RNA–Protein interactions for RNA: ENST00000504309.5

SDHA-204, Transcript of succinate dehydrogenase complex flavoprotein subunit A, humanhuman

TSL 5 BASIC

Gene SDHA, Length 2,067 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SDHA-204ENST00000504309 INO80Q9ULG1 1556 aaPredicted RBP25.04■■□□□ 1.6
SDHA-204ENST00000504309 FANCAO15360 1455 aa25.03■■□□□ 1.6
SDHA-204ENST00000504309 TRPM1Q7Z4N2 1603 aa25.03■■□□□ 1.6
SDHA-204ENST00000504309 ASXL2Q76L83 1435 aa25.01■■□□□ 1.6
SDHA-204ENST00000504309 DEPDC5O75140 1603 aa25.01■■□□□ 1.59
SDHA-204ENST00000504309 RTEL1-TNFRSF6BF6WH68 1400 aa25■■□□□ 1.59
SDHA-204ENST00000504309 E9PCH4 1651 aa25■■□□□ 1.59
SDHA-204ENST00000504309 ATP7AQ04656 1500 aa24.99■■□□□ 1.59
SDHA-204ENST00000504309 DCAF11Q8TEB1 546 aa24.98■■□□□ 1.59
SDHA-204ENST00000504309 SPAG9O60271 1321 aaKnown RBP24.98■■□□□ 1.59
SDHA-204ENST00000504309 KDM2AQ9Y2K7 1162 aa24.98■■□□□ 1.59
SDHA-204ENST00000504309 ATP10AO60312 1499 aa24.97■■□□□ 1.59
SDHA-204ENST00000504309 AFAP1Q8N556 730 aa24.97■■□□□ 1.59
SDHA-204ENST00000504309 A2MP01023 1474 aa24.96■■□□□ 1.59
SDHA-204ENST00000504309 ADGRL1O94910 1474 aa24.95■■□□□ 1.58
SDHA-204ENST00000504309 PRAG1Q86YV5 1406 aa24.94■■□□□ 1.58
SDHA-204ENST00000504309 OSCARQ8IYS5 282 aa24.93■■□□□ 1.58
SDHA-204ENST00000504309 CARD11Q9BXL7 1154 aa24.93■■□□□ 1.58
SDHA-204ENST00000504309 SPHKAPQ2M3C7 1700 aa24.92■■□□□ 1.58
SDHA-204ENST00000504309 PRKRIP1Q9H875 184 aaPredicted RBP24.92■■□□□ 1.58
SDHA-204ENST00000504309 SUPT16HQ9Y5B9 1047 aaKnown RBP24.92■■□□□ 1.58
SDHA-204ENST00000504309 TET3O43151 1660 aa24.9■■□□□ 1.58
SDHA-204ENST00000504309 EIF2AK4Q9P2K8 1649 aaKnown RBP24.9■■□□□ 1.58
SDHA-204ENST00000504309 CEP152O94986 1710 aa24.89■■□□□ 1.58
SDHA-204ENST00000504309 LAMC1P11047 1609 aa24.89■■□□□ 1.58
SDHA-204ENST00000504309 ROCK2O75116 1388 aaKnown RBP24.89■■□□□ 1.57
SDHA-204ENST00000504309 SCAPERQ9BY12 1400 aa24.88■■□□□ 1.57
SDHA-204ENST00000504309 KIDINS220Q9ULH0 1771 aa24.88■■□□□ 1.57
SDHA-204ENST00000504309 RGL3Q3MIN7 710 aa24.87■■□□□ 1.57
SDHA-204ENST00000504309 ARID4BQ4LE39 1312 aaPredicted RBP24.86■■□□□ 1.57
SDHA-204ENST00000504309 CCDC184Q52MB2 194 aa24.86■■□□□ 1.57
