59
ITGA3-203ENST00000504417 ARID4BQ4LE39 1312 aaPredicted RBP11.36□□□□□ -0.59
ITGA3-203ENST00000504417 DEPDC5O75140 1603 aa11.36□□□□□ -0.59
ITGA3-203ENST00000504417 MYO3AQ8NEV4 1616 aa11.36□□□□□ -0.59
ITGA3-203ENST00000504417 ZNF777Q9ULD5 760 aaPredicted RBP11.36□□□□□ -0.59
ITGA3-203ENST00000504417 CEP152O94986 1710 aa11.35□□□□□ -0.59
ITGA3-203ENST00000504417 CNTLNQ9NXG0 1405 aa11.35□□□□□ -0.59
ITGA3-203ENST00000504417 FGD6Q6ZV73 1430 aa11.34□□□□□ -0.59
ITGA3-203ENST00000504417 DHX29Q7Z478 1369 aaKnown RBP11.32□□□□□ -0.6
ITGA3-203ENST00000504417 KDM5DQ9BY66 1539 aa11.32□□□□□ -0.6
ITGA3-203ENST00000504417 PRDM15P57071 1507 aaPredicted RBP11.31□□□□□ -0.6
ITGA3-203ENST00000504417 MLECQ14165 292 aa11.31□□□□□ -0.6
ITGA3-203ENST00000504417 ABCC5O15440 1437 aa11.31□□□□□ -0.6
ITGA3-203ENST00000504417 NPATQ14207 1427 aa11.3□□□□□ -0.6
ITGA3-203ENST00000504417 FOXD4L1Q9NU39 408 aa11.3□□□□□ -0.6
ITGA3-203ENST00000504417 CFAP65Q6ZU64 1925 aaKnown RBP11.3□□□□□ -0.6
ITGA3-203ENST00000504417 CAMSAP1Q5T5Y3 1602 aa11.3□□□□□ -0.6
ITGA3-203ENST00000504417 DUOX2Q9NRD8 1548 aa11.3□□□□□ -0.6
ITGA3-203ENST00000504417 VWDEQ8N2E2 1590 aa11.29□□□□□ -0.6
ITGA3-203ENST00000504417 DAPK1P53355 1430 aa11.29□□□□□ -0.6
ITGA3-203ENST00000504417 PTPRKQ15262 1439 aa11.29□□□□□ -0.6
ITGA3-203ENST00000504417 ADGRL2O95490 1459 aa11.29□□□□□ -0.6
ITGA3-203ENST00000504417 ABCC3O15438 1527 aa11.29□□□□□ -0.6
ITGA3-203ENST00000504417 RSPH4AQ5TD94 716 aa11.28□□□□□ -0.6
ITGA3-203ENST00000504417 POLR1AO95602 1720 aaPredicted RBP11.28□□□□□ -0.6
ITGA3-203ENST00000504417 CEP170BQ9Y4F5 1589 aaPredicted RBP11.28□□□□□ -0.6
ITGA3-203ENST00000504417 PZPP20742 1482 aa11.26□□□□□ -0.61
ITGA3-203ENST00000504417 SPATA31D1Q6ZQQ2 1576 aa11.26□□□□□ -0.61
ITGA3-203ENST00000504417 CEBPAP49715 358 aaPredicted RBP11.26□□□□□ -0.61
ITGA3-203ENST00000504417 UHRF1BP1Q6BDS2 1440 aa11.26□□□□□ -0.61
ITGA3-203ENST00000504417 ZMYM3Q14202 1370 aa11.25□□□□□ -0.61
ITGA3-203ENST00000504417 ERBINQ96RT1 1412 aa11.25□□□□□ -0.61
ITGA3-203ENST00000504417 MYT1LQ9UL68 1186 aa11.24□□□□□ -0.61
ITGA3-203ENST00000504417 NCOA1Q15788 1441 aa11.23□□□□□ -0.61
ITGA3-203ENST00000504417 UNC13BO14795 1591 aa11.23□□□□□ -0.61
ITGA3-203ENST00000504417 SLC4A2P04920 1241 aa11.22□□□□□ -0.61
ITGA3-203ENST00000504417 LMTK2Q8IWU2 1503 aa11.22□□□□□ -0.61
ITGA3-203ENST00000504417 UBR1Q8IWV7 1749 aa11.22□□□□□ -0.61
ITGA3-203ENST00000504417 GCC2Q8IWJ2 1684 aa11.21□□□□□ -0.61
ITGA3-203ENST00000504417 NEURL4Q96JN8 1562 aa11.21□□□□□ -0.61
ITGA3-203ENST00000504417 PLA2R1Q13018 1463 aa11.21□□□□□ -0.61
ITGA3-203ENST00000504417 KIF15Q9NS87 1388 aa11.21□□□□□ -0.61
ITGA3-203ENST00000504417 HSPA2P54652 639 aa11.21□□□□□ -0.61
ITGA3-203ENST00000504417 A2ML1A8K2U0 1454 aa11.2□□□□□ -0.62
ITGA3-203ENST00000504417 MYO5BQ9ULV0 1848 aa11.2□□□□□ -0.62
ITGA3-203ENST00000504417 KDM5AP29375 1690 aaKnown RBP11.2□□□□□ -0.62
ITGA3-203ENST00000504417 ERVK-7P63135 1459 aa11.19□□□□□ -0.62
ITGA3-203ENST00000504417 EFCAB6Q5THR3 1501 aa11.19□□□□□ -0.62
ITGA3-203ENST00000504417 TET3O43151 1660 aa11.18□□□□□ -0.62
ITGA3-203ENST00000504417 TSPY4P0CV99 314 aa11.18□□□□□ -0.62
ITGA3-203ENST00000504417 TSPY10P0CW01 314 aa11.18□□□□□ -0.62
