RNA–Protein interactions for RNA: ENST00000504174.5

SSBP2-203, Transcript of single stranded DNA binding protein 2, humanhuman

TSL 5

Gene SSBP2, Length 632 nt, Biotype processed transcript, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SSBP2-203ENST00000504174 LRRC9Q6ZRR7 1453 aa36.49■■■■□ 3.43
SSBP2-203ENST00000504174 KDM5DQ9BY66 1539 aa36.48■■■■□ 3.43
SSBP2-203ENST00000504174 LOC105371045A0A1W2PR82 267 aa36.46■■■■□ 3.43
SSBP2-203ENST00000504174 A2ML1A8K2U0 1454 aa36.45■■■■□ 3.43
SSBP2-203ENST00000504174 TCOF1Q13428 1488 aaKnown RBP36.45■■■■□ 3.43
SSBP2-203ENST00000504174 WASHC2CQ9Y4E1 1318 aa36.43■■■■□ 3.42
SSBP2-203ENST00000504174 DNMT1P26358 1616 aaKnown RBP36.41■■■■□ 3.42
SSBP2-203ENST00000504174 PZPP20742 1482 aa36.4■■■■□ 3.42
SSBP2-203ENST00000504174 TNRQ92752 1358 aa36.4■■■■□ 3.42
SSBP2-203ENST00000504174 ZNF335Q9H4Z2 1342 aaPredicted RBP36.38■■■■□ 3.41
SSBP2-203ENST00000504174 MAP3K1Q13233 1512 aa36.38■■■■□ 3.41
SSBP2-203ENST00000504174 FBXO31Q5XUX0 539 aaPredicted RBP36.36■■■■□ 3.41
SSBP2-203ENST00000504174 MAST1Q9Y2H9 1570 aa36.33■■■■□ 3.41
SSBP2-203ENST00000504174 KANK4Q5T7N3 995 aaPredicted RBP36.3■■■■□ 3.4
SSBP2-203ENST00000504174 MIA2Q96PC5 1412 aa36.3■■■■□ 3.4
SSBP2-203ENST00000504174 POLR1AO95602 1720 aaPredicted RBP36.3■■■■□ 3.4
SSBP2-203ENST00000504174 MYOM3Q5VTT5 1437 aa36.28■■■■□ 3.4
SSBP2-203ENST00000504174 DISP3Q9P2K9 1392 aa36.27■■■■□ 3.4
SSBP2-203ENST00000504174 RNF17Q9BXT8 1623 aaKnown RBP36.26■■■■□ 3.4
SSBP2-203ENST00000504174 EIF2AK4Q9P2K8 1649 aaKnown RBP36.25■■■■□ 3.39
SSBP2-203ENST00000504174 ZC3H13Q5T200 1668 aaKnown RBP36.25■■■■□ 3.39
SSBP2-203ENST00000504174 NLRP1Q9C000 1473 aa36.24■■■■□ 3.39
SSBP2-203ENST00000504174 UBAP1LF5GYI3 381 aa36.21■■■■□ 3.39
SSBP2-203ENST00000504174 THEMISQ8N1K5 641 aaPredicted RBP36.21■■■■□ 3.39
SSBP2-203ENST00000504174 UGGT1Q9NYU2 1555 aa36.19■■■■□ 3.38
SSBP2-203ENST00000504174 ANKLE2Q86XL3 938 aa36.19■■■■□ 3.38
SSBP2-203ENST00000504174 NEURL4Q96JN8 1562 aa36.19■■■■□ 3.38
SSBP2-203ENST00000504174 APLP2Q06481 763 aa36.18■■■■□ 3.38
SSBP2-203ENST00000504174 ABCC3O15438 1527 aa36.18■■■■□ 3.38
SSBP2-203ENST00000504174 DROSHAQ9NRR4 1374 aaKnown RBP eCLIP36.17■■■■□ 3.387e-7■■■■□ 22.1