SDHA-204ENST00000504309 TRPM2O94759 1503 aa24.86■■□□□ 1.57
SDHA-204ENST00000504309 DHX29Q7Z478 1369 aaKnown RBP24.86■■□□□ 1.57
SDHA-204ENST00000504309 VWDEQ8N2E2 1590 aa24.86■■□□□ 1.57
SDHA-204ENST00000504309 MROH1Q8NDA8 1641 aa24.85■■□□□ 1.57
SDHA-204ENST00000504309 PRDM15P57071 1507 aaPredicted RBP24.83■■□□□ 1.57
SDHA-204ENST00000504309 RNF17Q9BXT8 1623 aaKnown RBP24.83■■□□□ 1.57
SDHA-204ENST00000504309 CFAP74Q9C0B2 1584 aa24.83■■□□□ 1.56
SDHA-204ENST00000504309 ST20-MTHFSA0A0A6YYL1 179 aa24.82■■□□□ 1.56
SDHA-204ENST00000504309 POLR3GLQ9BT43 218 aa24.82■■□□□ 1.56
SDHA-204ENST00000504309 CLTCL1P53675 1640 aa24.82■■□□□ 1.56
SDHA-204ENST00000504309 GPRASP1Q5JY77 1395 aa24.8■■□□□ 1.56
SDHA-204ENST00000504309 HNRNPUQ00839 825 aaKnown RBP eCLIP24.79■■□□□ 1.56
SDHA-204ENST00000504309 MADDQ8WXG6 1647 aa24.78■■□□□ 1.56
SDHA-204ENST00000504309 ZNF518AQ6AHZ1 1483 aa24.77■■□□□ 1.56
SDHA-204ENST00000504309 NPM1P06748 294 aaKnown RBP eCLIP24.77■■□□□ 1.56
SDHA-204ENST00000504309 PTPRTO14522 1441 aa24.76■■□□□ 1.55
SDHA-204ENST00000504309 NBPF1Q3BBV0 1214 aa24.76■■□□□ 1.55
SDHA-204ENST00000504309 MRS2Q9HD23 443 aa24.75■■□□□ 1.55
SDHA-204ENST00000504309 MYT1LQ9UL68 1186 aa24.73■■□□□ 1.55
SDHA-204ENST00000504309 KANK1Q14678 1352 aa24.73■■□□□ 1.55
SDHA-204ENST00000504309 CD109Q6YHK3 1445 aa24.72■■□□□ 1.55
SDHA-204ENST00000504309 KIF3BO15066 747 aa24.71■■□□□ 1.55
SDHA-204ENST00000504309 PPRC1Q5VV67 1664 aaKnown RBP24.71■■□□□ 1.55
SDHA-204ENST00000504309 POGZQ7Z3K3 1410 aa24.7■■□□□ 1.54
SDHA-204ENST00000504309 EFCAB6Q5THR3 1501 aa24.7■■□□□ 1.54
SDHA-204ENST00000504309 HECW2Q9P2P5 1572 aa24.7■■□□□ 1.54
SDHA-204ENST00000504309 IQGAP1P46940 1657 aa24.7■■□□□ 1.54
SDHA-204ENST00000504309 COL17A1Q9UMD9 1497 aaPredicted RBP24.68■■□□□ 1.54
SDHA-204ENST00000504309 KIF1BO60333 1816 aa24.68■■□□□ 1.54
SDHA-204ENST00000504309 PELP1Q8IZL8 1130 aaKnown RBP24.68■■□□□ 1.54
SDHA-204ENST00000504309 FAM9BQ8IZU0 186 aa24.68■■□□□ 1.54
SDHA-204ENST00000504309 FRMPD1Q5SYB0 1578 aa24.66■■□□□ 1.54
SDHA-204ENST00000504309 ABCA6Q8N139 1617 aa24.66■■□□□ 1.54
SDHA-204ENST00000504309 CNGB1Q14028 1251 aaPredicted RBP24.65■■□□□ 1.54