ITGA3-203ENST00000504417 PTPRTO14522 1441 aa11.18□□□□□ -0.62
ITGA3-203ENST00000504417 ARHGAP31Q2M1Z3 1444 aa11.18□□□□□ -0.62
ITGA3-203ENST00000504417 DROSHAQ9NRR4 1374 aaKnown RBP eCLIP11.17□□□□□ -0.62
ITGA3-203ENST00000504417 LTBP4Q8N2S1 1624 aa11.17□□□□□ -0.62
ITGA3-203ENST00000504417 SYNMO15061 1565 aa11.17□□□□□ -0.62
ITGA3-203ENST00000504417 KIF3BO15066 747 aa11.17□□□□□ -0.62
ITGA3-203ENST00000504417 GGT6Q6P531 493 aa11.17□□□□□ -0.62
ITGA3-203ENST00000504417 IQGAP3Q86VI3 1631 aa11.17□□□□□ -0.62
ITGA3-203ENST00000504417 APLP2Q06481 763 aa11.16□□□□□ -0.62
ITGA3-203ENST00000504417 RRBP1Q9P2E9 1410 aaKnown RBP11.16□□□□□ -0.62
ITGA3-203ENST00000504417 E9PCH4 1651 aa11.15□□□□□ -0.62
ITGA3-203ENST00000504417 NLRP1Q9C000 1473 aa11.15□□□□□ -0.62
ITGA3-203ENST00000504417 PIK3C2BO00750 1634 aa11.15□□□□□ -0.62
ITGA3-203ENST00000504417 ANKRD30AQ9BXX3 1397 aa11.15□□□□□ -0.63
ITGA3-203ENST00000504417 STRCP1A6NGW2 1772 aa11.14□□□□□ -0.63
ITGA3-203ENST00000504417 ROCK1Q13464 1354 aa11.14□□□□□ -0.63
ITGA3-203ENST00000504417 TNRQ92752 1358 aa11.14□□□□□ -0.63
ITGA3-203ENST00000504417 IQGAP1P46940 1657 aa11.13□□□□□ -0.63
ITGA3-203ENST00000504417 UGGT1Q9NYU2 1555 aa11.12□□□□□ -0.63
ITGA3-203ENST00000504417 ESF1Q9H501 851 aaKnown RBP11.12□□□□□ -0.63
ITGA3-203ENST00000504417 FBXO31Q5XUX0 539 aaPredicted RBP11.11□□□□□ -0.63
ITGA3-203ENST00000504417 ARHGAP23Q9P227 1491 aa11.11□□□□□ -0.63
ITGA3-203ENST00000504417 NOS1P29475 1434 aa11.1□□□□□ -0.63
ITGA3-203ENST00000504417 ANKRD50Q9ULJ7 1429 aa11.1□□□□□ -0.63
ITGA3-203ENST00000504417 SLIT1O75093 1534 aa11.1□□□□□ -0.63
ITGA3-203ENST00000504417 MED14O60244 1454 aa11.1□□□□□ -0.63
ITGA3-203ENST00000504417 WASHC2CQ9Y4E1 1318 aa11.09□□□□□ -0.63
ITGA3-203ENST00000504417 SPHKAPQ2M3C7 1700 aa11.09□□□□□ -0.63
ITGA3-203ENST00000504417 XIRP1Q702N8 1843 aaKnown RBP11.09□□□□□ -0.63
ITGA3-203ENST00000504417 RRP7BPQ9NSQ0 103 aa11.09□□□□□ -0.63
ITGA3-203ENST00000504417 RPRD2Q5VT52 1461 aaKnown RBP11.08□□□□□ -0.64
ITGA3-203ENST00000504417 ADGRB3O60242 1522 aa11.08□□□□□ -0.64
ITGA3-203ENST00000504417 IQSEC2Q5JU85 1478 aa11.07□□□□□ -0.64
ITGA3-203ENST00000504417 TMEM131LA2VDJ0 1609 aa11.07□□□□□ -0.64
ITGA3-203ENST00000504417 CHIC2Q9UKJ5 165 aa11.07□□□□□ -0.64
ITGA3-203ENST00000504417 ILDR1Q86SU0 546 aaPredicted RBP11.06□□□□□ -0.64
ITGA3-203ENST00000504417 FAM50AQ14320 339 aaKnown RBP11.05□□□□□ -0.64
ITGA3-203ENST00000504417 ALKQ9UM73 1620 aa11.03□□□□□ -0.64
ITGA3-203ENST00000504417 PKD2Q13563 968 aa11.03□□□□□ -0.64
ITGA3-203ENST00000504417 NCKAP5LQ9HCH0 1330 aa11.03□□□□□ -0.64
ITGA3-203ENST00000504417 NAIPQ13075 1403 aa11.02□□□□□ -0.64
ITGA3-203ENST00000504417 KANK1Q14678 1352 aa11.02□□□□□ -0.65
ITGA3-203ENST00000504417 SCAF11Q99590 1463 aaKnown RBP11.01□□□□□ -0.65
ITGA3-203ENST00000504417 PPARGC1BQ86YN6 1023 aaKnown RBP11.01□□□□□ -0.65
ITGA3-203ENST00000504417 FBXO41Q8TF61 875 aa11.01□□□□□ -0.65
ITGA3-203ENST00000504417 HFM1A2PYH4 1435 aa11.01□□□□□ -0.65
ITGA3-203ENST00000504417 NPHP4O75161 1426 aaPredicted RBP11.01□□□□□ -0.65
ITGA3-203ENST00000504417 CHD2O14647 1828 aaKnown RBP11□□□□□ -0.65
Retrieved 100 of 20,778 RNA–protein pairs in 38.8 ms