SSBP2-203ENST00000504174 DUOX2Q9NRD8 1548 aa36.13■■■■□ 3.38
SSBP2-203ENST00000504174 SPATA31D1Q6ZQQ2 1576 aa36.12■■■■□ 3.37
SSBP2-203ENST00000504174 CPS1P31327 1500 aa36.11■■■■□ 3.37
SSBP2-203ENST00000504174 DEPDC5O75140 1603 aa36.09■■■■□ 3.37
SSBP2-203ENST00000504174 MROH1Q8NDA8 1641 aa36.09■■■■□ 3.37
SSBP2-203ENST00000504174 SHANK2Q9UPX8 1470 aa36.08■■■■□ 3.37
SSBP2-203ENST00000504174 CEP152O94986 1710 aa36.08■■■■□ 3.37
SSBP2-203ENST00000504174 CROCC2H7BZ55 1655 aa36.07■■■■□ 3.36
SSBP2-203ENST00000504174 PTPN23Q9H3S7 1636 aa36.06■■■■□ 3.36
SSBP2-203ENST00000504174 NPHP4O75161 1426 aaPredicted RBP36.06■■■■□ 3.36
SSBP2-203ENST00000504174 ERVK-7P63135 1459 aa36.05■■■■□ 3.36
SSBP2-203ENST00000504174 MED14O60244 1454 aa36.05■■■■□ 3.36
SSBP2-203ENST00000504174 KIF15Q9NS87 1388 aa36.03■■■■□ 3.36
SSBP2-203ENST00000504174 ABCC5O15440 1437 aa36■■■■□ 3.35
SSBP2-203ENST00000504174 ERBINQ96RT1 1412 aa36■■■■□ 3.35
SSBP2-203ENST00000504174 ILDR2Q71H61 639 aa36■■■■□ 3.35
SSBP2-203ENST00000504174 IQGAP1P46940 1657 aa36■■■■□ 3.35
SSBP2-203ENST00000504174 VWDEQ8N2E2 1590 aa35.98■■■■□ 3.35
SSBP2-203ENST00000504174 RRP7BPQ9NSQ0 103 aa35.98■■■■□ 3.35
SSBP2-203ENST00000504174 CFAP65Q6ZU64 1925 aaKnown RBP35.97■■■■□ 3.35
SSBP2-203ENST00000504174 TOM1O60784 492 aa35.97■■■■□ 3.35
SSBP2-203ENST00000504174 PRDM15P57071 1507 aaPredicted RBP35.97■■■■□ 3.35
SSBP2-203ENST00000504174 SCAF1Q9H7N4 1312 aaKnown RBP35.96■■■■□ 3.35
SSBP2-203ENST00000504174 DAPK1P53355 1430 aa35.95■■■■□ 3.35
SSBP2-203ENST00000504174 FGD6Q6ZV73 1430 aa35.94■■■■□ 3.34
SSBP2-203ENST00000504174 UBR1Q8IWV7 1749 aa35.93■■■■□ 3.34
SSBP2-203ENST00000504174 ARHGAP31Q2M1Z3 1444 aa35.91■■■■□ 3.34
SSBP2-203ENST00000504174 PIP4K2BP78356 416 aa35.91■■■■□ 3.34
SSBP2-203ENST00000504174 KANK1Q14678 1352 aa35.89■■■■□ 3.34
SSBP2-203ENST00000504174 GRWD1Q9BQ67 446 aaKnown RBP eCLIP35.89■■■■□ 3.34
SSBP2-203ENST00000504174 SOCS7O14512 581 aa35.87■■■■□ 3.33
SSBP2-203ENST00000504174 ANKRD30AQ9BXX3 1397 aa35.87■■■■□ 3.33
SSBP2-203ENST00000504174 SCAF11Q99590 1463 aaKnown RBP35.83■■■■□ 3.33
SSBP2-203ENST00000504174 CHIC2Q9UKJ5 165 aa35.82■■■■□ 3.32
SSBP2-203ENST00000504174 SLIT1O75093 1534 aa35.79■■■■□ 3.32
SSBP2-203ENST00000504174 HSPA1LP34931 641 aa35.79■■■■□ 3.32