SDHA-204ENST00000504309 UGGT1Q9NYU2 1555 aa24.65■■□□□ 1.54
SDHA-204ENST00000504309 NEURL4Q96JN8 1562 aa24.65■■□□□ 1.54
SDHA-204ENST00000504309 FKBP8Q14318 412 aa24.65■■□□□ 1.54
SDHA-204ENST00000504309 MROH2AA6NES4 1674 aa24.63■■□□□ 1.53
SDHA-204ENST00000504309 IFT172Q9UG01 1749 aa24.63■■□□□ 1.53
SDHA-204ENST00000504309 MLH3Q9UHC1 1453 aa24.62■■□□□ 1.53
SDHA-204ENST00000504309 LMTK2Q8IWU2 1503 aa24.62■■□□□ 1.53
SDHA-204ENST00000504309 DISP3Q9P2K9 1392 aa24.61■■□□□ 1.53
SDHA-204ENST00000504309 KIAA1210Q9ULL0 1709 aa24.61■■□□□ 1.53
SDHA-204ENST00000504309 TESK2Q96S53 571 aa24.6■■□□□ 1.53
SDHA-204ENST00000504309 CFAP65Q6ZU64 1925 aaKnown RBP24.6■■□□□ 1.53
SDHA-204ENST00000504309 MAP3K4Q9Y6R4 1608 aa24.58■■□□□ 1.53
SDHA-204ENST00000504309 NEFLP07196 543 aa24.57■■□□□ 1.52
SDHA-204ENST00000504309 NEO1Q92859 1461 aa24.57■■□□□ 1.52
SDHA-204ENST00000504309 BCANQ96GW7 911 aa24.57■■□□□ 1.52
SDHA-204ENST00000504309 RICTORQ6R327 1708 aa24.57■■□□□ 1.52
SDHA-204ENST00000504309 ZBED9Q6R2W3 1325 aa24.56■■□□□ 1.52
SDHA-204ENST00000504309 KTN1Q86UP2 1357 aaKnown RBP24.52■■□□□ 1.52
SDHA-204ENST00000504309 DIP2CQ9Y2E4 1556 aa24.51■■□□□ 1.51
SDHA-204ENST00000504309 MYOM2P54296 1465 aa24.51■■□□□ 1.51
SDHA-204ENST00000504309 STAC3Q96MF2 364 aa24.5■■□□□ 1.51
SDHA-204ENST00000504309 SCAF11Q99590 1463 aaKnown RBP24.5■■□□□ 1.51
SDHA-204ENST00000504309 CAMSAP1Q5T5Y3 1602 aa24.5■■□□□ 1.51
SDHA-204ENST00000504309 ADGRB3O60242 1522 aa24.49■■□□□ 1.51
SDHA-204ENST00000504309 RIMBP3CA6NJZ7 1639 aa24.48■■□□□ 1.51
SDHA-204ENST00000504309 RIMBP3BA6NNM3 1639 aa24.48■■□□□ 1.51
SDHA-204ENST00000504309 RIMBP3Q9UFD9 1639 aa24.48■■□□□ 1.51
SDHA-204ENST00000504309 MYBBP1AQ9BQG0 1328 aaKnown RBP24.48■■□□□ 1.51
SDHA-204ENST00000504309 NPATQ14207 1427 aa24.48■■□□□ 1.51
SDHA-204ENST00000504309 ABCC3O15438 1527 aa24.47■■□□□ 1.51
SDHA-204ENST00000504309 TMF1P82094 1093 aa24.47■■□□□ 1.51
SDHA-204ENST00000504309 RALBP1Q15311 655 aa24.47■■□□□ 1.51
SDHA-204ENST00000504309 PARD3Q8TEW0 1356 aa24.47■■□□□ 1.51
SDHA-204ENST00000504309 SIGLEC1Q9BZZ2 1709 aa24.47■■□□□ 1.51
SDHA-204ENST00000504309 PPLO60437 1756 aa24.47■■□□□ 1.51
Retrieved 100 of 20,778 RNA–protein pairs in 25.1 ms