SSBP2-203ENST00000504174 SYNMO15061 1565 aa35.79■■■■□ 3.32
SSBP2-203ENST00000504174 STRCP1A6NGW2 1772 aa35.78■■■■□ 3.32
SSBP2-203ENST00000504174 TXNDC2Q86VQ3 553 aa35.77■■■■□ 3.32
SSBP2-203ENST00000504174 EID1Q9Y6B2 187 aa35.77■■■■□ 3.32
SSBP2-203ENST00000504174 ARHGAP23Q9P227 1491 aa35.77■■■■□ 3.32
SSBP2-203ENST00000504174 STAG3Q9UJ98 1225 aa35.75■■■■□ 3.31
SSBP2-203ENST00000504174 PIK3C2BO00750 1634 aa35.75■■■■□ 3.31
SSBP2-203ENST00000504174 LMTK2Q8IWU2 1503 aa35.74■■■■□ 3.31
SSBP2-203ENST00000504174 LRRC7Q96NW7 1537 aa35.74■■■■□ 3.31
SSBP2-203ENST00000504174 LTKP29376 864 aa35.72■■■■□ 3.31
SSBP2-203ENST00000504174 KDM5AP29375 1690 aaKnown RBP35.68■■■■□ 3.3
SSBP2-203ENST00000504174 FAM50AQ14320 339 aaKnown RBP35.68■■■■□ 3.3
SSBP2-203ENST00000504174 ALKQ9UM73 1620 aa35.68■■■■□ 3.3
SSBP2-203ENST00000504174 ADGRL2O95490 1459 aa35.67■■■■□ 3.3
SSBP2-203ENST00000504174 TMEM2Q9UHN6 1383 aa35.67■■■■□ 3.3
SSBP2-203ENST00000504174 EFCAB6Q5THR3 1501 aa35.65■■■■□ 3.3
SSBP2-203ENST00000504174 MED1Q15648 1581 aaPredicted RBP35.63■■■■□ 3.29
SSBP2-203ENST00000504174 IDI1Q13907 227 aa35.62■■■■□ 3.29
SSBP2-203ENST00000504174 NOS1P29475 1434 aa35.57■■■■□ 3.28
SSBP2-203ENST00000504174 ANKRD50Q9ULJ7 1429 aa35.57■■■■□ 3.28
SSBP2-203ENST00000504174 ADGRB3O60242 1522 aa35.53■■■■□ 3.28
SSBP2-203ENST00000504174 SLC52A1Q9NWF4 448 aa35.53■■■■□ 3.28
SSBP2-203ENST00000504174 RPRD2Q5VT52 1461 aaKnown RBP35.52■■■■□ 3.28
SSBP2-203ENST00000504174 XIRP1Q702N8 1843 aaKnown RBP35.5■■■■□ 3.27
SSBP2-203ENST00000504174 SENP3Q9H4L4 574 aaPredicted RBP35.5■■■■□ 3.27
SSBP2-203ENST00000504174 TET3O43151 1660 aa35.46■■■■□ 3.27
SSBP2-203ENST00000504174 PHF23Q9BUL5 403 aaPredicted RBP35.45■■■■□ 3.27
SSBP2-203ENST00000504174 KCNA6P17658 529 aa35.44■■■■□ 3.26
SSBP2-203ENST00000504174 SLC26A8Q96RN1 970 aa35.43■■■■□ 3.26
SSBP2-203ENST00000504174 BCANQ96GW7 911 aa35.42■■■■□ 3.26
SSBP2-203ENST00000504174 GCC2Q8IWJ2 1684 aa35.42■■■■□ 3.26
SSBP2-203ENST00000504174 TMEM94Q12767 1356 aa35.39■■■■□ 3.26
SSBP2-203ENST00000504174 UNC13BO14795 1591 aa35.39■■■■□ 3.26
SSBP2-203ENST00000504174 HDGFP51858 240 aaKnown RBP35.37■■■■□ 3.25
Retrieved 100 of 20,778 RNA–protein pairs in 24.5 ms